Acta Crystallographica Section D
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STRUCTURAL BIOLOGY
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STRUCTURAL
BIOLOGY
Volume 59
|
Part 1
|
January 2003
|
Pages 67–72
https://doi.org/10.1107/S0907444902018917
Open
access
ISSN: 2059-7983
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STRUCTURAL
BIOLOGY
Volume 59
|
Part 1
|
January 2003
|
Pages 67–72
https://doi.org/10.1107/S0907444902018917
Open
access
ISSN: 2059-7983
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data_1M77 # _entry.id 1M77 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1M77 pdb_00001m77 10.2210/pdb1m77/pdb NDB AD0026 ? ? RCSB RCSB016681 ? ? WWPDB D_1000016681 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-01-07 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' struct_site 6 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1M77 _pdbx_database_status.recvd_initial_deposition_date 2002-07-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ramakrishnan, B.' 1 'Sekharudu, C.' 2 'Pan, B.C.' 3 'Sundaralingam, M.' 4 # _citation.id primary _citation.title 'Near-atomic resolution crystal structure of an A-DNA decamer d(CCCGATCGGG): cobalt hexammine interaction with A-DNA.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 59 _citation.page_first 67 _citation.page_last 72 _citation.year 2003 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12499541 _citation.pdbx_database_id_DOI 10.1107/S0907444902018917 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramakrishnan, B.' 1 ? primary 'Sekharudu, C.' 2 ? primary 'Pan, B.' 3 ? primary 'Sundaralingam, M.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*CP*GP*AP*TP*CP*GP*GP*G)-3'" 3045.992 1 ? ? ? ? 2 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 1 ? ? ? ? 3 water nat water 18.015 34 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DC)(DG)(DA)(DT)(DC)(DG)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCCGATCGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT HEXAMMINE(III)' NCO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DT n 1 7 DC n 1 8 DG n 1 9 DG n 1 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT A . n A 1 2 DC 2 2 2 DC CYT A . n A 1 3 DC 3 3 3 DC CYT A . n A 1 4 DG 4 4 4 DG GUA A . n A 1 5 DA 5 5 5 DA ADE A . n A 1 6 DT 6 6 6 DT THY A . n A 1 7 DC 7 7 7 DC CYT A . n A 1 8 DG 8 8 8 DG GUA A . n A 1 9 DG 9 9 9 DG GUA A . n A 1 10 DG 10 10 10 DG GUA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NCO 1 201 201 NCO COH A . C 3 HOH 1 101 101 HOH HOH A . C 3 HOH 2 102 102 HOH HOH A . C 3 HOH 3 103 103 HOH HOH A . C 3 HOH 4 104 104 HOH HOH A . C 3 HOH 5 105 105 HOH HOH A . C 3 HOH 6 106 106 HOH HOH A . C 3 HOH 7 107 107 HOH HOH A . C 3 HOH 8 108 108 HOH HOH A . C 3 HOH 9 109 109 HOH HOH A . C 3 HOH 10 110 110 HOH HOH A . C 3 HOH 11 111 111 HOH HOH A . C 3 HOH 12 112 112 HOH HOH A . C 3 HOH 13 113 113 HOH HOH A . C 3 HOH 14 114 114 HOH HOH A . C 3 HOH 15 115 115 HOH HOH A . C 3 HOH 16 116 116 HOH HOH A . C 