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STRUCTURAL
BIOLOGY
Volume 60
|
Part 1
|
January 2004
|
Pages 61–65
https://doi.org/10.1107/S0907444903021899
Open
access
ISSN: 2059-7983
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STRUCTURAL
BIOLOGY
Volume 60
|
Part 1
|
January 2004
|
Pages 61–65
https://doi.org/10.1107/S0907444903021899
Open
access
ISSN: 2059-7983
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data_1R3Z # _entry.id 1R3Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1R3Z pdb_00001r3z 10.2210/pdb1r3z/pdb NDB UD0044 ? ? RCSB RCSB020407 ? ? WWPDB D_1000020407 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-12-23 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1R3Z _pdbx_database_status.recvd_initial_deposition_date 2003-10-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1R41 _pdbx_database_related.details 'Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shi, K.' 1 'Pan, B.' 2 'Tippin, D.' 3 'Sundaralingam, M.' 4 # _citation.id primary _citation.title 'Structures of d(Gm5)CGm5CGCGC) and d(GCGCGm5CGm5C): effects of methylation on alternating DNA octamers.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 60 _citation.page_first 61 _citation.page_last 65 _citation.year 2004 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14684893 _citation.pdbx_database_id_DOI 10.1107/S0907444903021899 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, K.' 1 ? primary 'Pan, B.' 2 ? primary 'Tippin, D.' 3 ? primary 'Sundaralingam, M.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3'" 2456.647 1 ? ? ? ? 2 water nat water 18.015 25 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(5CM)(DG)(5CM)(DG)(DC)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCGCGCGC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 5CM n 1 3 DG n 1 4 5CM n 1 5 DG n 1 6 DC n 1 7 DG n 1 8 DC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'DNA Synthesizer' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG GUA A . n A 1 2 5CM 2 2 2 5CM CYM A . n A 1 3 DG 3 3 3 DG GUA A . n A 1 4 5CM 4 4 4 5CM CYM A . n A 1 5 DG 5 5 5 DG GUA A . n A 1 6 DC 6 6 6 DC CYT A . n A 1 7 DG 7 7 7 DG GUA A . n A 1 8 DC 8 8 8 DC CYT A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 101 101 HOH WAT A . B 2 HOH 2 102 102 HOH WAT A . B 2 HOH 3 103 103 HOH WAT A . B 2 HOH 4 105 105 HOH WAT A . B 2 HOH 5 106 106 HOH WAT A . B 2 HOH 6 107 107 HOH WAT A . B 2 HOH 7 108 108 HOH WAT A . B 2 HOH 8 109 109 HOH WAT A . B 2 HOH 9 110 110 HOH WAT A . B 2 HOH 10 111 111 HOH WAT A . B 2 HOH 11 112 112 HOH WAT A . B 2 HOH 12 113 113 HOH WAT A . B 2 HOH 13 114 114 HOH WAT A . B 2 HOH 14 115 115 HOH WAT A . B 2 HOH 15 116 116 HOH WAT A . B 2 HOH 16 117 117 HOH WAT A . B 2 HOH 17 118 118 HOH WAT A . B 2 HOH 18 119 119 HOH WAT A . B 2 HOH 19 120 120 HOH WAT A . B 2 HOH 20 121 121 HOH WAT A . B 2 HOH 21 122 122 HOH WAT A . B 2 HOH 22 123 123 HOH WAT A . B 2 HOH 23 124 124 HOH WAT A . B 2 HOH 24 125 125 HOH WAT A . B 2 HOH 25 126 126 HOH WAT A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SCALEPACK 'data scaling' . ? 