Acta Crystallographica Section D
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STRUCTURAL
BIOLOGY
Volume 71
|
Part 10
|
October 2015
|
Pages 2119–2126
https://doi.org/10.1107/S1399004715013930
Open
access
ISSN: 2059-7983
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STRUCTURAL
BIOLOGY
Volume 71
|
Part 10
|
October 2015
|
Pages 2119–2126
https://doi.org/10.1107/S1399004715013930
Open
access
ISSN: 2059-7983
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data_4ZKK # _entry.id 4ZKK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ZKK pdb_00004zkk 10.2210/pdb4zkk/pdb WWPDB D_1000209451 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-14 2 'Structure model' 1 1 2016-01-20 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 9 3 'Structure model' '_pdbx_struct_conn_angle.value' 10 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 11 3 'Structure model' '_struct_conn.pdbx_dist_value' 12 3 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 13 3 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 14 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 15 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4ZKK _pdbx_database_status.recvd_initial_deposition_date 2015-04-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thirugnanasambandam, A.' 1 'Karthik, S.' 2 'Mandal, P.K.' 3 'Gautham, N.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_id_ASTM ABCRE6 _citation.journal_id_CSD ? _citation.journal_id_ISSN 1399-0047 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 71 _citation.language ? _citation.page_first 2119 _citation.page_last 2126 _citation.title 'The novel double-folded structure of d(GCATGCATGC): a possible model for triplet-repeat sequences' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S1399004715013930 _citation.pdbx_database_id_PubMed 26457435 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thirugnanasambandam, A.' 1 ? primary 'Karthik, S.' 2 ? primary 'Mandal, P.K.' 3 ? primary 'Gautham, N.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*CP*AP*TP*GP*CP*AP*TP*GP*C)-3') ; 3045.005 1 ? ? ? ? 2 non-polymer syn 'COBALT (II) ION' 58.933 3 ? ? ? ? 3 water nat water 18.015 24 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DA)(DT)(DG)(DC)(DA)(DT)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCATGCATGC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 DC n 1 7 DA n 1 8 DT n 1 9 DG n 1 10 DC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DC 10 10 10 DC DC A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO 1 101 1 CO CO A . C 2 CO 1 102 2 CO CO A . D 2 CO 1 103 3 CO CO A . E 3 HOH 1 201 13 HOH HOH A . E 3 HOH 2 202 17 HOH HOH A . E 3 HOH 3 203 11 HOH HOH A . E 3 HOH 4 204 1 HOH HOH A . E 3 HOH 5 205 5 HOH HOH A . E 3 HOH 6 206 10 HOH HOH A . E 3 HOH 7 207 7 HOH HOH A . E 3 HOH 8 208 4 HOH HOH A . E 3 HOH 9 209 2 HOH HOH A . E 3 HOH 10 210 8 HOH HOH A . E 3 HOH 11 211 3 HOH HOH A . E 3 HOH 12 212 19 HOH HOH A . E 3 HOH 13 213 12 HOH HOH A . E 3 HOH 14 214 24 HOH HOH A . E 3 HOH 15 215 14 HOH HOH A . E 3 HOH 16 216 15 HOH HOH A . E 3 HOH 17 217 21 HOH HOH A . E 3 HOH 18 218 16 HOH HOH A . E 3 HOH 19 219 18 HOH HOH A . E 3 HOH 20 220 20 HOH HOH A . E 3 HOH 21 221 6 HOH HOH A . E 3 HOH 22 222 22 HOH HOH A . E 3 HOH 23 223 9 HOH HOH A . E 3 HOH 24 224 23 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? MxCuBE ? ? ? 2.0 2 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? 7.0.9 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? 7.0.9 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.2.14 6 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 4ZKK _cell.details ? _cell.formula_units_Z ? _cell.length_a 34.640 _cell.length_a_esd ? _cell.length_b 34.640 _cell.length_b_esd ? _cell.length_c 89.601 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZKK _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4ZKK _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.73 _exptl_crystal.description 'hexagonal bipyramidal' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1 mM DNA, 50 mM sodium cacodylate buffer, 10 mM cobalt chloride and equilibrated against 40% MPD' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Bent collimating mirror & toroid' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-07-19 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(III) monochromator' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.604 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.604 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4ZKK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 30.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5358 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 32 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 36.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 83.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.66 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 14.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4ZKK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.801 _refine.ls_d_res_low 24.927 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5358 _refine.ls_number_reflns_R_free 541 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.88 _refine.ls_percent_reflns_R_free 10.10 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2309 _refine.ls_R_factor_R_free 0.2463 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2291 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 0.31 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.21 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 229 _refine_hist.d_res_high 1.801 _refine_hist.d_res_low 24.927 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 226 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.557 ? 347 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 32.259 ? 96 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.024 ? 39 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 10 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.8006 1.9817 . . 124 1079 87.00 . . . 0.2940 . 0.2809 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9817 2.2683 . . 