3 HOH 17 117 117 HOH HOH A . C 3 HOH 18 118 118 HOH HOH A . C 3 HOH 19 119 119 HOH HOH A . C 3 HOH 20 120 120 HOH HOH A . C 3 HOH 21 121 121 HOH HOH A . C 3 HOH 22 122 122 HOH HOH A . C 3 HOH 23 123 123 HOH HOH A . C 3 HOH 24 124 124 HOH HOH A . C 3 HOH 25 125 125 HOH HOH A . C 3 HOH 26 126 126 HOH HOH A . C 3 HOH 27 127 127 HOH HOH A . C 3 HOH 28 128 128 HOH HOH A . C 3 HOH 29 129 129 HOH HOH A . C 3 HOH 30 130 130 HOH HOH A . C 3 HOH 31 131 131 HOH HOH A . C 3 HOH 32 132 132 HOH HOH A . C 3 HOH 33 133 133 HOH HOH A . C 3 HOH 34 134 134 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-GEN 'data scaling' 2.0 ? 1 X-GEN 'data reduction' 2.0 ? 2 X-PLOR refinement . ? 3 # _cell.entry_id 1M77 _cell.length_a 44.3 _cell.length_b 44.3 _cell.length_c 24.8 _cell.angle_alpha 90.0 _cell.angle_beta 90.0 _cell.angle_gamma 90.0 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.entry_id 1M77 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 96 _symmetry.cell_setting ? # _exptl.entry_id 1M77 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 35.50 _exptl_crystal.density_Matthews 1.91 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'cobalt hexammine, cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'cobalt hexammine' ? ? ? 1 2 1 cacodylate ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type NICOLET _diffrn_detector.pdbx_collection_date 1993-09-22 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type SIEMENS _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1M77 _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.d_resolution_high 1.25 _reflns.d_resolution_low 28.0 _reflns.number_all 7785 _reflns.number_obs 6929 _reflns.percent_possible_obs 90 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.055 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.4 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.25 _reflns_shell.d_res_low 1.31 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 433 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1M77 _refine.ls_d_res_high 1.25 _refine.ls_d_res_low 8.0 _refine.pdbx_ls_sigma_F 2 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 5969 _refine.ls_number_reflns_obs 5316 _refine.ls_number_reflns_R_free 653 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.163 _refine.ls_R_factor_R_free 0.185 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'fiber A-DNA' _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 243 _refine_hist.d_res_high 1.25 _refine_hist.d_res_low 8.0 # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.25 _refine_ls_shell.d_res_low 1.31 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.197 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.224 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1M77 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1M77 _struct.title 'Near Atomic Resolution Crystal Structure of an A-DNA Decamer d(CCCGATCGGG): Cobalt Hexammine Interactions with A-DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1M77 