1 CNS refinement . ? 2 CNS phasing . ? 3 # _cell.entry_id 1R3Z _cell.length_a 42.97 _cell.length_b 42.97 _cell.length_c 24.93 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.entry_id 1R3Z _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 96 _symmetry.cell_setting ? # _exptl.entry_id 1R3Z _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.43 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'cacodylate, magnesium chloride, spermine tetrachloride, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 cacodylate ? ? ? 1 2 1 'magnesium chloride' ? ? ? 1 3 1 'spermine tetrachloride' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 cacodylate ? ? ? 1 6 2 'magnesium chloride' ? ? ? 1 7 2 'spermine tetrachloride' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1R3Z _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 10 _reflns.number_all 2799 _reflns.number_obs 2540 _reflns.percent_possible_obs 90.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 90.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1R3Z _refine.ls_d_res_high 1.7 _refine.ls_d_res_low 10 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 2540 _refine.ls_number_reflns_obs 2311 _refine.ls_number_reflns_R_free 229 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all 0.193 _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_R_work 0.17 _refine.ls_R_factor_R_free 0.203 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'Molecular Placement' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 163 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 188 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 10 # _database_PDB_matrix.entry_id 1R3Z _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1R3Z _struct.title 'Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R3Z _struct_keywords.pdbx_keywords DNA _struct_keywords.text DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1R3Z _struct_ref.pdbx_db_accession 1R3Z _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1R3Z _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1R3Z _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A 5CM 2 P ? ? A DG 1 A 5CM 2 1_555 ? ? ? ? ? ? ? 1.626 ? ? covale2 covale both ? A 5CM 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A 5CM 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.618 ? ? covale3 covale both ? A DG 3 "O3'" ? ? ? 1_555 A 5CM 4 P ? ? A DG 3 A 5CM 4 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale4 covale both ? A 5CM 4 "O3'" ? ? ? 1_555 A DG 5 P ? ? A 5CM 4 A DG 5 1_555 ? ? ? ? ? ? ? 1.612 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A 5CM 2 N3 ? ? ? 1_555 A DG 7 N1 ? ? A 5CM 2 A DG 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A 5CM 2 N4 ? ? ? 1_555 A DG 7 O6 ? ? A 5CM 2 A DG 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A 5CM 2 O2 ? ? ? 1_555 A DG 7 N2 ? ? A 5CM 2 A DG 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 3 A DC 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 3 A DC 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 3 A DC 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A 5CM 4 N3 ? ? ? 