138 1227 98.00 . . . 0.3283 . 0.2766 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2683 2.8572 . . 139 1254 99.00 . . . 0.2780 . 0.2697 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8572 24.9292 . . 140 1257 100.00 . . . 0.2200 . 0.2015 . . . . . . . . . . # _struct.entry_id 4ZKK _struct.title 'The novel double-fold structure of d(GCATGCATGC)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4ZKK _struct_keywords.text 'folded, minor-groove tetrad, bi-loop, triplet, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4ZKK _struct_ref.pdbx_db_accession 4ZKK _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4ZKK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4ZKK _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1520 ? 1 MORE -41 ? 1 'SSA (A^2)' 3190 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 17.3200000000 0.0000000000 -1.0000000000 0.0000000000 29.9991199871 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 N7 ? ? ? 1_555 B CO . CO ? ? A DG 1 A CO 101 1_555 ? ? ? ? ? ? ? 2.194 ? ? metalc2 metalc ? ? A DG 5 N7 ? ? ? 1_555 C CO . CO A ? A DG 5 A CO 102 1_555 ? ? ? ? ? ? ? 2.433 ? ? metalc3 metalc ? ? A DG 5 N7 ? ? ? 1_555 C CO . CO B ? A DG 5 A CO 102 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc4 metalc ? ? A DG 9 N7 ? ? ? 1_555 B CO . CO ? ? A DG 9 A CO 101 1_555 ? ? ? ? ? ? ? 2.271 ? ? metalc5 metalc ? ? B CO . CO ? ? ? 1_555 E HOH . O ? ? A CO 101 A HOH 204 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc6 metalc ? ? B CO . CO ? ? ? 1_555 E HOH . O ? ? A CO 101 A HOH 207 4_665 ? ? ? ? ? ? ? 2.328 ? ? metalc7 metalc ? ? B CO . CO ? ? ? 1_555 E HOH . O ? ? A CO 101 A HOH 209 1_555 ? ? ? ? ? ? ? 2.041 ? ? metalc8 metalc ? ? B CO . CO ? ? ? 1_555 E HOH . O ? ? A CO 101 A HOH 211 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc9 metalc ? ? C CO . CO A ? ? 1_555 E HOH . O ? ? A CO 102 A HOH 215 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc10 metalc ? ? C CO . CO B ? ? 1_555 E HOH . O ? ? A CO 102 A HOH 215 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc11 metalc ? ? C CO . CO A ? ? 1_555 E HOH . O ? ? A CO 102 A HOH 218 1_555 ? ? ? ? ? ? ? 2.777 ? ? metalc12 metalc ? ? C CO . CO B ? ? 1_555 E HOH . O ? ? A CO 102 A HOH 218 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc13 metalc ? ? C CO . CO A ? ? 1_555 E HOH . O A ? A CO 102 A HOH 223 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc14 metalc ? ? C CO . CO B ? ? 1_555 E HOH . O B ? A CO 102 A HOH 223 1_555 ? ? ? ? ? ? ? 2.491 ? ? metalc15 metalc ? ? D CO . CO ? ? ? 1_555 E HOH . O B ? A CO 103 A HOH 201 8_665 ? ? ? ? ? ? ? 2.283 ? ? metalc16 metalc ? ? D CO . CO ? ? ? 1_555 E HOH . O ? ? A CO 103 A HOH 217 1_555 ? ? ? ? ? ? ? 1.728 ? ? metalc17 metalc ? ? D CO . CO ? ? ? 1_555 E HOH . O ? ? A CO 103 A HOH 219 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc18 metalc ? ? D CO . CO ? ? ? 1_555 E HOH . O ? ? A CO 103 A HOH 219 11_655 ? ? ? ? ? ? ? 2.567 ? ? hydrog1 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 1 A DC 6 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 2 A DG 5 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 N7 ? A DG 9 ? A DG 9 ? 1_555 174.5 ? 2 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 204 ? 1_555 92.1 ? 3 N7 ? A DG 9 ? A DG 9 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 204 ? 1_555 86.4 ? 4 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 207 ? 4_665 92.2 ? 5 N7 ? A DG 9 ? A DG 9 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 207 ? 4_665 93.1 ? 6 O ? E HOH . ? A HOH 204 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 207 ? 4_665 90.0 ? 7 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 209 ? 1_555 91.1 ? 8 N7 ? A DG 9 ? A DG 9 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 209 ? 1_555 90.8 ? 9 O ? E HOH . ? A HOH 204 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 209 ? 1_555 174.4 ? 10 O ? E HOH . ? A HOH 207 ? 4_665 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 209 ? 1_555 85.4 ? 11 N7 ? A DG 1 ? A DG 1 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 211 ? 1_555 91.1 ? 12 N7 ? A DG 9 ? A DG 9 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 211 ? 1_555 83.7 ? 13 O ? E HOH . ? A HOH 204 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 211 ? 1_555 93.6 ? 14 O ? E HOH . ? A HOH 207 ? 4_665 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 211 ? 1_555 175.0 ? 15 O ? E HOH . ? A HOH 209 ? 1_555 CO ? B CO . ? A CO 101 ? 1_555 O ? E HOH . ? A HOH 211 ? 1_555 90.8 ? 16 N7 ? A DG 5 ? A DG 5 ? 1_555 CO A C CO . ? A CO 102 ? 1_555 O ? E HOH . ? A HOH 215 ? 1_555 87.4 ? 17 N7 ? A DG 5 ? A DG 5 ? 1_555 CO A C CO . ? A CO 102 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 69.5 ? 18 O ? E HOH . ? A HOH 215 ? 1_555 CO A C CO . ? A CO 102 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 128.2 ? 19 N7 ? A DG 5 ? A DG 5 ? 1_555 CO A C CO . ? A CO 102 ? 1_555 O A E HOH . ? A HOH 223 ? 1_555 120.6 ? 20 O ? E HOH . ? A HOH 215 ? 1_555 CO A C CO . ? A CO 102 ? 1_555 O A E HOH . ? A HOH 223 ? 1_555 81.3 ? 21 O ? E HOH . ? A HOH 218 ? 1_555 CO A C CO . ? A CO 102 ? 1_555 O A E HOH . ? A HOH 223 ? 1_555 73.0 ? 22 N7 ? A DG 5 ? A DG 5 ? 1_555 CO B C CO . ? A CO 102 ? 1_555 O ? E HOH . ? A HOH 215 ? 1_555 90.0 ? 23 N7 ? A DG 5 ? A DG 5 ? 1_555 CO B C CO . ? A CO 102 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 82.9 ? 24 O ? E HOH . ? A HOH 215 ? 1_555 CO B C CO . ? A CO 102 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 160.8 ? 25 N7 ? A DG 5 ? A DG 5 ? 1_555 CO B C CO . ? A CO 102 ? 1_555 O B E HOH . ? A HOH 223 ? 1_555 137.9 ? 26 O ? E HOH . ? A HOH 215 ? 1_555 CO B C CO . ? A CO 102 ? 1_555 O B E HOH . ? A HOH 223 ? 1_555 69.5 ? 27 O ? E HOH . ? A HOH 218 ? 1_555 CO B C CO . ? A CO 102 ? 1_555 O B E HOH . ? A HOH 223 ? 1_555 104.4 ? 28 O B E HOH . ? A HOH 201 ? 8_665 CO ? D CO . ? A CO 103 ? 1_555 O ? E HOH . ? A HOH 217 ? 1_555 77.7 ? 29 O B E HOH . ? A HOH 201 ? 8_665 CO ? D CO . ? A CO 103 ? 1_555 O ? E HOH . ? A HOH 219 ? 1_555 68.7 ? 30 O ? E HOH . ? A HOH 217 ? 1_555 CO ? D CO . ? A CO 103 ? 