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, Cobalt hexammine, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1M77 _struct_ref.pdbx_db_accession 1M77 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1M77 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1M77 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 10 N1 ? ? A DC 1 A DG 10 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 10 O6 ? ? A DC 1 A DG 10 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 10 N2 ? ? A DC 1 A DG 10 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 9 N1 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 9 O6 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 9 N2 ? ? A DC 2 A DG 9 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 8 N1 ? ? A DC 3 A DG 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 8 O6 ? ? A DC 3 A DG 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 8 N2 ? ? A DC 3 A DG 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DC 7 N3 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DC 7 O2 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DC 7 N4 ? ? A DG 4 A DC 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 6 N3 ? ? A DA 5 A DT 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 6 O4 ? ? A DA 5 A DT 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 6 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 6 A DA 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 6 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 6 A DA 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 4 N1 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 4 O6 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 4 N2 ? ? A DC 7 A DG 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DC 3 N3 ? ? A DG 8 A DC 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DC 3 O2 ? ? A DG 8 A DC 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DC 3 N4 ? ? A DG 8 A DC 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DC 2 N3 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DC 2 O2 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DC 2 N4 ? ? A DG 9 A DC 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 1 N3 ? ? A DG 10 A DC 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 1 O2 ? ? A DG 10 A DC 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 1 N4 ? ? A DG 10 A DC 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NCO _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE NCO A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 DC A 3 ? DC A 3 . ? 5_545 ? 2 AC1 12 DG A 4 ? DG A 4 . ? 5_545 ? 3 AC1 12 DA A 5 ? DA A 5 . ? 7_556 ? 4 AC1 12 DG A 9 ? DG A 9 . ? 4_555 ? 5 AC1 12 DG A 9 ? DG A 9 . ? 1_555 ? 6 AC1 12 DG A 10 ? DG A 10 . ? 4_555 ? 7 AC1 12 HOH C . ? HOH A 101 . ? 1_555 ? 8 AC1 12 HOH C . ? HOH A 102 . ? 1_555 ? 9 AC1 12 HOH C . ? HOH A 103 . ? 1_555 ? 10 AC1 12 HOH C . ? HOH A 104 . ? 7_556 ? 11 AC1 12 HOH C . ? HOH A 111 . ? 5_545 ? 12 AC1 12 HOH C . ? HOH A 123 . ? 