1_555 A DG 5 N1 ? ? A 5CM 4 A DG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 5CM 4 N4 ? ? ? 1_555 A DG 5 O6 ? ? A 5CM 4 A DG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A 5CM 4 O2 ? ? ? 1_555 A DG 5 N2 ? ? A 5CM 4 A DG 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A 5CM 4 N3 ? ? A DG 5 A 5CM 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A 5CM 4 O2 ? ? A DG 5 A 5CM 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A 5CM 4 N4 ? ? A DG 5 A 5CM 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 6 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 6 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 6 A DG 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A 5CM 2 N3 ? ? A DG 7 A 5CM 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A 5CM 2 O2 ? ? A DG 7 A 5CM 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A 5CM 2 N4 ? ? A DG 7 A 5CM 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C6 A DG 3 ? ? O6 A DG 3 ? ? 1.182 1.237 -0.055 0.009 N 2 1 N3 A DG 7 ? ? C4 A DG 7 ? ? 1.292 1.350 -0.058 0.007 N 3 1 C8 A DG 7 ? ? N9 A DG 7 ? ? 1.323 1.374 -0.051 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O3'" A DG 3 ? ? P A 5CM 4 ? ? OP2 A 5CM 4 ? ? 120.02 110.50 9.52 1.10 Y 2 1 "O3'" A DC 6 ? ? P A DG 7 ? ? OP2 A DG 7 ? ? 118.41 110.50 7.91 1.10 Y # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5CM 2 A 5CM 2 ? DC ? 2 A 5CM 4 A 5CM 4 ? DC ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 HOH O O N N 109 HOH H1 H N N 110 HOH H2 H N N 111 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 HOH O H1 sing N N 113 HOH O H2 sing N N 114 # _ndb_struct_conf_na.entry_id 1R3Z _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 8 7_555 -0.310 -0.147 -0.143 -7.232 -6.785 -1.936 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1 1 A 5CM 2 1_555 A DG 7 7_555 0.281 -0.184 -0.069 4.987 -13.021 2.458 2 A_5CM2:DG7_A A 2 ? A 7 ? 19 1 1 A DG 3 1_555 A DC 6 7_555 -0.219 -0.164 0.007 -4.715 -13.738 1.153 3 A_DG3:DC6_A A 3 ? A 6 ? 19 1 1 A 5CM 4 1_555 A DG 5 7_555 0.180 -0.127 0.203 -4.702 -6.515 0.688 4 A_5CM4:DG5_A A 4 ? A 5 ? 19 1 1 A DG 5 1_555 A 5CM 4 7_555 -0.180 -0.127 0.203 4.702 -6.515 0.688 5 A_DG5:5CM4_A A 5 ? A 4 ? 19 1 1 A DC 6 1_555 A DG 3 7_555 0.219 -0.164 0.007 4.715 -13.738 1.153 6 A_DC6:DG3_A A 6 ? A 3 ? 19 1 1 A DG 7 1_555 A 5CM 2 7_555 -0.281 -0.184 -0.069 -4.987 -13.021 2.458 7 A_DG7:5CM2_A A 7 ? A 2 ? 19 1 1 A DC 8 1_555 A DG 1 7_555 0.310 -0.147 -0.143 7.232 -6.785 -1.936 8 A_DC8:DG1_A A 8 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 8 7_555 A 5CM 2 1_555 A DG 7 7_555 0.426 -1.168 3.104 0.235 6.212 34.822 -2.766 -0.669 2.863 10.279 -0.388 35.355 1 AA_DG15CM2:DG7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ? 1 A 5CM 2 1_555 A DG 7 7_555 A DG 3 1_555 A DC 6 7_555 0.018 -1.635 3.517 -0.094 10.886 28.812 -5.188 -0.052 2.733 20.957 0.180 30.760 2 AA_5CM2DG3:DC6DG7_AA A 2 ? A 7 ? A 3 ? A 6 ? 1 A DG 3 1_555 A DC 6 7_555 A 5CM 4 1_555 A DG 5 7_555 0.158 -1.478 3.357 -0.235 1.430 38.109 -2.446 -0.271 3.301 2.189 0.359 38.135 3 AA_DG35CM4:DG5DC6_AA A 3 ? A 6 ? A 4 ? A 5 ? 