1_555 O ? E HOH . ? A HOH 219 ? 1_555 98.2 ? 31 O B E HOH . ? A HOH 201 ? 8_665 CO ? D CO . ? A CO 103 ? 1_555 O ? E HOH . ? A HOH 219 ? 11_655 131.3 ? 32 O ? E HOH . ? A HOH 217 ? 1_555 CO ? D CO . ? A CO 103 ? 1_555 O ? E HOH . ? A HOH 219 ? 11_655 120.6 ? 33 O ? E HOH . ? A HOH 219 ? 1_555 CO ? D CO . ? A CO 103 ? 1_555 O ? E HOH . ? A HOH 219 ? 11_655 64.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CO 101 ? 6 'binding site for residue CO A 101' AC2 Software A CO 102 ? 7 'binding site for residue CO A 102' AC3 Software A CO 103 ? 6 'binding site for residue CO A 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DG A 1 ? DG A 1 . ? 1_555 ? 2 AC1 6 DG A 9 ? DG A 9 . ? 1_555 ? 3 AC1 6 HOH E . ? HOH A 204 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH A 207 . ? 4_665 ? 5 AC1 6 HOH E . ? HOH A 209 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 211 . ? 1_555 ? 7 AC2 7 DG A 5 ? DG A 5 . ? 1_555 ? 8 AC2 7 DC A 6 ? DC A 6 . ? 1_555 ? 9 AC2 7 HOH E . ? HOH A 202 . ? 1_555 ? 10 AC2 7 HOH E . ? HOH A 203 . ? 1_555 ? 11 AC2 7 HOH E . ? HOH A 215 . ? 1_555 ? 12 AC2 7 HOH E . ? HOH A 218 . ? 1_555 ? 13 AC2 7 HOH E . ? HOH A 223 . ? 1_555 ? 14 AC3 6 HOH E . ? HOH A 201 . ? 8_665 ? 15 AC3 6 HOH E . ? HOH A 201 . ? 4_665 ? 16 AC3 6 HOH E . ? HOH A 217 . ? 1_555 ? 17 AC3 6 HOH E . ? HOH A 217 . ? 11_655 ? 18 AC3 6 HOH E . ? HOH A 219 . ? 11_655 ? 19 AC3 6 HOH E . ? HOH A 219 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CO A CO 102 ? A O A HOH 202 ? ? 1.64 2 1 CO A CO 102 ? B O A HOH 203 ? ? 1.65 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CO 103 ? D CO . 2 1 A HOH 224 ? E HOH . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 6.0117 10.5724 -0.0368 0.0044 ? -0.0627 ? -0.0873 ? 0.5506 ? 0.0870 ? 0.1922 ? 0.0159 ? -0.0408 ? 0.0183 ? 0.1048 ? -0.0495 ? 0.0238 ? 0.0784 ? 0.0005 ? 0.0068 ? -0.0595 ? -0.0981 ? 0.0549 ? 0.1063 ? -0.0031 ? 0.0129 ? 2 'X-RAY DIFFRACTION' ? refined 11.1029 10.2505 0.9608 -0.0821 ? 0.1266 ? -0.0991 ? 0.8955 ? 0.0515 ? 0.2443 ? 0.0480 ? 0.0175 ? -0.0025 ? 0.0110 ? 0.0109 ? 0.0187 ? 0.0854 ? -0.0473 ? -0.0229 ? 0.0084 ? -0.0772 ? -0.1228 ? 0.1072 ? 0.0362 ? 0.0661 ? 3 'X-RAY DIFFRACTION' ? refined 12.8246 12.1571 -10.6452 0.1375 ? 0.0626 ? 0.0003 ? 0.4396 ? -0.0138 ? 0.3585 ? 0.0475 ? 0.0203 ? 0.0236 ? 0.0827 ? -0.0151 ? 0.0213 ? 0.0346 ? -0.1705 ? -0.0299 ? -0.0734 ? 0.1023 ? -0.1550 ? 0.0610 ? 0.1609 ? 0.0259 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 3 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 5 through 7 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 8 through 10 ) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CO CO CO N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4ZKK 'double helix' 4ZKK 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 6 1_555 -3.484 8.360 -0.132 -0.743 35.835 176.992 1 A_DG1:DC6_A A 1 ? A 6 ? ? ? 1 A DC 2 1_555 A DG 5 1_555 -3.526 -8.654 0.156 -4.835 -30.716 -178.301 2 A_DC2:DG5_A A 2 ? A 5 ? ? ? # _ndb_struct_na_base_pair_step.model_number 1 _ndb_struct_na_base_pair_step.i_label_asym_id_1 A _ndb_struct_na_base_pair_step.i_label_comp_id_1 DG _ndb_struct_na_base_pair_step.i_label_seq_id_1 1 _ndb_struct_na_base_pair_step.i_symmetry_1 1_555 _ndb_struct_na_base_pair_step.j_label_asym_id_1 A _ndb_struct_na_base_pair_step.j_label_comp_id_1 DC _ndb_struct_na_base_pair_step.j_label_seq_id_1 6 _ndb_struct_na_base_pair_step.j_symmetry_1 1_555 _ndb_struct_na_base_pair_step.i_label_asym_id_2 A _ndb_struct_na_base_pair_step.i_label_comp_id_2 DC _ndb_struct_na_base_pair_step.i_label_seq_id_2 2 _ndb_struct_na_base_pair_step.i_symmetry_2 1_555 _ndb_struct_na_base_pair_step.j_label_asym_id_2 A _ndb_struct_na_base_pair_step.j_label_comp_id_2 DG _ndb_struct_na_base_pair_step.j_label_seq_id_2 5 _ndb_struct_na_base_pair_step.j_symmetry_2 1_555 _ndb_struct_na_base_pair_step.shift -0.369 _ndb_struct_na_base_pair_step.slide -0.099 _ndb_struct_na_base_pair_step.rise 2.884 _ndb_struct_na_base_pair_step.tilt -3.585 _ndb_struct_na_base_pair_step.roll 0.270 _ndb_struct_na_base_pair_step.twist -150.347 _ndb_struct_na_base_pair_step.x_displacement 0.050 _ndb_struct_na_base_pair_step.y_displacement -0.203 _ndb_struct_na_base_pair_step.helical_rise 2.881 _ndb_struct_na_base_pair_step.inclination -0.140 _ndb_struct_na_base_pair_step.tip -1.854 _ndb_struct_na_base_pair_step.helical_twist -150.362 _ndb_struct_na_base_pair_step.step_number 1 _ndb_struct_na_base_pair_step.step_name AA_DG1DC2:DG5DC6_AA _ndb_struct_na_base_pair_step.i_auth_asym_id_1 A _ndb_struct_na_base_pair_step.i_auth_seq_id_1 1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 ? _ndb_struct_na_base_pair_step.j_auth_asym_id_1 A _ndb_struct_na_base_pair_step.j_auth_seq_id_1 6 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 ? _ndb_struct_na_base_pair_step.i_auth_asym_id_2 A _ndb_struct_na_base_pair_step.i_auth_seq_id_2 2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 ? _ndb_struct_na_base_pair_step.j_auth_asym_id_2 A _ndb_struct_na_base_pair_step.j_auth_seq_id_2 5 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 ? # _atom_sites.entry_id 4ZKK _atom_sites.fract_transf_matrix[1][1] 0.028868 _atom_sites.fract_transf_matrix[1][2] 0.016667 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033334 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011161 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 9.161 6.887 -5.847 1.00 42.79 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 9.971 6.278 -4.846 1.00 40.43 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 9.489 6.632 -3.446 1.00 37.08 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 9.811 8.008 -3.143 1.00 34.81 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 7.995 6.498 -3.206 1.00 37.37 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 7.768 6.143 -1.843 1.00 37.23 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 7.464 7.897 -3.526 1.00 32.01 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 8.638 8.803 -3.141 1.00 29.45 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 8.860 9.927 -4.057 1.00 26.05 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 8.766 9.918 -5.431 1.00 32.86 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 9.046 11.072 -5.979 1.00 20.41 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 9.356 11.893 -4.900 1.00 32.71 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 9.739 13.256 -4.868 1.00 29.74 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 9.890 14.032 -5.818 1.00 28.41 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 9.963 13.700 -3.564 1.00 29.30 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 9.828 12.927 -2.437 1.00 30.01 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 10.087 13.529 -1.264 1.00 29.34 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 9.471 11.651 -2.453 1.00 29.16 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 9.252 11.201 -3.714 1.00 26.18 ? 