7_556 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.05 108.30 2.75 0.30 N 2 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.56 108.30 2.26 0.30 N 3 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 112.89 108.30 4.59 0.30 N 4 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.39 108.30 2.09 0.30 N 5 1 "O3'" A DA 5 ? ? P A DT 6 ? ? OP2 A DT 6 ? ? 117.63 110.50 7.13 1.10 Y 6 1 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.14 122.90 -3.76 0.60 N 7 1 "O3'" A DT 6 ? ? P A DC 7 ? ? OP2 A DC 7 ? ? 120.04 110.50 9.54 1.10 Y 8 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 112.51 108.30 4.21 0.30 N 9 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.43 108.30 4.13 0.30 N 10 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.30 108.30 2.00 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 1 ? ? 0.076 'SIDE CHAIN' 2 1 DC A 2 ? ? 0.112 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 NCO CO CO N N 147 NCO N1 N N N 148 NCO N2 N N N 149 NCO N3 N N N 150 NCO N4 N N N 151 NCO N5 N N N 152 NCO N6 N N N 153 NCO HN11 H N N 154 NCO HN12 H N N 155 NCO HN13 H N N 156 NCO HN21 H N N 157 NCO HN22 H N N 158 NCO HN23 H N N 159 NCO HN31 H N N 160 NCO HN32 H N N 161 NCO HN33 H N N 162 NCO HN41 H N N 163 NCO HN42 H N N 164 NCO HN43 H N N 165 NCO HN51 H N N 166 NCO HN52 H N N 167 NCO HN53 H N N 168 NCO HN61 H N N 169 NCO HN62 H N N 170 NCO HN63 H N N 171 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 NCO CO N1 sing N N 152 NCO CO N2 sing N N 153 NCO CO N3 sing N N 154 NCO CO N4 sing N N 155 NCO CO N5 sing N N 156 NCO CO N6 sing N N 157 NCO N1 HN11 sing N N 158 NCO N1 HN12 sing N N 159 NCO N1 HN13 sing N N 160 NCO N2 HN21 sing N N 161 NCO N2 HN22 sing N N 162 NCO N2 HN23 sing N N 163 NCO N3 HN31 sing N N 164 NCO N3 HN32 sing N N 165 NCO N3 HN33 sing N N 166 NCO N4 HN41 sing N N 167 NCO N4 HN42 sing N N 168 NCO N4 HN43 sing N N 169 NCO N5 HN51 sing N N 170 NCO N5 HN52 sing N N 171 NCO N5 HN53 sing N N 172 NCO N6 HN61 sing N N 173 NCO N6 HN62 sing N N 174 NCO N6 HN63 sing N N 175 # _ndb_struct_conf_na.entry_id 1M77 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 10 7_555 0.086 -0.093 0.092 1.441 -9.247 0.027 1 A_DC1:DG10_A A 1 ? A 10 ? 19 1 1 A DC 2 1_555 A DG 9 7_555 0.182 -0.230 -0.032 7.020 -17.995 -2.022 2 A_DC2:DG9_A A 2 ? A 9 ? 19 1 1 A DC 3 1_555 A DG 8 7_555 0.258 -0.173 0.135 -0.469 -17.396 1.890 3 A_DC3:DG8_A A 3 ? A 8 ? 19 1 1 A DG 4 1_555 A DC 7 7_555 -0.174 -0.119 -0.354 -17.409 -11.261 -0.368 4 A_DG4:DC7_A A 4 ? A 7 ? 19 1 1 A DA 5 1_555 A DT 6 7_555 0.099 -0.151 0.063 -7.473 -8.842 0.517 5 A_DA5:DT6_A A 5 ? A 6 ? 20 1 1 A DT 6 1_555 A DA 5 7_555 -0.099 -0.151 0.063 7.473 -8.842 0.517 6 A_DT6:DA5_A A 6 ? A 5 ? 20 1 1 A DC 7 1_555 A DG 4 7_555 0.174 -0.119 -0.354 17.409 -11.261 -0.368 7 A_DC7:DG4_A A 7 ? A 4 ? 19 1 1 A DG 8 1_555 A DC 3 7_555 -0.258 -0.173 0.135 0.469 -17.396 1.890 8 A_DG8:DC3_A A 8 ? A 3 ? 19 1 1 A DG 9 1_555 A DC 2 7_555 -0.182 -0.230 -0.032 -7.019 -17.995 -2.022 9 A_DG9:DC2_A A 9 ? A 2 ? 