1 A 5CM 4 1_555 A DG 5 7_555 A DG 5 1_555 A 5CM 4 7_555 0.000 -1.944 3.091 0.000 5.293 21.535 -6.810 0.000 2.545 13.896 0.000 22.168 4 AA_5CM4DG5:5CM4DG5_AA A 4 ? A 5 ? A 5 ? A 4 ? 1 A DG 5 1_555 A 5CM 4 7_555 A DC 6 1_555 A DG 3 7_555 -0.158 -1.478 3.357 0.235 1.430 38.109 -2.446 0.271 3.301 2.189 -0.359 38.135 5 AA_DG5DC6:DG35CM4_AA A 5 ? A 4 ? A 6 ? A 3 ? 1 A DC 6 1_555 A DG 3 7_555 A DG 7 1_555 A 5CM 2 7_555 -0.018 -1.635 3.517 0.094 10.886 28.812 -5.188 0.052 2.733 20.957 -0.180 30.760 6 AA_DC6DG7:5CM2DG3_AA A 6 ? A 3 ? A 7 ? A 2 ? 1 A DG 7 1_555 A 5CM 2 7_555 A DC 8 1_555 A DG 1 7_555 -0.426 -1.168 3.104 -0.235 6.212 34.822 -2.766 0.669 2.863 10.279 0.388 35.355 7 AA_DG7DC8:DG15CM2_AA A 7 ? A 2 ? A 8 ? A 1 ? # _atom_sites.entry_id 1R3Z _atom_sites.fract_transf_matrix[1][1] 0.023272 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023272 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040112 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 28.811 19.388 -5.346 1.00 28.84 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 28.721 17.982 -5.073 1.00 28.56 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 29.893 17.340 -4.353 1.00 26.97 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 31.037 17.389 -5.224 1.00 25.23 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 30.337 18.053 -3.115 1.00 27.46 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 29.659 17.597 -1.968 1.00 30.48 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 31.834 17.769 -3.063 1.00 26.97 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 32.239 17.668 -4.489 1.00 24.67 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 32.742 18.974 -4.922 1.00 24.65 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 32.095 19.886 -5.723 1.00 22.69 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 32.840 20.968 -5.981 1.00 23.51 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 34.022 20.738 -5.272 1.00 22.92 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 35.223 21.527 -5.180 1.00 22.22 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 35.436 22.597 -5.715 1.00 23.81 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 36.220 20.892 -4.406 1.00 23.46 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 36.054 19.687 -3.808 1.00 23.61 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 37.094 19.207 -3.074 1.00 24.45 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 34.932 18.962 -3.885 1.00 24.65 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 33.982 19.527 -4.620 1.00 23.32 ? 1 DG A C4 1 HETATM 20 N N1 . 5CM A 1 2 ? 34.076 20.857 -0.789 1.00 27.25 ? 2 5CM A N1 1 HETATM 21 C C2 . 5CM A 1 2 ? 35.133 21.754 -1.081 1.00 27.08 ? 2 5CM A C2 1 HETATM 22 N N3 . 5CM A 1 2 ? 34.896 22.784 -1.931 1.00 23.92 ? 2 5CM A N3 1 HETATM 23 C C4 . 5CM A 1 2 ? 33.692 22.964 -2.459 1.00 23.79 ? 2 5CM A C4 1 HETATM 24 C C5 . 5CM A 1 2 ? 32.610 22.064 -2.185 1.00 25.02 ? 2 5CM A C5 1 HETATM 25 C C5A . 5CM A 1 2 ? 31.275 22.301 -2.821 1.00 25.37 ? 