1 DG A C4 1 ATOM 20 P P . DC A 1 2 ? 6.280 5.864 -1.307 1.00 43.44 ? 2 DC A P 1 ATOM 21 O OP1 . DC A 1 2 ? 6.415 4.990 -0.119 1.00 45.71 ? 2 DC A OP1 1 ATOM 22 O OP2 . DC A 1 2 ? 5.439 5.429 -2.441 1.00 40.64 ? 2 DC A OP2 1 ATOM 23 O "O5'" . DC A 1 2 ? 5.778 7.299 -0.812 1.00 38.83 ? 2 DC A "O5'" 1 ATOM 24 C "C5'" . DC A 1 2 ? 6.368 7.891 0.341 1.00 40.58 ? 2 DC A "C5'" 1 ATOM 25 C "C4'" . DC A 1 2 ? 5.935 9.337 0.493 1.00 37.89 ? 2 DC A "C4'" 1 ATOM 26 O "O4'" . DC A 1 2 ? 6.459 10.113 -0.598 1.00 36.80 ? 2 DC A "O4'" 1 ATOM 27 C "C3'" . DC A 1 2 ? 4.422 9.564 0.469 1.00 38.49 ? 2 DC A "C3'" 1 ATOM 28 O "O3'" . DC A 1 2 ? 3.953 9.828 1.787 1.00 43.38 ? 2 DC A "O3'" 1 ATOM 29 C "C2'" . DC A 1 2 ? 4.224 10.779 -0.458 1.00 32.06 ? 2 DC A "C2'" 1 ATOM 30 C "C1'" . DC A 1 2 ? 5.649 11.242 -0.753 1.00 31.07 ? 2 DC A "C1'" 1 ATOM 31 N N1 . DC A 1 2 ? 5.839 11.765 -2.132 1.00 27.98 ? 2 DC A N1 1 ATOM 32 C C2 . DC A 1 2 ? 6.256 13.085 -2.315 1.00 28.39 ? 2 DC A C2 1 ATOM 33 O O2 . DC A 1 2 ? 6.452 13.798 -1.324 1.00 28.45 ? 2 DC A O2 1 ATOM 34 N N3 . DC A 1 2 ? 6.433 13.549 -3.577 1.00 24.69 ? 2 DC A N3 1 ATOM 35 C C4 . DC A 1 2 ? 6.209 12.747 -4.621 1.00 27.88 ? 2 DC A C4 1 ATOM 36 N N4 . DC A 1 2 ? 6.394 13.252 -5.843 1.00 22.50 ? 2 DC A N4 1 ATOM 37 C C5 . DC A 1 2 ? 5.784 11.396 -4.455 1.00 27.17 ? 2 DC A C5 1 ATOM 38 C C6 . DC A 1 2 ? 5.615 10.950 -3.203 1.00 28.37 ? 2 DC A C6 1 ATOM 39 P P . DA A 1 3 ? 2.771 8.943 2.419 1.00 39.37 ? 3 DA A P 1 ATOM 40 O OP1 . DA A 1 3 ? 2.927 7.553 1.939 1.00 41.22 ? 3 DA A OP1 1 ATOM 41 O OP2 . DA A 1 3 ? 1.499 9.663 2.193 1.00 39.26 ? 3 DA A OP2 1 ATOM 42 O "O5'" . DA A 1 3 ? 3.067 8.982 3.985 1.00 33.02 ? 3 DA A "O5'" 1 ATOM 43 C "C5'" . DA A 1 3 ? 4.313 8.529 4.483 1.00 32.38 ? 3 DA A "C5'" 1 ATOM 44 C "C4'" . DA A 1 3 ? 4.741 9.355 5.681 1.00 36.38 ? 3 DA A "C4'" 1 ATOM 45 O "O4'" . DA A 1 3 ? 5.086 10.694 5.243 1.00 39.25 ? 3 DA A "O4'" 1 ATOM 46 C "C3'" . DA A 1 3 ? 3.676 9.528 6.762 1.00 40.87 ? 3 DA A "C3'" 1 ATOM 47 O "O3'" . DA A 1 3 ? 4.288 9.520 8.043 1.00 46.63 ? 3 DA A "O3'" 1 ATOM 48 C "C2'" . DA A 1 3 ? 3.085 10.897 6.442 1.00 39.18 ? 3 DA A "C2'" 1 ATOM 49 C "C1'" . DA A 1 3 ? 4.315 11.643 5.946 1.00 39.87 ? 3 DA A "C1'" 1 ATOM 50 N N9 . DA A 1 3 ? 4.005 12.739 5.038 1.00 36.49 ? 3 DA A N9 1 ATOM 51 C C8 . DA A 1 3 ? 3.942 12.682 3.674 1.00 32.93 ? 3 DA A C8 1 ATOM 52 N N7 . DA A 1 3 ? 3.637 13.825 3.110 1.00 36.28 ? 3 DA A N7 1 ATOM 53 C C5 . DA A 1 3 ? 3.492 14.694 4.177 1.00 34.55 ? 3 DA A C5 1 ATOM 54 C C6 . DA A 1 3 ? 3.172 16.064 4.246 1.00 34.42 ? 3 DA A C6 1 ATOM 55 N N6 . DA A 1 3 ? 2.932 16.819 3.167 1.00 34.05 ? 3 DA A N6 1 ATOM 56 N N1 . DA A 1 3 ? 3.104 16.630 5.470 1.00 35.72 ? 3 DA A N1 1 ATOM 57 C C2 . DA A 1 3 ? 3.348 15.871 6.545 1.00 28.22 ? 3 DA A C2 1 ATOM 58 N N3 . DA A 1 3 ? 3.655 14.576 6.606 1.00 37.39 ? 3 DA A N3 1 ATOM 59 C C4 . DA A 1 3 ? 3.715 14.043 5.375 1.00 35.95 ? 3 DA A C4 1 ATOM 60 P P . DT A 1 4 ? 3.654 8.658 9.240 1.00 50.19 ? 4 DT A P 1 ATOM 61 O OP1 . DT A 1 4 ? 2.547 7.842 8.695 1.00 46.06 ? 4 DT A OP1 1 ATOM 62 O OP2 . DT A 1 4 ? 3.402 9.599 10.355 1.00 53.97 ? 4 DT A OP2 1 ATOM 63 O "O5'" . DT A 1 4 ? 4.842 7.681 9.673 1.00 92.66 ? 4 DT A "O5'" 1 ATOM 64 C "C5'" . DT A 1 4 ? 4.552 6.367 10.118 1.00 94.29 ? 4 DT A "C5'" 1 ATOM 65 C "C4'" . DT A 1 4 ? 5.551 5.376 9.554 1.00 96.70 ? 4 DT A "C4'" 1 ATOM 66 O "O4'" . DT A 1 4 ? 5.002 4.044 9.654 1.00 99.63 ? 4 DT A "O4'" 1 ATOM 67 C "C3'" . DT A 1 4 ? 5.845 5.540 8.078 1.00 97.49 ? 4 DT A "C3'" 1 ATOM 68 O "O3'" . DT A 1 4 ? 7.043 4.850 7.748 1.00 96.50 ? 4 DT A "O3'" 1 ATOM 69 C "C2'" . DT A 1 4 ? 4.633 4.858 7.457 1.00 99.97 ? 4 DT A "C2'" 1 ATOM 70 C "C1'" . DT A 1 4 ? 4.421 3.679 8.412 1.00 102.80 ? 4 DT A "C1'" 1 ATOM 71 N N1 . DT A 1 4 ? 2.990 3.358 8.648 1.00 108.08 ? 4 DT A N1 1 ATOM 72 C C2 . DT A 1 4 ? 2.616 2.047 8.827 1.00 109.62 ? 4 DT A C2 1 ATOM 73 O O2 . DT A 1 4 ? 3.403 1.118 8.801 1.00 108.54 ? 4 DT A O2 1 ATOM 74 N N3 . DT A 1 4 ? 1.277 1.860 9.041 1.00 111.90 ? 4 DT A N3 1 ATOM 75 C C4 . DT A 1 4 ? 0.295 2.833 9.091 1.00 112.92 ? 4 DT A C4 1 ATOM 76 O O4 . DT A 1 4 ? -0.886 2.565 9.289 1.00 113.97 ? 4 DT A O4 1 ATOM 77 C C5 . DT A 1 4 ? 0.757 4.188 8.896 1.00 111.67 ? 4 DT A C5 1 ATOM 78 C C7 . DT A 1 4 ? -0.215 5.330 8.929 1.00 110.85 ? 4 DT A C7 1 ATOM 79 C C6 . DT A 1 4 ? 2.066 4.381 8.686 1.00 110.48 ? 4 DT A C6 1 ATOM 80 P P . DG A 1 5 ? 8.283 5.634 7.093 1.00 53.25 ? 5 DG A P 1 ATOM 81 O OP1 . DG A 1 5 ? 9.182 4.617 6.505 1.00 58.02 ? 5 DG A OP1 1 ATOM 82 O OP2 . DG A 1 5 ? 8.812 6.587 8.092 1.00 49.96 ? 5 DG A OP2 1 ATOM 83 O "O5'" . DG A 1 5 ? 7.622 6.488 5.910 1.00 47.01 ? 5 DG A "O5'" 1 ATOM 84 C "C5'" . DG A 1 5 ? 7.163 5.842 4.732 1.00 46.01 ? 5 DG A "C5'" 1 ATOM 85 C "C4'" . DG A 1 5 ? 7.736 6.510 3.494 1.00 46.14 ? 5 DG A "C4'" 1 ATOM 86 O "O4'" . DG A 1 5 ? 7.403 7.923 3.505 1.00 44.50 ? 5 DG A "O4'" 1 ATOM 87 C "C3'" . DG A 1 5 ? 9.252 6.441 3.370 1.00 50.01 ? 5 DG A "C3'" 1 ATOM 88 O "O3'" . DG A 1 5 ? 9.615 6.337 2.004 1.00 51.20 ? 5 DG A "O3'" 1 ATOM 89 C "C2'" . DG A 1 5 ? 9.708 7.765 3.979 1.00 47.04 ? 5 DG A "C2'" 1 ATOM 90 C "C1'" . DG A 1 5 ? 8.581 8.705 3.567 1.00 42.53 ? 5 DG A "C1'" 1 ATOM 91 N N9 . DG A 1 5 ? 8.355 9.795 4.513 1.00 42.17 ? 5 DG A N9 1 ATOM 92 C C8 . DG A 1 5 ? 8.411 9.726 5.886 1.00 38.74 ? 