19 1 1 A DG 10 1_555 A DC 1 7_555 -0.086 -0.093 0.092 -1.441 -9.247 0.027 10 A_DG10:DC1_A A 10 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 10 7_555 A DC 2 1_555 A DG 9 7_555 -0.349 -1.153 3.166 -1.912 3.058 37.457 -2.167 0.303 3.079 4.749 2.969 37.624 1 AA_DC1DC2:DG9DG10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DC 2 1_555 A DG 9 7_555 A DC 3 1_555 A DG 8 7_555 0.486 -1.494 3.543 -1.981 4.722 31.700 -3.589 -1.251 3.257 8.574 3.596 32.100 2 AA_DC2DC3:DG8DG9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DC 3 1_555 A DG 8 7_555 A DG 4 1_555 A DC 7 7_555 -0.889 -1.626 3.639 1.032 18.312 33.039 -4.875 1.510 2.413 29.539 -1.664 37.664 3 AA_DC3DG4:DC7DG8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A DG 4 1_555 A DC 7 7_555 A DA 5 1_555 A DT 6 7_555 0.972 -1.665 3.121 -0.480 14.115 24.067 -6.225 -2.114 1.856 30.701 1.045 27.852 4 AA_DG4DA5:DT6DC7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DA 5 1_555 A DT 6 7_555 A DT 6 1_555 A DA 5 7_555 0.000 -1.486 3.175 0.000 4.119 30.101 -3.613 0.000 2.950 7.885 0.000 30.375 5 AA_DA5DT6:DA5DT6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DT 6 1_555 A DA 5 7_555 A DC 7 1_555 A DG 4 7_555 -0.972 -1.665 3.121 0.480 14.115 24.067 -6.225 2.114 1.856 30.701 -1.045 27.852 6 AA_DT6DC7:DG4DA5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DC 7 1_555 A DG 4 7_555 A DG 8 1_555 A DC 3 7_555 0.889 -1.626 3.639 -1.032 18.312 33.039 -4.875 -1.510 2.413 29.539 1.664 37.664 7 AA_DC7DG8:DC3DG4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DG 8 1_555 A DC 3 7_555 A DG 9 1_555 A DC 2 7_555 -0.486 -1.494 3.543 1.981 4.722 31.700 -3.589 1.251 3.257 8.574 -3.596 32.100 8 AA_DG8DG9:DC2DC3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DG 9 1_555 A DC 2 7_555 A DG 10 1_555 A DC 1 7_555 0.349 -1.153 3.166 1.912 3.058 37.457 -2.167 -0.303 3.079 4.749 -2.969 37.624 9 AA_DG9DG10:DC1DC2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'fiber A-DNA' # _atom_sites.entry_id 1M77 _atom_sites.fract_transf_matrix[1][1] 0.022573 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022573 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040323 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 14.665 16.053 -7.568 1.00 18.19 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 15.603 17.135 -7.515 1.00 15.43 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 14.916 18.466 -7.295 1.00 14.30 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 13.958 18.711 -8.344 1.00 13.64 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 14.126 18.515 -5.999 1.00 13.72 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 14.892 18.794 -4.827 1.00 13.63 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 13.093 19.582 -6.315 1.00 12.65 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 12.804 19.410 -7.816 1.00 12.58 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 11.547 18.615 -8.030 1.00 11.10 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 10.322 19.226 -7.803 1.00 9.78 