2 5CM A C5A 1 HETATM 26 C C6 . 5CM A 1 2 ? 32.849 21.056 -1.341 1.00 25.67 ? 2 5CM A C6 1 HETATM 27 O O2 . 5CM A 1 2 ? 36.255 21.539 -0.535 1.00 26.72 ? 2 5CM A O2 1 HETATM 28 N N4 . 5CM A 1 2 ? 33.483 24.013 -3.251 1.00 23.75 ? 2 5CM A N4 1 HETATM 29 C "C1'" . 5CM A 1 2 ? 34.352 19.721 0.109 1.00 28.41 ? 2 5CM A "C1'" 1 HETATM 30 C "C2'" . 5CM A 1 2 ? 34.160 20.139 1.557 1.00 29.46 ? 2 5CM A "C2'" 1 HETATM 31 C "C3'" . 5CM A 1 2 ? 32.726 19.761 1.836 1.00 30.20 ? 2 5CM A "C3'" 1 HETATM 32 C "C4'" . 5CM A 1 2 ? 32.627 18.450 1.072 1.00 29.61 ? 2 5CM A "C4'" 1 HETATM 33 O "O4'" . 5CM A 1 2 ? 33.355 18.708 -0.153 1.00 29.07 ? 2 5CM A "O4'" 1 HETATM 34 O "O3'" . 5CM A 1 2 ? 32.634 19.547 3.210 1.00 34.53 ? 2 5CM A "O3'" 1 HETATM 35 C "C5'" . 5CM A 1 2 ? 31.237 18.027 0.719 1.00 29.98 ? 2 5CM A "C5'" 1 HETATM 36 O "O5'" . 5CM A 1 2 ? 30.570 19.005 -0.020 1.00 29.99 ? 2 5CM A "O5'" 1 HETATM 37 P P . 5CM A 1 2 ? 29.236 18.650 -0.803 1.00 31.35 ? 2 5CM A P 1 HETATM 38 O OP1 . 5CM A 1 2 ? 28.466 17.872 0.187 1.00 34.44 ? 2 5CM A OP1 1 HETATM 39 O OP2 . 5CM A 1 2 ? 28.696 19.898 -1.405 1.00 30.10 ? 2 5CM A OP2 1 ATOM 40 P P . DG A 1 3 ? 32.080 20.753 4.136 1.00 37.16 ? 3 DG A P 1 ATOM 41 O OP1 . DG A 1 3 ? 31.820 20.065 5.428 1.00 38.26 ? 3 DG A OP1 1 ATOM 42 O OP2 . DG A 1 3 ? 31.024 21.527 3.473 1.00 36.93 ? 3 DG A OP2 1 ATOM 43 O "O5'" . DG A 1 3 ? 33.294 21.763 4.203 1.00 35.46 ? 3 DG A "O5'" 1 ATOM 44 C "C5'" . DG A 1 3 ? 34.317 21.544 5.098 1.00 35.36 ? 3 DG A "C5'" 1 ATOM 45 C "C4'" . DG A 1 3 ? 35.496 22.435 4.810 1.00 33.87 ? 3 DG A "C4'" 1 ATOM 46 O "O4'" . DG A 1 3 ? 35.649 22.445 3.390 1.00 32.82 ? 3 DG A "O4'" 1 ATOM 47 C "C3'" . DG A 1 3 ? 35.273 23.900 5.138 1.00 34.32 ? 3 DG A "C3'" 1 ATOM 48 O "O3'" . DG A 1 3 ? 35.627 24.194 6.478 1.00 35.47 ? 3 DG A "O3'" 1 ATOM 49 C "C2'" . DG A 1 3 ? 36.300 24.572 4.249 1.00 31.00 ? 3 DG A "C2'" 1 ATOM 50 C "C1'" . DG A 1 3 ? 36.326 23.676 3.006 1.00 30.77 ? 3 DG A "C1'" 1 ATOM 51 N N9 . DG A 1 3 ? 35.464 24.361 2.046 1.00 26.72 ? 3 DG A N9 1 ATOM 52 C C8 . DG A 1 3 ? 34.204 24.025 1.678 1.00 25.11 ? 3 DG A C8 1 ATOM 53 N N7 . DG A 1 3 ? 33.735 24.781 0.717 1.00 24.78 ? 3 DG A N7 1 ATOM 54 C C5 . DG A 1 3 ? 34.741 25.677 0.463 1.00 22.49 ? 3 DG A C5 1 ATOM 55 C C6 . DG A 1 3 ? 34.763 26.745 -0.431 1.00 21.31 ? 3 DG A C6 1 ATOM 56 O O6 . DG A 1 3 ? 33.931 27.068 -1.206 1.00 22.13 ? 3 DG A O6 1 ATOM 57 N N1 . DG A 1 3 ? 35.915 27.491 -0.309 1.00 19.60 ? 3 DG A N1 1 ATOM 58 C C2 . DG A 1 3 ? 36.921 27.234 0.601 1.00 21.55 ? 3 DG A C2 1 ATOM 59 N N2 . DG A 1 3 ? 37.956 28.093 0.609 1.00 21.17 ? 3 DG A N2 1 ATOM 60 N N3 . DG A 1 3 ? 36.924 26.185 1.444 1.00 23.10 ? 3 DG A N3 1 ATOM 61 C C4 . DG A 1 3 ? 35.800 25.469 1.310 1.00 25.53 ? 3 DG A C4 1 HETATM 62 N N1 . 5CM A 1 4 ? 35.777 29.126 3.483 1.00 24.09 ? 4 5CM A N1 1 HETATM 63 C C2 . 5CM A 1 4 ? 35.508 30.002 2.451 1.00 21.62 ? 4 5CM A C2 1 HETATM 64 N N3 . 5CM A 1 4 ? 34.362 29.852 1.696 1.00 21.64 ? 4 5CM A N3 1 HETATM 65 C C4 . 5CM A 1 4 ? 33.503 28.887 1.999 1.00 20.13 ? 4 5CM A C4 1 HETATM 66 C C5 . 5CM A 1 4 ? 33.757 27.979 3.074 1.00 24.07 ? 