5 DG A C8 1 ATOM 93 N N7 . DG A 1 5 ? 8.156 10.862 6.473 1.00 33.65 ? 5 DG A N7 1 ATOM 94 C C5 . DG A 1 5 ? 7.909 11.740 5.425 1.00 37.48 ? 5 DG A C5 1 ATOM 95 C C6 . DG A 1 5 ? 7.577 13.116 5.447 1.00 37.88 ? 5 DG A C6 1 ATOM 96 O O6 . DG A 1 5 ? 7.429 13.855 6.430 1.00 39.80 ? 5 DG A O6 1 ATOM 97 N N1 . DG A 1 5 ? 7.411 13.626 4.162 1.00 34.27 ? 5 DG A N1 1 ATOM 98 C C2 . DG A 1 5 ? 7.553 12.900 3.004 1.00 35.03 ? 5 DG A C2 1 ATOM 99 N N2 . DG A 1 5 ? 7.355 13.567 1.858 1.00 34.35 ? 5 DG A N2 1 ATOM 100 N N3 . DG A 1 5 ? 7.865 11.611 2.969 1.00 40.07 ? 5 DG A N3 1 ATOM 101 C C4 . DG A 1 5 ? 8.026 11.098 4.212 1.00 39.89 ? 5 DG A C4 1 ATOM 102 P P . DC A 1 6 ? 11.113 5.933 1.596 1.00 53.49 ? 6 DC A P 1 ATOM 103 O OP1 . DC A 1 6 ? 11.018 4.978 0.468 1.00 59.86 ? 6 DC A OP1 1 ATOM 104 O OP2 . DC A 1 6 ? 11.839 5.548 2.827 1.00 57.69 ? 6 DC A OP2 1 ATOM 105 O "O5'" . DC A 1 6 ? 11.731 7.304 1.059 1.00 52.88 ? 6 DC A "O5'" 1 ATOM 106 C "C5'" . DC A 1 6 ? 11.060 8.020 0.031 1.00 50.43 ? 6 DC A "C5'" 1 ATOM 107 C "C4'" . DC A 1 6 ? 11.533 9.460 -0.022 1.00 45.74 ? 6 DC A "C4'" 1 ATOM 108 O "O4'" . DC A 1 6 ? 10.944 10.213 1.058 1.00 40.01 ? 6 DC A "O4'" 1 ATOM 109 C "C3'" . DC A 1 6 ? 13.046 9.647 0.123 1.00 44.31 ? 6 DC A "C3'" 1 ATOM 110 O "O3'" . DC A 1 6 ? 13.597 10.065 -1.106 1.00 41.65 ? 6 DC A "O3'" 1 ATOM 111 C "C2'" . DC A 1 6 ? 13.200 10.731 1.204 1.00 43.48 ? 6 DC A "C2'" 1 ATOM 112 C "C1'" . DC A 1 6 ? 11.791 11.293 1.322 1.00 36.54 ? 6 DC A "C1'" 1 ATOM 113 N N1 . DC A 1 6 ? 11.481 11.839 2.668 1.00 37.31 ? 6 DC A N1 1 ATOM 114 C C2 . DC A 1 6 ? 11.021 13.152 2.783 1.00 37.69 ? 6 DC A C2 1 ATOM 115 O O2 . DC A 1 6 ? 10.866 13.827 1.754 1.00 37.98 ? 6 DC A O2 1 ATOM 116 N N3 . DC A 1 6 ? 10.746 13.646 4.014 1.00 34.24 ? 6 DC A N3 1 ATOM 117 C C4 . DC A 1 6 ? 10.929 12.883 5.096 1.00 36.92 ? 6 DC A C4 1 ATOM 118 N N4 . DC A 1 6 ? 10.649 13.412 6.290 1.00 35.90 ? 6 DC A N4 1 ATOM 119 C C5 . DC A 1 6 ? 11.404 11.541 4.999 1.00 35.15 ? 6 DC A C5 1 ATOM 120 C C6 . DC A 1 6 ? 11.667 11.066 3.775 1.00 34.26 ? 6 DC A C6 1 ATOM 121 P P . DA A 1 7 ? 14.756 9.203 -1.804 1.00 44.97 ? 7 DA A P 1 ATOM 122 O OP1 . DA A 1 7 ? 14.682 7.823 -1.276 1.00 43.53 ? 7 DA A OP1 1 ATOM 123 O OP2 . DA A 1 7 ? 16.011 9.980 -1.695 1.00 40.18 ? 7 DA A OP2 1 ATOM 124 O "O5'" . DA A 1 7 ? 14.316 9.162 -3.339 1.00 40.31 ? 7 DA A "O5'" 1 ATOM 125 C "C5'" . DA A 1 7 ? 13.039 8.648 -3.688 1.00 38.79 ? 7 DA A "C5'" 1 ATOM 126 C "C4'" . DA A 1 7 ? 12.468 9.390 -4.880 1.00 36.87 ? 7 DA A "C4'" 1 ATOM 127 O "O4'" . DA A 1 7 ? 12.136 10.748 -4.490 1.00 37.35 ? 7 DA A "O4'" 1 ATOM 128 C "C3'" . DA A 1 7 ? 13.409 9.502 -6.075 1.00 41.25 ? 7 DA A "C3'" 1 ATOM 129 O "O3'" . DA A 1 7 ? 12.683 9.314 -7.277 1.00 33.27 ? 7 DA A "O3'" 1 ATOM 130 C "C2'" . DA A 1 7 ? 13.958 10.924 -5.961 1.00 41.06 ? 7 DA A "C2'" 1 ATOM 131 C "C1'" . DA A 1 7 ? 12.785 11.669 -5.338 1.00 39.90 ? 7 DA A "C1'" 1 ATOM 132 N N9 . DA A 1 7 ? 13.193 12.826 -4.540 1.00 31.12 ? 7 DA A N9 1 ATOM 133 C C8 . DA A 1 7 ? 13.349 12.880 -3.182 1.00 40.00 ? 7 DA A C8 1 ATOM 134 N N7 . DA A 1 7 ? 13.733 14.056 -2.739 1.00 37.13 ? 7 DA A N7 1 ATOM 135 C C5 . DA A 1 7 ? 13.837 14.824 -3.890 1.00 37.45 ? 7 DA A C5 1 ATOM 136 C C6 . DA A 1 7 ? 14.201 16.169 -4.104 1.00 39.32 ? 7 DA A C6 1 ATOM 137 N N6 . DA A 1 7 ? 14.542 17.006 -3.118 1.00 45.14 ? 7 DA A N6 1 ATOM 138 N N1 . DA A 1 7 ? 14.201 16.622 -5.373 1.00 39.23 ? 7 DA A N1 1 ATOM 139 C C2 . DA A 1 7 ? 13.859 15.782 -6.359 1.00 39.03 ? 7 DA A C2 1 ATOM 140 N N3 . DA A 1 7 ? 13.495 14.503 -6.281 1.00 36.15 ? 7 DA A N3 1 ATOM 141 C C4 . DA A 1 7 ? 13.506 14.081 -5.006 1.00 32.68 ? 7 DA A C4 1 ATOM 142 P P . DT A 1 8 ? 12.283 7.833 -7.755 1.00 35.69 ? 8 DT A P 1 ATOM 143 O OP1 . DT A 1 8 ? 10.812 7.718 -7.693 1.00 31.74 ? 8 DT A OP1 1 ATOM 144 O OP2 . DT A 1 8 ? 13.133 6.876 -7.015 1.00 36.92 ? 8 DT A OP2 1 ATOM 145 O "O5'" . DT A 1 8 ? 12.722 7.789 -9.290 1.00 36.15 ? 8 DT A "O5'" 1 ATOM 146 C "C5'" . DT A 1 8 ? 14.097 7.823 -9.631 1.00 32.95 ? 8 DT A "C5'" 1 ATOM 147 C "C4'" . DT A 1 8 ? 14.313 8.620 -10.902 1.00 37.24 ? 8 DT A "C4'" 1 ATOM 148 O "O4'" . DT A 1 8 ? 13.564 8.015 -11.986 1.00 38.68 ? 8 DT A "O4'" 1 ATOM 149 C "C3'" . DT A 1 8 ? 13.859 10.072 -10.834 1.00 29.90 ? 8 DT A "C3'" 1 ATOM 150 O "O3'" . DT A 1 8 ? 14.761 10.889 -11.558 1.00 30.31 ? 8 DT A "O3'" 1 ATOM 151 C "C2'" . DT A 1 8 ? 12.477 10.038 -11.482 1.00 30.98 ? 8 DT A "C2'" 1 ATOM 152 C "C1'" . DT A 1 8 ? 12.648 8.943 -12.527 1.00 33.60 ? 8 DT A "C1'" 1 ATOM 153 N N1 . DT A 1 8 ? 11.389 8.215 -12.837 1.00 32.50 ? 8 DT A N1 1 ATOM 154 C C2 . DT A 1 8 ? 10.971 8.110 -14.144 1.00 30.68 ? 8 DT A C2 1 ATOM 155 O O2 . DT A 1 8 ? 11.581 8.592 -15.082 1.00 30.08 ? 8 DT A O2 1 ATOM 156 N N3 . DT A 1 8 ? 9.805 7.413 -14.316 1.00 29.79 ? 8 DT A N3 1 ATOM 157 C C4 . DT A 1 8 ? 9.031 6.824 -13.335 1.00 33.86 ? 8 DT A C4 1 ATOM 158 O O4 . DT A 1 8 ? 7.995 6.221 -13.590 1.00 36.70 ? 8 DT A O4 1 ATOM 159 C C5 . DT A 1 8 ? 9.525 6.970 -11.989 1.00 32.43 ? 8 DT A C5 1 ATOM 160 C C7 . DT A 1 8 ? 8.768 6.371 -10.840 1.00 34.74 ? 8 DT A C7 1 ATOM 161 C C6 . DT A 1 8 ? 10.667 7.648 -11.806 1.00 31.63 ? 8 DT A C6 1 ATOM 162 P P . DG A 1 9 ? 15.113 12.360 -11.026 1.00 31.09 ? 9 DG A P 1 ATOM 163 O OP1 . DG A 1 9 ? 16.378 12.783 -11.664 1.00 33.55 ? 9 DG A OP1 1 ATOM 164 O OP2 . DG A 1 9 ? 15.008 12.335 -9.546 1.00 32.14 ? 9 DG A OP2 1 ATOM 165 O "O5'" . DG A 1 9 ? 13.923 13.263 -11.586 1.00 29.37 ? 9 DG A "O5'" 1 ATOM 166 C "C5'" . DG A 1 9 ? 13.913 13.668 -12.942 1.00 30.03 ? 9 DG A "C5'" 1 ATOM 167 C "C4'" . DG A 1 9 ? 12.585 14.310 -13.286 1.00 24.56 ? 9 DG A "C4'" 1 ATOM 168 O "O4'" . DG A 1 9 ? 11.596 13.281 -13.452 1.00 25.85 ? 9 DG A "O4'" 1 ATOM 169 C "C3'" . DG A 1 9 ? 12.021 15.213 -12.205 1.00 26.21 ? 9 DG A "C3'" 1 ATOM 170 O "O3'" . DG A 1 9 ? 12.541 16.523 -12.362 1.00 31.71 ? 9 DG A "O3'" 1 ATOM 171 C "C2'" . DG A 1 9 ? 10.516 15.167 -12.479 1.00 24.75 ? 9 DG A "C2'" 1 ATOM 172 C "C1'" . DG A 1 9 ? 10.318 13.787 -13.123 1.00 24.82 ? 9 DG A "C1'" 1 ATOM 173 N N9 . DG A 1 9 ? 9.660 12.812 -12.259 1.00 26.82 ? 9 DG A N9 1 ATOM 174 C C8 . DG A 1 9 ? 