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 10.258 20.286 -7.188 1.00 9.98 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 9.179 18.537 -8.115 1.00 9.62 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 9.219 17.379 -8.789 1.00 9.88 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 8.081 16.779 -9.128 1.00 9.40 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 10.479 16.720 -9.010 1.00 10.89 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 11.593 17.346 -8.565 1.00 10.95 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? 14.499 18.110 -3.425 1.00 13.79 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? 15.656 18.319 -2.533 1.00 14.56 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? 13.941 16.751 -3.611 1.00 14.09 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? 13.292 19.014 -2.840 1.00 12.43 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? 13.496 20.347 -2.363 1.00 10.71 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? 12.159 21.098 -2.253 1.00 10.25 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? 11.421 21.064 -3.498 1.00 9.04 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? 11.226 20.473 -1.236 1.00 9.45 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? 11.511 20.805 0.125 1.00 10.03 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? 9.875 20.932 -1.733 1.00 8.46 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? 10.006 20.935 -3.240 1.00 8.24 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? 9.481 19.659 -3.817 1.00 7.58 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? 8.110 19.520 -3.980 1.00 7.18 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? 7.329 20.340 -3.504 1.00 7.01 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? 7.646 18.398 -4.618 1.00 6.72 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? 8.469 17.449 -5.062 1.00 6.69 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? 7.966 16.454 -5.802 1.00 7.97 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? 9.850 17.483 -4.713 1.00 7.20 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? 10.301 18.593 -4.088 1.00 7.60 ? 2 DC A C6 1 ATOM 36 P P . DC A 1 3 ? 11.253 19.684 1.222 1.00 10.81 ? 3 DC A P 1 ATOM 37 O OP1 . DC A 1 3 ? 11.795 20.401 2.388 1.00 12.37 ? 3 DC A OP1 1 ATOM 38 O OP2 . DC A 1 3 ? 11.787 18.376 0.832 1.00 12.77 ? 3 DC A OP2 1 ATOM 39 O "O5'" . DC A 1 3 ? 9.678 19.547 1.413 1.00 9.56 ? 3 DC A "O5'" 1 ATOM 40 C "C5'" . DC A 1 3 ? 8.909 20.648 1.890 1.00 8.52 ? 3 DC A "C5'" 1 ATOM 41 C "C4'" . DC A 1 3 ? 7.438 20.480 1.575 1.00 7.30 ? 3 DC A "C4'" 1 ATOM 42 O "O4'" . DC A 1 3 ? 7.229 20.290 0.173 1.00 7.08 ? 3 DC A "O4'" 1 ATOM 43 C "C3'" . DC A 1 3 ? 6.822 19.265 2.260 1.00 7.20 ? 3 DC A "C3'" 1 ATOM 44 O "O3'" . DC A 1 3 ? 6.527 19.475 3.649 1.00 7.07 ? 3 DC A "O3'" 1 ATOM 45 C "C2'" . DC A 1 3 ? 5.638 18.992 1.355 1.00 6.82 ? 3 DC A "C2'" 1 ATOM 46 C "C1'" . DC A 1 3 ? 6.145 19.376 -0.033 1.00 6.58 ? 3 DC A "C1'" 1 ATOM 47 N N1 . DC A 1 3 ? 