4 5CM A C5 1 HETATM 67 C C5A . 5CM A 1 4 ? 32.774 26.894 3.385 1.00 24.64 ? 4 5CM A C5A 1 HETATM 68 C C6 . 5CM A 1 4 ? 34.902 28.138 3.782 1.00 22.25 ? 4 5CM A C6 1 HETATM 69 O O2 . 5CM A 1 4 ? 36.321 30.891 2.259 1.00 20.40 ? 4 5CM A O2 1 HETATM 70 N N4 . 5CM A 1 4 ? 32.331 28.796 1.256 1.00 21.06 ? 4 5CM A N4 1 HETATM 71 C "C1'" . 5CM A 1 4 ? 37.056 29.317 4.215 1.00 26.59 ? 4 5CM A "C1'" 1 HETATM 72 C "C2'" . 5CM A 1 4 ? 36.792 30.272 5.397 1.00 26.39 ? 4 5CM A "C2'" 1 HETATM 73 C "C3'" . 5CM A 1 4 ? 36.595 29.350 6.577 1.00 28.12 ? 4 5CM A "C3'" 1 HETATM 74 C "C4'" . 5CM A 1 4 ? 37.511 28.185 6.243 1.00 28.92 ? 4 5CM A "C4'" 1 HETATM 75 O "O4'" . 5CM A 1 4 ? 37.433 28.063 4.797 1.00 26.91 ? 4 5CM A "O4'" 1 HETATM 76 O "O3'" . 5CM A 1 4 ? 37.033 30.001 7.781 1.00 29.08 ? 4 5CM A "O3'" 1 HETATM 77 C "C5'" . 5CM A 1 4 ? 37.023 26.917 6.893 1.00 30.16 ? 4 5CM A "C5'" 1 HETATM 78 O "O5'" . 5CM A 1 4 ? 35.664 26.691 6.607 1.00 32.98 ? 4 5CM A "O5'" 1 HETATM 79 P P . 5CM A 1 4 ? 34.935 25.440 7.234 1.00 35.63 ? 4 5CM A P 1 HETATM 80 O OP1 . 5CM A 1 4 ? 35.503 25.294 8.633 1.00 38.19 ? 4 5CM A OP1 1 HETATM 81 O OP2 . 5CM A 1 4 ? 33.467 25.687 7.081 1.00 34.99 ? 4 5CM A OP2 1 ATOM 82 P P . DG A 1 5 ? 36.052 31.061 8.497 1.00 29.81 ? 5 DG A P 1 ATOM 83 O OP1 . DG A 1 5 ? 36.649 31.231 9.799 1.00 33.04 ? 5 DG A OP1 1 ATOM 84 O OP2 . DG A 1 5 ? 34.667 30.644 8.382 1.00 31.10 ? 5 DG A OP2 1 ATOM 85 O "O5'" . DG A 1 5 ? 36.340 32.320 7.625 1.00 27.53 ? 5 DG A "O5'" 1 ATOM 86 C "C5'" . DG A 1 5 ? 35.346 33.295 7.410 1.00 25.99 ? 5 DG A "C5'" 1 ATOM 87 C "C4'" . DG A 1 5 ? 35.849 34.219 6.350 1.00 24.03 ? 5 DG A "C4'" 1 ATOM 88 O "O4'" . DG A 1 5 ? 35.807 33.383 5.153 1.00 22.54 ? 5 DG A "O4'" 1 ATOM 89 C "C3'" . DG A 1 5 ? 34.834 35.311 6.068 1.00 22.95 ? 5 DG A "C3'" 1 ATOM 90 O "O3'" . DG A 1 5 ? 35.207 36.466 6.800 1.00 26.01 ? 5 DG A "O3'" 1 ATOM 91 C "C2'" . DG A 1 5 ? 34.979 35.529 4.561 1.00 22.51 ? 5 DG A "C2'" 1 ATOM 92 C "C1'" . DG A 1 5 ? 35.285 34.126 4.049 1.00 19.99 ? 5 DG A "C1'" 1 ATOM 93 N N9 . DG A 1 5 ? 34.044 33.489 3.640 1.00 18.30 ? 5 DG A N9 1 ATOM 94 C C8 . DG A 1 5 ? 33.412 32.425 4.219 1.00 19.46 ? 5 DG A C8 1 ATOM 95 N N7 . DG A 1 5 ? 32.389 31.991 3.540 1.00 19.19 ? 5 DG A N7 1 ATOM 96 C C5 . DG A 1 5 ? 32.312 32.857 2.445 1.00 18.94 ? 5 DG A C5 1 ATOM 97 C C6 . DG A 1 5 ? 31.369 32.937 1.365 1.00 19.91 ? 5 DG A C6 1 ATOM 98 O O6 . DG A 1 5 ? 30.427 32.177 1.096 1.00 20.72 ? 5 DG A O6 1 ATOM 99 N N1 . DG A 1 5 ? 31.615 34.034 0.547 1.00 18.23 ? 5 DG A N1 1 ATOM 100 C C2 . DG A 1 5 ? 32.672 34.910 0.712 1.00 19.92 ? 5 DG A C2 1 ATOM 101 N N2 . DG A 1 5 ? 32.829 35.904 -0.226 1.00 20.27 ? 5 DG A N2 1 ATOM 102 N N3 . DG A 1 5 ? 33.548 34.829 1.708 1.00 20.71 ? 5 DG A N3 1 ATOM 103 C C4 . DG A 1 5 ? 33.304 33.803 2.510 1.00 18.40 ? 5 DG A C4 1 ATOM 104 P P . DC A 1 6 ? 34.045 37.399 7.381 1.00 27.52 ? 6 DC A P 1 ATOM 105 O OP1 . DC A 1 6 ? 34.803 38.320 8.280 1.00 31.62 ? 6 DC A OP1 1 ATOM 106 O OP2 . DC A 1 6 ? 32.892 36.600 7.845 1.00 27.13 ? 6 DC A OP2 1 ATOM 107 O "O5'" . DC A 1 6 ? 33.586 38.201 6.120 1.00 26.43 ? 