9.685 12.767 -10.883 1.00 26.65 ? 9 DG A C8 1 ATOM 175 N N7 . DG A 1 9 ? 9.009 11.768 -10.384 1.00 26.30 ? 9 DG A N7 1 ATOM 176 C C5 . DG A 1 9 ? 8.502 11.111 -11.503 1.00 28.46 ? 9 DG A C5 1 ATOM 177 C C6 . DG A 1 9 ? 7.690 9.955 -11.594 1.00 28.54 ? 9 DG A C6 1 ATOM 178 O O6 . DG A 1 9 ? 7.243 9.258 -10.675 1.00 29.24 ? 9 DG A O6 1 ATOM 179 N N1 . DG A 1 9 ? 7.405 9.625 -12.920 1.00 27.95 ? 9 DG A N1 1 ATOM 180 C C2 . DG A 1 9 ? 7.853 10.320 -14.017 1.00 29.86 ? 9 DG A C2 1 ATOM 181 N N2 . DG A 1 9 ? 7.473 9.848 -15.217 1.00 30.69 ? 9 DG A N2 1 ATOM 182 N N3 . DG A 1 9 ? 8.612 11.406 -13.946 1.00 28.33 ? 9 DG A N3 1 ATOM 183 C C4 . DG A 1 9 ? 8.900 11.740 -12.662 1.00 24.90 ? 9 DG A C4 1 ATOM 184 P P . DC A 1 10 ? 12.864 17.429 -11.073 1.00 30.70 ? 10 DC A P 1 ATOM 185 O OP1 . DC A 1 10 ? 11.603 17.562 -10.318 1.00 25.80 ? 10 DC A OP1 1 ATOM 186 O OP2 . DC A 1 10 ? 13.577 18.634 -11.557 1.00 27.95 ? 10 DC A OP2 1 ATOM 187 O "O5'" . DC A 1 10 ? 13.868 16.540 -10.203 1.00 35.21 ? 10 DC A "O5'" 1 ATOM 188 C "C5'" . DC A 1 10 ? 15.162 16.233 -10.699 1.00 39.14 ? 10 DC A "C5'" 1 ATOM 189 C "C4'" . DC A 1 10 ? 16.240 16.920 -9.880 1.00 40.45 ? 10 DC A "C4'" 1 ATOM 190 O "O4'" . DC A 1 10 ? 15.980 16.722 -8.478 1.00 38.46 ? 10 DC A "O4'" 1 ATOM 191 C "C3'" . DC A 1 10 ? 17.637 16.372 -10.094 1.00 41.88 ? 10 DC A "C3'" 1 ATOM 192 O "O3'" . DC A 1 10 ? 18.252 17.033 -11.196 1.00 44.94 ? 10 DC A "O3'" 1 ATOM 193 C "C2'" . DC A 1 10 ? 18.345 16.697 -8.774 1.00 39.40 ? 10 DC A "C2'" 1 ATOM 194 C "C1'" . DC A 1 10 ? 17.197 16.769 -7.757 1.00 36.13 ? 10 DC A "C1'" 1 ATOM 195 N N1 . DC A 1 10 ? 17.193 15.657 -6.759 1.00 37.52 ? 10 DC A N1 1 ATOM 196 C C2 . DC A 1 10 ? 17.397 15.939 -5.401 1.00 37.61 ? 10 DC A C2 1 ATOM 197 O O2 . DC A 1 10 ? 17.594 17.110 -5.049 1.00 33.75 ? 10 DC A O2 1 ATOM 198 N N3 . DC A 1 10 ? 17.378 14.918 -4.509 1.00 38.30 ? 10 DC A N3 1 ATOM 199 C C4 . DC A 1 10 ? 17.161 13.670 -4.928 1.00 39.82 ? 10 DC A C4 1 ATOM 200 N N4 . DC A 1 10 ? 17.150 12.695 -4.013 1.00 42.05 ? 10 DC A N4 1 ATOM 201 C C5 . DC A 1 10 ? 16.946 13.365 -6.305 1.00 38.27 ? 10 DC A C5 1 ATOM 202 C C6 . DC A 1 10 ? 16.969 14.378 -7.174 1.00 36.83 ? 10 DC A C6 1 HETATM 203 CO CO . CO B 2 . ? 8.926 11.381 -8.148 1.00 27.51 ? 101 CO A CO 1 HETATM 204 CO CO A CO C 2 . ? 8.352 11.974 8.628 0.51 27.14 ? 102 CO A CO 1 HETATM 205 CO CO B CO C 2 . ? 8.328 10.466 8.680 0.49 26.63 ? 102 CO A CO 1 HETATM 206 CO CO . CO D 2 . ? 17.387 16.799 -0.056 0.50 71.33 ? 103 CO A CO 1 HETATM 207 O O A HOH E 3 . ? 0.697 11.722 2.413 0.70 29.38 ? 201 HOH A O 1 HETATM 208 O O B HOH E 3 . ? 0.518 12.855 2.267 0.30 25.97 ? 201 HOH A O 1 HETATM 209 O O . HOH E 3 . ? 8.335 13.613 8.512 1.00 49.08 ? 202 HOH A O 1 HETATM 210 O O . HOH E 3 . ? 8.344 8.823 8.863 1.00 45.30 ? 203 HOH A O 1 HETATM 211 O O . HOH E 3 . ? 8.829 13.466 -7.925 1.00 21.99 ? 204 HOH A O 1 HETATM 212 O O . HOH E 3 . ? 17.368 14.530 -13.088 1.00 40.30 ? 205 HOH A O 1 HETATM 213 O O . HOH E 3 . ? 12.674 13.518 -8.540 1.00 28.49 ? 206 HOH A O 1 HETATM 214 O O . HOH E 3 . ? 10.719 18.728 -8.124 1.00 27.16 ? 207 HOH A O 1 HETATM 215 O O . HOH E 3 . ? 10.556 15.468 -9.092 1.00 26.59 ? 208 HOH A O 1 HETATM 216 O O . HOH E 3 . ? 8.854 9.367 -8.472 1.00 28.20 ? 209 HOH A O 1 HETATM 217 O O . HOH E 3 . ? 9.091 6.833 -16.856 1.00 30.81 ? 210 HOH A O 1 HETATM 218 O O . HOH E 3 . ? 11.204 11.360 -8.321 1.00 25.23 ? 211 HOH A O 1 HETATM 219 O O . HOH E 3 . ? 16.306 10.297 -8.241 1.00 38.49 ? 212 HOH A O 1 HETATM 220 O O . HOH E 3 . ? 5.485 7.699 -13.410 1.00 45.29 ? 213 HOH A O 1 HETATM 221 O O . HOH E 3 . ? 2.627 19.212 6.471 1.00 44.91 ? 214 HOH A O 1 HETATM 222 O O . HOH E 3 . ? 6.181 11.388 9.011 1.00 41.48 ? 215 HOH A O 1 HETATM 223 O O . HOH E 3 . ? 4.744 13.770 9.141 1.00 35.45 ? 216 HOH A O 1 HETATM 224 O O . HOH E 3 . ? 15.914 17.500 -0.627 1.00 75.19 ? 217 HOH A O 1 HETATM 225 O O . HOH E 3 . ? 10.529 10.305 8.195 1.00 47.18 ? 218 HOH A O 1 HETATM 226 O O . HOH E 3 . ? 17.288 14.653 -1.352 1.00 65.71 ? 219 HOH A O 1 HETATM 227 O O . HOH E 3 . ? 16.803 9.231 -6.096 1.00 40.25 ? 220 HOH A O 1 HETATM 228 O O . HOH E 3 . ? 5.637 8.989 -7.124 1.00 39.82 ? 221 HOH A O 1 HETATM 229 O O . HOH E 3 . ? 11.733 12.356 10.056 1.00 71.31 ? 222 HOH A O 1 HETATM 230 O O A HOH E 3 . ? 8.667 10.698 10.634 0.51 33.87 ? 223 HOH A O 1 HETATM 231 O O B HOH E 3 . ? 8.257 11.768 10.802 0.49 35.44 ? 223 HOH A O 1 HETATM 232 O O . HOH E 3 . ? 17.420 9.941 -14.934 0.50 53.75 ? 224 HOH A O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 1 O "O5'" . DG A 1 ? 0.4168 0.7257 0.4835 -0.0272 -0.0400 0.0653 1 DG A "O5'" 2 C "C5'" . DG A 1 ? 0.3873 0.6966 0.4524 -0.0284 -0.0389 0.0667 1 DG A "C5'" 3 C "C4'" . DG A 1 ? 0.3444 0.6544 0.4101 -0.0315 -0.0379 0.0663 1 DG A "C4'" 4 O "O4'" . DG A 1 ? 0.3152 0.6265 0.3811 -0.0317 -0.0360 0.0671 1 DG A "O4'" 5 C "C3'" . DG A 1 ? 0.3477 0.6570 0.4153 -0.0334 -0.0395 0.0640 1 DG A "C3'" 6 O "O3'" . DG A 1 ? 0.3459 0.6552 0.4133 -0.0362 -0.0390 0.0639 1 DG A "O3'" 7 C "C2'" . DG A 1 ? 0.2789 0.5890 0.3482 -0.0332 -0.0389 0.0633 1 DG A "C2'" 8 C "C1'" . DG A 1 ? 0.2465 0.5579 0.3144 -0.0327 -0.0365 0.0654 1 DG A "C1'" 9 N N9 . DG A 1 ? 0.2030 0.5151 0.2715 -0.0307 -0.0358 0.0657 1 DG A N9 10 C C8 . DG A 1 ? 0.2893 0.6010 0.3583 -0.0282 -0.0369 0.0652 1 DG A C8 11 N N7 . DG A 1 ? 0.1312 0.4437 0.2006 -0.0268 -0.0359 0.0658 1 DG A N7 12 C C5 . DG A 1 ? 0.2867 0.6002 0.3557 -0.0285 -0.0340 0.0666 1 DG A C5 13 C C6 . DG A 1 ? 0.2488 0.5633 0.3178 -0.0280 -0.0324 0.0675 1 DG A C6 14 O O6 . DG A 1 ? 0.2317 0.5466 0.3012 -0.0261 -0.0322 0.0677 1 DG A O6 15 N N1 . DG A 1 ? 0.2432 0.5583 0.3116 -0.0301 -0.0311 0.0681 1 DG A N1 16 C C2 . DG A 1 ? 0.2526 0.5673 0.3204 -0.0323 -0.0313 0.0680 1 DG A C2 17 N N2 . DG A 1 ? 0.2441 0.5593 0.3112 -0.0340 -0.0300 0.0687 1 DG A N2 18 N N3 . DG A 1 ? 0.2421 0.5559 0.3099 -0.0328 -0.0327 0.0672 1 DG A N3 19 C C4 . DG A 1 ? 0.2044 0.5176 0.2728 -0.0308 -0.0340 0.0666 1 DG A C4 20 P P . DC A 2 ? 0.4242 0.7328 0.4934 -0.0385 -0.0403 0.0617 2 DC A P 21 O OP1 . DC A 2 ? 0.4534 0.7618 0.5216 -0.0407 -0.0401 0.0621 2 DC A OP1 22 O OP2 . DC A 2 ? 