6.549 18.157 -0.807 1.00 6.74 ? 3 DC A N1 1 ATOM 48 C C2 . DC A 1 3 ? 5.536 17.384 -1.338 1.00 6.72 ? 3 DC A C2 1 ATOM 49 O O2 . DC A 1 3 ? 4.359 17.685 -1.169 1.00 7.05 ? 3 DC A O2 1 ATOM 50 N N3 . DC A 1 3 ? 5.855 16.234 -2.000 1.00 7.57 ? 3 DC A N3 1 ATOM 51 C C4 . DC A 1 3 ? 7.132 15.860 -2.169 1.00 7.34 ? 3 DC A C4 1 ATOM 52 N N4 . DC A 1 3 ? 7.369 14.712 -2.817 1.00 8.32 ? 3 DC A N4 1 ATOM 53 C C5 . DC A 1 3 ? 8.194 16.591 -1.532 1.00 7.57 ? 3 DC A C5 1 ATOM 54 C C6 . DC A 1 3 ? 7.866 17.768 -0.953 1.00 6.99 ? 3 DC A C6 1 ATOM 55 P P . DG A 1 4 ? 6.104 18.201 4.533 1.00 7.29 ? 4 DG A P 1 ATOM 56 O OP1 . DG A 1 4 ? 5.990 18.840 5.879 1.00 7.52 ? 4 DG A OP1 1 ATOM 57 O OP2 . DG A 1 4 ? 7.021 17.058 4.334 1.00 7.79 ? 4 DG A OP2 1 ATOM 58 O "O5'" . DG A 1 4 ? 4.663 17.713 4.062 1.00 6.42 ? 4 DG A "O5'" 1 ATOM 59 C "C5'" . DG A 1 4 ? 3.438 18.385 4.377 1.00 7.03 ? 4 DG A "C5'" 1 ATOM 60 C "C4'" . DG A 1 4 ? 2.252 17.451 4.114 1.00 7.47 ? 4 DG A "C4'" 1 ATOM 61 O "O4'" . DG A 1 4 ? 2.151 17.161 2.712 1.00 7.14 ? 4 DG A "O4'" 1 ATOM 62 C "C3'" . DG A 1 4 ? 2.389 16.089 4.794 1.00 7.89 ? 4 DG A "C3'" 1 ATOM 63 O "O3'" . DG A 1 4 ? 1.925 16.119 6.164 1.00 7.70 ? 4 DG A "O3'" 1 ATOM 64 C "C2'" . DG A 1 4 ? 1.554 15.209 3.869 1.00 7.12 ? 4 DG A "C2'" 1 ATOM 65 C "C1'" . DG A 1 4 ? 1.793 15.795 2.494 1.00 7.68 ? 4 DG A "C1'" 1 ATOM 66 N N9 . DG A 1 4 ? 2.911 15.099 1.816 1.00 6.32 ? 4 DG A N9 1 ATOM 67 C C8 . DG A 1 4 ? 4.235 15.442 1.733 1.00 7.12 ? 4 DG A C8 1 ATOM 68 N N7 . DG A 1 4 ? 4.939 14.686 0.930 1.00 7.07 ? 4 DG A N7 1 ATOM 69 C C5 . DG A 1 4 ? 4.010 13.769 0.455 1.00 7.26 ? 4 DG A C5 1 ATOM 70 C C6 . DG A 1 4 ? 4.201 12.620 -0.366 1.00 7.47 ? 4 DG A C6 1 ATOM 71 O O6 . DG A 1 4 ? 5.213 12.281 -0.975 1.00 8.30 ? 4 DG A O6 1 ATOM 72 N N1 . DG A 1 4 ? 3.067 11.849 -0.475 1.00 7.26 ? 4 DG A N1 1 ATOM 73 C C2 . DG A 1 4 ? 1.846 12.170 0.062 1.00 7.77 ? 4 DG A C2 1 ATOM 74 N N2 . DG A 1 4 ? 0.884 11.253 -0.063 1.00 8.90 ? 4 DG A N2 1 ATOM 75 N N3 . DG A 1 4 ? 1.652 13.234 0.859 1.00 7.63 ? 4 DG A N3 1 ATOM 76 C C4 . DG A 1 4 ? 2.787 13.961 1.050 1.00 7.12 ? 4 DG A C4 1 ATOM 77 P P . DA A 1 5 ? 2.584 15.138 7.248 1.00 8.21 ? 5 DA A P 1 ATOM 78 O OP1 . DA A 1 5 ? 1.831 15.466 8.473 1.00 9.48 ? 5 DA A OP1 1 ATOM 79 O OP2 . DA A 1 5 ? 4.047 15.291 7.215 1.00 9.11 ? 5 DA A OP2 1 ATOM 80 O "O5'" . DA A 1 5 ? 2.160 13.686 6.740 1.00 9.82 ? 5 DA A "O5'" 1 ATOM 81 C "C5'" . DA A 1 5 ? 3.020 12.548 6.820 1.00 9.08 ? 5 DA A "C5'" 1 ATOM 82 C "C4'" . DA A 1 5 ? 2.410 11.431 6.019 1.00 9.86 ? 5 DA A "C4'" 1 ATOM 83 O "O4'" . DA A 1 5 ? 2.429 11.743 4.608 1.00 9.75 ? 5 DA A "O4'" 1 ATOM 84 C "C3'" . DA A 1 5 ? 3.163 10.134 6.181 1.00 10.74 ? 5 DA A "C3'" 1 ATOM 85 O "O3'" . DA A 1 5 ? 2.722 9.424 7.344 1.00 11.15 ? 5 DA A "O3'" 1 ATOM 86 C "C2'" . DA A 1 5 ? 2.813 9.432 4.878 1.00 9.94 ? 5 DA A "C2'" 1 ATOM 87 C "C1'" . DA A 1 5 ? 2.653 10.542 3.845 1.00 9.62 ? 5 DA A "C1'" 1 ATOM 88 N N9 . DA A 1 5 ? 3.871 10.678 3.015 1.00 8.83 ? 5 DA A N9 1 ATOM 89 C C8 . DA A 1 5 ? 