6 DC A "O5'" 1 ATOM 108 C "C5'" . DC A 1 6 ? 34.424 39.091 5.507 1.00 26.90 ? 6 DC A "C5'" 1 ATOM 109 C "C4'" . DC A 1 6 ? 33.774 39.620 4.250 1.00 25.73 ? 6 DC A "C4'" 1 ATOM 110 O "O4'" . DC A 1 6 ? 33.600 38.518 3.298 1.00 24.77 ? 6 DC A "O4'" 1 ATOM 111 C "C3'" . DC A 1 6 ? 32.341 40.163 4.398 1.00 26.76 ? 6 DC A "C3'" 1 ATOM 112 O "O3'" . DC A 1 6 ? 32.270 41.550 4.776 1.00 31.80 ? 6 DC A "O3'" 1 ATOM 113 C "C2'" . DC A 1 6 ? 31.805 40.018 2.993 1.00 23.06 ? 6 DC A "C2'" 1 ATOM 114 C "C1'" . DC A 1 6 ? 32.425 38.726 2.504 1.00 23.17 ? 6 DC A "C1'" 1 ATOM 115 N N1 . DC A 1 6 ? 31.506 37.648 2.790 1.00 21.95 ? 6 DC A N1 1 ATOM 116 C C2 . DC A 1 6 ? 30.492 37.361 1.926 1.00 20.80 ? 6 DC A C2 1 ATOM 117 O O2 . DC A 1 6 ? 30.330 38.101 0.943 1.00 24.35 ? 6 DC A O2 1 ATOM 118 N N3 . DC A 1 6 ? 29.651 36.282 2.140 1.00 19.62 ? 6 DC A N3 1 ATOM 119 C C4 . DC A 1 6 ? 29.829 35.538 3.199 1.00 20.57 ? 6 DC A C4 1 ATOM 120 N N4 . DC A 1 6 ? 29.037 34.452 3.327 1.00 19.66 ? 6 DC A N4 1 ATOM 121 C C5 . DC A 1 6 ? 30.840 35.837 4.175 1.00 19.75 ? 6 DC A C5 1 ATOM 122 C C6 . DC A 1 6 ? 31.668 36.897 3.927 1.00 21.58 ? 6 DC A C6 1 ATOM 123 P P . DG A 1 7 ? 31.018 42.022 5.658 1.00 31.26 ? 7 DG A P 1 ATOM 124 O OP1 . DG A 1 7 ? 31.455 43.351 6.157 1.00 34.69 ? 7 DG A OP1 1 ATOM 125 O OP2 . DG A 1 7 ? 30.402 41.039 6.603 1.00 31.03 ? 7 DG A OP2 1 ATOM 126 O "O5'" . DG A 1 7 ? 29.858 42.158 4.550 1.00 29.08 ? 7 DG A "O5'" 1 ATOM 127 C "C5'" . DG A 1 7 ? 29.996 43.055 3.500 1.00 26.86 ? 7 DG A "C5'" 1 ATOM 128 C "C4'" . DG A 1 7 ? 28.834 42.907 2.542 1.00 25.03 ? 7 DG A "C4'" 1 ATOM 129 O "O4'" . DG A 1 7 ? 28.893 41.558 2.077 1.00 23.65 ? 7 DG A "O4'" 1 ATOM 130 C "C3'" . DG A 1 7 ? 27.427 43.037 3.133 1.00 26.28 ? 7 DG A "C3'" 1 ATOM 131 O "O3'" . DG A 1 7 ? 27.005 44.388 3.044 1.00 30.10 ? 7 DG A "O3'" 1 ATOM 132 C "C2'" . DG A 1 7 ? 26.583 42.163 2.196 1.00 24.57 ? 7 DG A "C2'" 1 ATOM 133 C "C1'" . DG A 1 7 ? 27.597 41.110 1.703 1.00 22.50 ? 7 DG A "C1'" 1 ATOM 134 N N9 . DG A 1 7 ? 27.333 39.925 2.475 1.00 19.04 ? 7 DG A N9 1 ATOM 135 C C8 . DG A 1 7 ? 28.003 39.440 3.508 1.00 17.90 ? 7 DG A C8 1 ATOM 136 N N7 . DG A 1 7 ? 27.512 38.297 3.968 1.00 16.99 ? 7 DG A N7 1 ATOM 137 C C5 . DG A 1 7 ? 26.450 38.020 3.142 1.00 17.95 ? 7 DG A C5 1 ATOM 138 C C6 . DG A 1 7 ? 25.601 36.907 3.112 1.00 20.10 ? 7 DG A C6 1 ATOM 139 O O6 . DG A 1 7 ? 25.633 35.892 3.820 1.00 21.56 ? 7 DG A O6 1 ATOM 140 N N1 . DG A 1 7 ? 24.655 37.013 2.154 1.00 21.61 ? 7 DG A N1 1 ATOM 141 C C2 . DG A 1 7 ? 24.528 38.094 1.330 1.00 22.91 ? 7 DG A C2 1 ATOM 142 N N2 . DG A 1 7 ? 23.515 38.063 0.482 1.00 24.88 ? 7 DG A N2 1 ATOM 143 N N3 . DG A 1 7 ? 25.362 39.166 1.337 1.00 20.65 ? 7 DG A N3 1 ATOM 144 C C4 . DG A 1 7 ? 26.273 39.034 2.244 1.00 19.38 ? 7 DG A C4 1 ATOM 145 P P . DC A 1 8 ? 25.912 44.901 4.064 1.00 31.65 ? 8 DC A P 1 ATOM 146 O OP1 . DC A 1 8 ? 26.036 46.369 3.751 1.00 34.80 ? 8 DC A OP1 1 ATOM 147 O OP2 . DC A 1 8 ? 26.262 44.392 5.368 1.00 34.60 ? 8 DC A OP2 1 ATOM 148 O "O5'" . DC A 1 8 ? 24.535 44.291 3.643 1.00 32.29 ? 