0.3887 0.6961 0.4593 -0.0373 -0.0427 0.0601 2 DC A OP2 23 O "O5'" . DC A 2 ? 0.3650 0.6747 0.4356 -0.0396 -0.0390 0.0612 2 DC A "O5'" 24 C "C5'" . DC A 2 ? 0.3872 0.6979 0.4566 -0.0410 -0.0370 0.0624 2 DC A "C5'" 25 C "C4'" . DC A 2 ? 0.3524 0.6640 0.4231 -0.0413 -0.0360 0.0620 2 DC A "C4'" 26 O "O4'" . DC A 2 ? 0.3385 0.6506 0.4092 -0.0389 -0.0356 0.0626 2 DC A "O4'" 27 C "C3'" . DC A 2 ? 0.3594 0.6706 0.4326 -0.0426 -0.0372 0.0597 2 DC A "C3'" 28 O "O3'" . DC A 2 ? 0.4212 0.7326 0.4945 -0.0451 -0.0365 0.0593 2 DC A "O3'" 29 C "C2'" . DC A 2 ? 0.2773 0.5891 0.3518 -0.0410 -0.0370 0.0593 2 DC A "C2'" 30 C "C1'" . DC A 2 ? 0.2652 0.5777 0.3377 -0.0391 -0.0355 0.0615 2 DC A "C1'" 31 N N1 . DC A 2 ? 0.2258 0.5384 0.2989 -0.0366 -0.0358 0.0615 2 DC A N1 32 C C2 . DC A 2 ? 0.2307 0.5443 0.3037 -0.0357 -0.0344 0.0623 2 DC A C2 33 O O2 . DC A 2 ? 0.2314 0.5456 0.3039 -0.0370 -0.0330 0.0628 2 DC A O2 34 N N3 . DC A 2 ? 0.1837 0.4974 0.2572 -0.0333 -0.0346 0.0624 2 DC A N3 35 C C4 . DC A 2 ? 0.2242 0.5371 0.2981 -0.0318 -0.0363 0.0617 2 DC A C4 36 N N4 . DC A 2 ? 0.1559 0.4689 0.2302 -0.0293 -0.0365 0.0618 2 DC A N4 37 C C5 . DC A 2 ? 0.2156 0.5274 0.2895 -0.0326 -0.0378 0.0609 2 DC A C5 38 C C6 . DC A 2 ? 0.2309 0.5427 0.3044 -0.0350 -0.0375 0.0609 2 DC A C6 39 P P . DA A 3 ? 0.3702 0.6808 0.4449 -0.0473 -0.0378 0.0576 3 DA A P 40 O OP1 . DA A 3 ? 0.3941 0.7038 0.4683 -0.0467 -0.0393 0.0576 3 DA A OP1 41 O OP2 . DA A 3 ? 0.3679 0.6787 0.4453 -0.0479 -0.0384 0.0558 3 DA A OP2 42 O "O5'" . DA A 3 ? 0.2901 0.6011 0.3634 -0.0495 -0.0364 0.0584 3 DA A "O5'" 43 C "C5'" . DA A 3 ? 0.2828 0.5939 0.3535 -0.0493 -0.0355 0.0602 3 DA A "C5'" 44 C "C4'" . DA A 3 ? 0.3336 0.6454 0.4031 -0.0506 -0.0338 0.0611 3 DA A "C4'" 45 O "O4'" . DA A 3 ? 0.3696 0.6823 0.4393 -0.0492 -0.0328 0.0616 3 DA A "O4'" 46 C "C3'" . DA A 3 ? 0.3901 0.7018 0.4608 -0.0530 -0.0338 0.0597 3 DA A "C3'" 47 O "O3'" . DA A 3 ? 0.4638 0.7757 0.5325 -0.0543 -0.0326 0.0608 3 DA A "O3'" 48 C "C2'" . DA A 3 ? 0.3680 0.6803 0.4403 -0.0526 -0.0334 0.0589 3 DA A "C2'" 49 C "C1'" . DA A 3 ? 0.3771 0.6900 0.4479 -0.0506 -0.0323 0.0606 3 DA A "C1'" 50 N N9 . DA A 3 ? 0.3336 0.6470 0.4058 -0.0492 -0.0323 0.0600 3 DA A N9 51 C C8 . DA A 3 ? 0.2882 0.6015 0.3614 -0.0473 -0.0331 0.0597 3 DA A C8 52 N N7 . DA A 3 ? 0.3301 0.6439 0.4046 -0.0464 -0.0328 0.0592 3 DA A N7 53 C C5 . DA A 3 ? 0.3081 0.6223 0.3824 -0.0478 -0.0317 0.0592 3 DA A C5 54 C C6 . DA A 3 ? 0.3060 0.6208 0.3812 -0.0478 -0.0310 0.0588 3 DA A C6 55 N N6 . DA A 3 ? 0.3008 0.6158 0.3773 -0.0462 -0.0312 0.0583 3 DA A N6 56 N N1 . DA A 3 ? 0.3225 0.6375 0.3972 -0.0494 -0.0301 0.0588 3 DA A N1 57 C C2 . DA A 3 ? 0.2281 0.5429 0.3014 -0.0510 -0.0300 0.0593 3 DA A C2 58 N N3 . DA A 3 ? 0.3447 0.6589 0.4170 -0.0512 -0.0305 0.0597 3 DA A N3 59 C C4 . DA A 3 ? 0.3263 0.6403 0.3993 -0.0496 -0.0314 0.0597 3 DA A C4 80 P P . DG A 5 ? 0.4760 1.0021 0.5451 0.0557 -0.0265 0.0317 5 DG A P 81 O OP1 . DG A 5 ? 0.5356 1.0608 0.6081 0.0580 -0.0278 0.0327 5 DG A OP1 82 O OP2 . DG A 5 ? 0.4333 0.9613 0.5037 0.0542 -0.0267 0.0320 5 DG A OP2 83 O "O5'" . DG A 5 ? 0.3984 0.9237 0.4639 0.0566 -0.0243 0.0303 5 DG A "O5'" 84 C "C5'" . DG A 5 ? 0.3868 0.9104 0.4508 0.0583 -0.0237 0.0299 5 DG A "C5'" 85 C "C4'" . DG A 5 ? 0.3886 0.9116 0.4528 0.0605 -0.0226 0.0296 5 DG A "C4'" 86 O "O4'" . DG A 5 ? 0.3685 0.8922 0.4302 0.0595 -0.0210 0.0286 5 DG A "O4'" 87 C "C3'" . DG A 5 ? 0.4360 0.9594 0.5048 0.0622 -0.0237 0.0308 5 DG A "C3'" 88 O "O3'" . DG A 5 ? 0.4515 0.9735 0.5204 0.0648 -0.0230 0.0307 5 DG A "O3'" 89 C "C2'" . DG A 5 ? 0.3977 0.9226 0.4669 0.0611 -0.0232 0.0307 5 DG A "C2'" 90 C "C1'" . DG A 5 ? 0.3422 0.8668 0.4068 0.0602 -0.0212 0.0292 5 DG A "C1'" 91 N N9 . DG A 5 ? 0.3375 0.8636 0.4010 0.0580 -0.0207 0.0288 5 DG A N9 92 C C8 . DG A 5 ? 0.2933 0.8208 0.3580 0.0559 -0.0218 0.0294 5 DG A C8 93 N N7 . DG A 5 ? 0.2289 0.7576 0.2921 0.0542 -0.0210 0.0288 5 DG A N7 94 C C5 . DG A 5 ? 0.2784 0.8064 0.3393 0.0552 -0.0194 0.0278 5 DG A C5 95 C C6 . DG A 5 ? 0.2841 0.8126 0.3426 0.0543 -0.0180 0.0269 5 DG A C6 96 O O6 . DG A 5 ? 0.3081 0.8380 0.3662 0.0523 -0.0179 0.0267 5 DG A O6 97 N N1 . DG A 5 ? 0.2394 0.7668 0.2961 0.0559 -0.0167 0.0262 5 DG A N1 98 C C2 . DG A 5 ? 0.2494 0.7753 0.3064 0.0582 -0.0167 0.0263 5 DG A C2 99 N N2 . DG A 5 ? 0.2419 0.7667 0.2967 0.0594 -0.0154 0.0255 5 DG A N2 100 N N3 . DG A 5 ? 0.3127 0.8380 0.3718 0.0591 -0.0179 0.0271 5 DG A N3 101 C C4 . DG A 5 ? 0.3094 0.8358 0.3704 0.0575 -0.0192 0.0279 5 DG A C4 102 P P . DC A 6 ? 0.4789 1.0009 0.5526 0.0670 -0.0241 0.0319 6 DC A P 103 O OP1 . DC A 6 ? 0.5602 1.0804 0.6337 0.0692 -0.0241 0.0318 6 DC A OP1 104 O OP2 . DC A 6 ? 0.5306 1.0538 0.6078 0.0660 -0.0260 0.0330 6 DC A OP2 105 O "O5'" . DC A 6 ? 0.4710 0.9935 0.5449 0.0678 -0.0229 0.0316 6 DC A "O5'" 106 C "C5'" . DC A 6 ? 0.4413 0.9630 0.5117 0.0684 -0.0210 0.0304 6 DC A "C5'" 107 C "C4'" . DC A 6 ? 0.3816 0.9042 0.4521 0.0682 -0.0201 0.0302 6 DC A "C4'" 108 O "O4'" . DC A 6 ? 0.3092 0.8331 0.3779 0.0656 -0.0198 0.0297 6 DC A "O4'" 109 C "C3'" . DC A 6 ? 0.3616 0.8851 0.4369 0.0693 -0.0210 0.0313 6 DC A "C3'" 110 O "O3'" . DC A 6 ? 0.3280 0.8507 0.4038 0.0715 -0.0201 0.0312 6 DC A "O3'" 111 C "C2'" . DC A 6 ? 0.3505 0.8757 0.4260 0.0673 -0.0209 0.0313 6 DC A "C2'" 112 C "C1'" . DC A 6 ? 0.2643 0.7893 0.3348 0.0655 -0.0197 0.0299 6 DC A "C1'" 113 N N1 . DC A 6 ? 0.2737 0.8002 0.3437 0.0629 -0.0199 0.0298 6 DC A N1 114 C C2 . DC A 6 ? 0.2792 0.8063 0.3466 0.0616 -0.0187 0.0289 6 DC A C2 115 O O2 . DC A 6 ? 0.2837 0.8100 0.3494 0.0627 -0.0174 0.0282 6 DC A O2 116 N N3 . DC A 6 ? 0.2351 0.7637 0.3021 0.0592 -0.0189 0.0288 6 DC A N3 117 C C4 . DC A 6 ? 0.2681 0.7975 0.3371 0.0581 -0.0203 0.0296 6 DC A C4 118 N N4 . DC A 6 ? 0.2549 0.7857 0.3233 0.0557 -0.0205 0.0294 6 DC A N4 119 C C5 . DC A 6 ? 0.2450 0.7738 0.3166 0.0593 -0.0217 0.0306 6 DC A C5 120 C C6 . DC A 6 ? 0.2341 0.7615 0.3062 0.0617 -0.0214 0.0307 6 DC A C6 121 P P . DA A 7 ? 0.3690 0.8910 0.4488 0.0741 -0.0210 0.0322 7 DA A P 122 O OP1 . DA A 7 ? 0.3503 0.8721 0.4315 0.0739 -0.0226 0.0329 7 DA A OP1 123 O OP2 . DA A 7 ? 0.3067 0.8298 0.3900 0.0747 -0.0212 0.0329 7 DA A OP2 124 O "O5'" . DA A 7 ? 0.3114 0.8316 0.3886 0.0760 -0.0197 0.0315 7 DA A "O5'" 125 C "C5'" . DA A 7 ? 0.2938 0.8130 0.3672 0.0755 -0.0191 0.0306 7 DA A "C5'" 126 C "C4'" . DA A 7 ? 0.2710 0.7890 0.3408 0.0764 -0.0174 0.0296 7 DA A "C4'" 127 O "O4'" . DA A 7 ? 0.2775 0.7965 0.3453 0.0748 -0.0165 0.0289 7 DA A "O4'" 128 C "C3'" . DA A 7 ? 0.3260 0.8434 0.3979 0.0790 -0.0170 0.0299 7 DA A "C3'" 129 O "O3'" . DA A 7 ? 0.2266 0.7423 0.2953 0.0801 -0.0160 0.0291 7 DA A "O3'" 130 C "C2'" . DA A 7 ? 0.3231 0.8414 0.3956 0.0785 -0.0164 0.0298 7 DA A "C2'" 131 C "C1'" . DA A 7 ? 0.3096 0.8284 0.3781 0.0761 -0.0156 0.0288 7 DA A "C1'" 132 N N9 . DA A 7 ? 0.1975 0.7179 0.2670 0.0748 -0.0155 0.0289 7 DA A N9 133 C C8 . DA A 7 ? 0.3090 0.8308 0.3799 0.0729 -0.0164 0.0293 7 DA A C8 134 N N7 . DA A 7 ? 0.2721 0.7951 0.3436 0.0720 -0.0161 0.0293 7 DA A N7 135 C C5 . DA A 7 ? 0.2768 0.7990 0.3472 0.0734 -0.0149 0.0288 7 DA A C5 136 C C6 . DA A 7 ? 0.3003 0.8229 0.3706 0.0733 -0.0141 0.0285 7 DA A C6 137 N N6 . DA A 7 ? 0.3731 0.8973 0.4446 0.0718 -0.0143 0.0286 7 DA A N6 138 N N1 . DA A 7 ? 0.3000 0.8215 0.3691 0.0749 -0.0131 0.0281 7 DA A N1 139 C C2 . DA A 7 ? 0.2984 0.8184 0.3662 0.0764 -0.0128 0.0280 7 DA A C2 140 N N3 . DA A 7 ? 0.2621 0.7816 0.3299 0.0767 -0.0135 0.0281 7 DA A N3 141 C C4 . DA A 7 ? 0.2174 0.7379 0.2865 0.0751 -0.0146 0.0286 7 DA A C4 142 P P . DT A 8 ? 0.2736 0.5879 0.4944 0.0774 -0.0213 0.0030 8 DT A P 143 O OP1 . DT A 8 ? 0.2289 0.5353 0.4418 0.0762 -0.0236 0.0096 8 DT A OP1 144 O OP2 . DT A 8 ? 0.2864 0.6055 0.5107 0.0807 -0.0250 0.0028 8 DT A OP2 145 O "O5'" . DT A 8 ? 0.2836 0.5872 0.5029 0.0763 -0.0167 0.0004 8 DT A "O5'" 146 C "C5'" . DT A 8 ? 0.2391 0.5476 0.4652 0.0773 -0.0139 -0.0056 8 DT A "C5'" 147 C "C4'" . DT A 8 ? 0.2966 0.5972 0.5213 0.0738 -0.0077 -0.0096 8 DT A "C4'" 148 O "O4'" . DT A 8 ? 0.3222 0.6080 0.5394 0.0734 -0.0075 -0.0053 8 DT A "O4'" 149 C "C3'" . DT A 8 ? 0.2034 0.5052 0.4274 0.0693 -0.0041 -0.0120 8 DT A "C3'" 150 O "O3'" . DT A 8 ? 0.2070 0.5095 0.4349 0.0671 0.0016 -0.0186 8 DT A "O3'" 151 C "C2'" . DT A 8 ? 0.2247 0.5131 0.4394 0.0671 -0.0042 -0.0065 8 DT A "C2'" 152 C "C1'" . DT A 8 ? 0.2623 0.5403 0.4740 0.0692 -0.0045 -0.0045 8 DT A "C1'" 153 N N1 . DT A 8 ? 0.2550 0.5216 0.4582 0.0695 -0.0075 0.0027 8 DT A N1 154 C C2 . DT A 8 ? 0.2385 0.4913 0.4358 0.0678 -0.0049 0.0041 8 DT A C2 155 O O2 . DT A 8 ? 0.2317 0.4809 0.4302 0.0659 -0.0001 -0.0004 8 DT A O2 156 N N3 . DT A 8 ? 0.2330 0.4762 0.4229 0.0682 -0.0082 0.0110 8 DT A N3 157 C C4 . DT A 8 ? 0.2842 0.5303 0.4720 0.0702 -0.0137 0.0166 8 DT A C4 158 O O4 . DT A 8 ? 0.3256 0.5623 0.5066 0.0704 -0.0163 0.0227 8 DT A O4 159 C C5 . DT A 8 ? 0.2591 0.5198 0.4533 0.0719 -0.0161 0.0148 8 DT A C5 160 C C7 . DT A 8 ? 0.2874 0.5525 0.4801 0.0741 -0.0220 0.0205 8 DT A C7 161 C C6 . DT A 8 ? 0.2434 0.5136 0.4449 0.0715 -0.0130 0.0081 8 DT A C6 162 P P . DG A 9 ? 0.2121 0.5243 0.4449 0.0640 0.0049 -0.0241 9 DG A P 163 O OP1 . DG A 9 ? 0.2405 0.5553 0.4791 0.0634 0.0096 -0.0310 9 DG A OP1 164 O OP2 . DG A 9 ? 0.2204 0.5444 0.4563 0.0657 0.0006 -0.0228 9 DG A OP2 165 O "O5'" . DG A 9 ? 0.1958 0.4984 0.4216 0.0595 0.0076 -0.0221 9 DG A "O5'" 166 C "C5'" . DG A 9 ? 0.2088 0.5006 0.4314 0.0567 0.0125 -0.0240 9 DG A "C5'" 167 C "C4'" . DG A 9 ? 0.1451 0.4278 0.3603 0.0530 0.0135 -0.0205 9 DG A "C4'" 168 O "O4'" . DG A 9 ? 0.1668 0.4403 0.3751 0.0547 0.0096 -0.0134 9 DG A "O4'" 169 C "C3'" . DG A 9 ? 0.1630 0.4537 0.3791 0.0512 0.0126 -0.0203 9 DG A "C3'" 170 O "O3'" . DG A 9 ? 0.2299 0.5250 0.4499 0.0479 0.0175 -0.0264 9 DG A "O3'" 171 C "C2'" . DG A 9 ? 0.1511 0.4309 0.3584 0.0494 0.0112 -0.0140 9 DG A "C2'" 172 C "C1'" . DG A 9 ? 0.1566 0.4268 0.3596 0.0523 0.0085 -0.0094 9 DG A "C1'" 173 N N9 . DG A 9 ? 0.1821 0.4540 0.3828 0.0554 0.0025 -0.0033 9 DG A N9 174 C C8 . DG A 9 ? 0.1748 0.4585 0.3792 0.0572 -0.0012 -0.0026 9 DG A C8 175 N N7 . DG A 9 ? 0.1720 0.4542 0.3730 0.0599 -0.0064 0.0035 9 DG A N7 176 C C5 . DG A 9 ? 0.2061 0.4744 0.4008 0.0598 -0.0061 0.0071 9 DG A C5 177 C C6 . DG A 9 ? 0.2117 0.4721 0.4006 0.0621 -0.0105 0.0139 9 DG A C6 178 O O6 . DG A 9 ? 0.2194 0.4838 0.4076 0.0646 -0.0155 0.0184 9 DG A O6 179 N N1 . DG A 9 ? 0.2106 0.4573 0.3942 0.0611 -0.0084 0.0154 9 DG A N1 180 C C2 . DG A 9 ? 0.2366 0.4778 0.4203 0.0583 -0.0028 0.0109 9 DG A C2 181 N N2 . DG A 9 ? 0.2536 0.4812 0.4314 0.0577 -0.0017 0.0133 9 DG A N2 182 N N3 . DG A 9 ? 0.2129 0.4614 0.4020 0.0561 0.0013 0.0045 9 DG A N3 183 C C4 . DG A 9 ? 0.1633 0.4252 0.3577 0.0571 -0.0007 0.0029 9 DG A C4 184 P P . DC A 10 ? 0.2102 0.5199 0.4363 0.0473 0.0171 -0.0298 10 DC A P 185 O OP1 . DC A 10 ? 0.1498 0.4591 0.3713 0.0465 0.0139 -0.0247 10 DC A OP1 186 O OP2 . DC A 10 ? 0.1733 0.4854 0.4034 0.0440 0.0228 -0.0366 10 DC A OP2 187 O "O5'" . DC A 10 ? 0.2614 0.5823 0.4941 0.0519 0.0135 -0.0309 10 DC A "O5'" 188 C "C5'" . DC A 10 ? 0.3086 0.6319 0.5467 0.0535 0.0155 -0.0356 10 DC A "C5'" 189 C "C4'" . DC A 10 ? 0.3221 0.6511 0.5639 0.0523 0.0164 -0.0401 10 DC A "C4'" 190 O "O4'" . DC A 10 ? 0.2959 0.6290 0.5363 0.0533 0.0116 -0.0370 10 DC A "O4'" 191 C "C3'" . DC A 10 ? 0.3376 0.6692 0.5845 0.0546 0.0171 -0.0437 10 DC A "C3'" 192 O "O3'" . DC A 10 ? 0.3769 0.7052 0.6256 0.0523 0.0227 -0.0487 10 DC A "O3'" 193 C "C2'" . DC A 10 ? 0.3037 0.6411 0.5522 0.0545 0.0150 -0.0451 10 DC A "C2'" 194 C "C1'" . DC A 10 ? 0.2635 0.6016 0.5076 0.0540 0.0111 -0.0403 10 DC A "C1'" 195 N N1 . DC A 10 ? 0.2800 0.6215 0.5241 0.0576 0.0054 -0.0365 10 DC A N1 196 C C2 . DC A 10 ? 0.2798 0.6257 0.5237 0.0572 0.0028 -0.0363 10 DC A C2 197 O O2 . DC A 10 ? 0.2304 0.5777 0.4743 0.0541 0.0053 -0.0394 10 DC A O2 198 N N3 . DC A 10 ? 0.2877 0.6361 0.5313 0.0603 -0.0023 -0.0328 10 DC A N3 199 C C4 . DC A 10 ? 0.3079 0.6542 0.5511 0.0636 -0.0050 -0.0293 10 DC A C4 200 N N4 . DC A 10 ? 0.3358 0.6838 0.5782 0.0664 -0.0100 -0.0259 10 DC A N4 201 C C5 . DC A 10 ? 0.2897 0.6316 0.5330 0.0643 -0.0026 -0.0293 10 DC A C5 202 C C6 . DC A 10 ? 0.2719 0.6117 0.5158 0.0612 0.0026 -0.0330 10 DC A C6 #
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