8 DC A "O5'" 1 ATOM 149 C "C5'" . DC A 1 8 ? 24.053 44.674 2.341 1.00 35.60 ? 8 DC A "C5'" 1 ATOM 150 C "C4'" . DC A 1 8 ? 22.719 44.063 1.995 1.00 35.48 ? 8 DC A "C4'" 1 ATOM 151 O "O4'" . DC A 1 8 ? 22.897 42.643 1.978 1.00 35.78 ? 8 DC A "O4'" 1 ATOM 152 C "C3'" . DC A 1 8 ? 21.576 44.373 2.961 1.00 37.50 ? 8 DC A "C3'" 1 ATOM 153 O "O3'" . DC A 1 8 ? 20.489 44.660 2.104 1.00 42.54 ? 8 DC A "O3'" 1 ATOM 154 C "C2'" . DC A 1 8 ? 21.400 43.088 3.732 1.00 37.11 ? 8 DC A "C2'" 1 ATOM 155 C "C1'" . DC A 1 8 ? 21.882 42.018 2.749 1.00 34.63 ? 8 DC A "C1'" 1 ATOM 156 N N1 . DC A 1 8 ? 22.510 40.915 3.523 1.00 29.53 ? 8 DC A N1 1 ATOM 157 C C2 . DC A 1 8 ? 21.904 39.619 3.499 1.00 28.21 ? 8 DC A C2 1 ATOM 158 O O2 . DC A 1 8 ? 20.919 39.427 2.763 1.00 27.49 ? 8 DC A O2 1 ATOM 159 N N3 . DC A 1 8 ? 22.443 38.632 4.280 1.00 23.37 ? 8 DC A N3 1 ATOM 160 C C4 . DC A 1 8 ? 23.523 38.908 5.042 1.00 22.89 ? 8 DC A C4 1 ATOM 161 N N4 . DC A 1 8 ? 24.023 37.943 5.830 1.00 22.70 ? 8 DC A N4 1 ATOM 162 C C5 . DC A 1 8 ? 24.172 40.199 5.033 1.00 23.82 ? 8 DC A C5 1 ATOM 163 C C6 . DC A 1 8 ? 23.615 41.151 4.270 1.00 26.74 ? 8 DC A C6 1 HETATM 164 O O . HOH B 2 . ? 24.270 41.190 -0.218 1.00 42.65 ? 101 HOH A O 1 HETATM 165 O O . HOH B 2 . ? 35.769 36.568 1.306 1.00 25.00 ? 102 HOH A O 1 HETATM 166 O O . HOH B 2 . ? 36.978 38.572 2.502 1.00 35.98 ? 103 HOH A O 1 HETATM 167 O O . HOH B 2 . ? 29.186 30.292 1.925 1.00 46.31 ? 105 HOH A O 1 HETATM 168 O O . HOH B 2 . ? 34.218 24.618 -7.038 1.00 39.14 ? 106 HOH A O 1 HETATM 169 O O . HOH B 2 . ? 31.690 23.013 -7.507 1.00 46.97 ? 107 HOH A O 1 HETATM 170 O O . HOH B 2 . ? 31.478 26.664 -2.008 1.00 45.13 ? 108 HOH A O 1 HETATM 171 O O . HOH B 2 . ? 31.041 24.716 0.016 1.00 40.00 ? 109 HOH A O 1 HETATM 172 O O . HOH B 2 . ? 26.809 34.937 5.927 1.00 42.66 ? 110 HOH A O 1 HETATM 173 O O . HOH B 2 . ? 26.243 38.542 7.593 1.00 32.46 ? 111 HOH A O 1 HETATM 174 O O . HOH B 2 . ? 29.990 22.288 0.968 1.00 53.55 ? 112 HOH A O 1 HETATM 175 O O . HOH B 2 . ? 38.073 38.434 5.031 1.00 39.14 ? 113 HOH A O 1 HETATM 176 O O . HOH B 2 . ? 27.625 20.783 -3.498 1.00 44.77 ? 114 HOH A O 1 HETATM 177 O O . HOH B 2 . ? 37.716 19.565 0.653 1.00 56.75 ? 115 HOH A O 1 HETATM 178 O O . HOH B 2 . ? 30.059 38.247 7.055 1.00 45.46 ? 116 HOH A O 1 HETATM 179 O O . HOH B 2 . ? 31.619 34.301 7.119 1.00 51.82 ? 117 HOH A O 1 HETATM 180 O O . HOH B 2 . ? 28.222 36.958 6.232 1.00 34.88 ? 118 HOH A O 1 HETATM 181 O O . HOH B 2 . ? 25.909 42.511 7.225 1.00 51.23 ? 119 HOH A O 1 HETATM 182 O O . HOH B 2 . ? 38.786 29.338 10.297 1.00 62.18 ? 120 HOH A O 1 HETATM 183 O O . HOH B 2 . ? 31.318 24.731 6.406 1.00 54.80 ? 121 HOH A O 1 HETATM 184 O O . HOH B 2 . ? 28.712 19.802 -7.930 1.00 51.79 ? 122 HOH A O 1 HETATM 185 O O . HOH B 2 . ? 32.980 28.434 6.772 1.00 51.60 ? 123 HOH A O 1 HETATM 186 O O . HOH B 2 . ? 37.147 22.714 9.335 1.00 64.07 ? 124 HOH A O 1 HETATM 187 O O . HOH B 2 . ? 29.902 26.813 1.047 1.00 46.44 ? 125 HOH A O 1 HETATM 188 O O . HOH B 2 . ? 39.436 39.549 1.212 1.00 61.31 ? 126 HOH A O 1 #
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