4.913 11.558 3.175 1.00 8.97 ? 5 DA A C8 1 ATOM 90 N N7 . DA A 1 5 ? 5.862 11.387 2.298 1.00 8.89 ? 5 DA A N7 1 ATOM 91 C C5 . DA A 1 5 ? 5.502 10.231 1.615 1.00 8.25 ? 5 DA A C5 1 ATOM 92 C C6 . DA A 1 5 ? 6.107 9.534 0.541 1.00 8.03 ? 5 DA A C6 1 ATOM 93 N N6 . DA A 1 5 ? 7.272 9.886 -0.003 1.00 7.80 ? 5 DA A N6 1 ATOM 94 N N1 . DA A 1 5 ? 5.453 8.476 0.053 1.00 8.44 ? 5 DA A N1 1 ATOM 95 C C2 . DA A 1 5 ? 4.274 8.166 0.561 1.00 9.09 ? 5 DA A C2 1 ATOM 96 N N3 . DA A 1 5 ? 3.617 8.730 1.579 1.00 9.39 ? 5 DA A N3 1 ATOM 97 C C4 . DA A 1 5 ? 4.279 9.809 2.024 1.00 8.46 ? 5 DA A C4 1 ATOM 98 P P . DT A 1 6 ? 3.806 8.470 8.052 1.00 12.59 ? 6 DT A P 1 ATOM 99 O OP1 . DT A 1 6 ? 2.967 8.225 9.251 1.00 14.70 ? 6 DT A OP1 1 ATOM 100 O OP2 . DT A 1 6 ? 5.180 8.969 8.165 1.00 12.29 ? 6 DT A OP2 1 ATOM 101 O "O5'" . DT A 1 6 ? 3.855 7.142 7.187 1.00 12.85 ? 6 DT A "O5'" 1 ATOM 102 C "C5'" . DT A 1 6 ? 2.729 6.264 7.147 1.00 12.87 ? 6 DT A "C5'" 1 ATOM 103 C "C4'" . DT A 1 6 ? 2.947 5.202 6.091 1.00 12.91 ? 6 DT A "C4'" 1 ATOM 104 O "O4'" . DT A 1 6 ? 3.190 5.846 4.838 1.00 11.85 ? 6 DT A "O4'" 1 ATOM 105 C "C3'" . DT A 1 6 ? 4.201 4.377 6.356 1.00 13.02 ? 6 DT A "C3'" 1 ATOM 106 O "O3'" . DT A 1 6 ? 3.998 3.318 7.285 1.00 14.50 ? 6 DT A "O3'" 1 ATOM 107 C "C2'" . DT A 1 6 ? 4.566 3.922 4.973 1.00 12.29 ? 6 DT A "C2'" 1 ATOM 108 C "C1'" . DT A 1 6 ? 4.114 5.060 4.084 1.00 11.80 ? 6 DT A "C1'" 1 ATOM 109 N N1 . DT A 1 6 ? 5.258 5.888 3.666 1.00 11.20 ? 6 DT A N1 1 ATOM 110 C C2 . DT A 1 6 ? 5.943 5.482 2.525 1.00 11.29 ? 6 DT A C2 1 ATOM 111 O O2 . DT A 1 6 ? 5.642 4.492 1.856 1.00 11.86 ? 6 DT A O2 1 ATOM 112 N N3 . DT A 1 6 ? 7.060 6.223 2.205 1.00 10.67 ? 6 DT A N3 1 ATOM 113 C C4 . DT A 1 6 ? 7.507 7.335 2.872 1.00 10.02 ? 6 DT A C4 1 ATOM 114 O O4 . DT A 1 6 ? 8.472 7.929 2.420 1.00 10.24 ? 6 DT A O4 1 ATOM 115 C C5 . DT A 1 6 ? 6.781 7.649 4.092 1.00 9.96 ? 6 DT A C5 1 ATOM 116 C C7 . DT A 1 6 ? 7.176 8.847 4.938 1.00 8.98 ? 6 DT A C7 1 ATOM 117 C C6 . DT A 1 6 ? 5.707 6.933 4.439 1.00 10.16 ? 6 DT A C6 1 ATOM 118 P P . DC A 1 7 ? 5.234 2.919 8.216 1.00 14.66 ? 7 DC A P 1 ATOM 119 O OP1 . DC A 1 7 ? 4.549 2.083 9.241 1.00 16.28 ? 7 DC A OP1 1 ATOM 120 O OP2 . DC A 1 7 ? 6.209 3.953 8.639 1.00 15.26 ? 7 DC A OP2 1 ATOM 121 O "O5'" . DC A 1 7 ? 6.056 1.929 7.229 1.00 14.07 ? 7 DC A "O5'" 1 ATOM 122 C "C5'" . DC A 1 7 ? 5.476 0.677 6.868 1.00 12.69 ? 7 DC A "C5'" 1 ATOM 123 C "C4'" . DC A 1 7 ? 6.299 -0.032 5.820 1.00 11.62 ? 7 DC A "C4'" 1 ATOM 124 O "O4'" . DC A 1 7 ? 6.266 0.720 4.600 1.00 11.62 ? 7 DC A "O4'" 1 ATOM 125 C "C3'" . DC A 1 7 ? 7.754 -0.144 6.201 1.00 11.52 ? 7 DC A "C3'" 1 ATOM 126 O "O3'" . DC A 1 7 ? 7.961 -1.256 7.057 1.00 11.58 ? 7 DC A "O3'" 1 ATOM 127 C "C2'" . DC A 1 7 ? 8.358 -0.316 4.840 1.00 10.73 ? 7 DC A "C2'" 1 ATOM 128 C "C1'" . DC A 1 7 ? 7.533 0.571 3.955 1.00 10.20 ? 7 DC A "C1'" 1 ATOM 129 N N1 . DC A 1 7 ? 8.215 1.861 3.746 1.00 9.24 ? 7 DC A N1 1 ATOM 130 C C2 . DC A 1 7 ? 9.040 1.961 2.636 1.00 9.40 ? 7 DC A C2 1 ATOM 131 O O2 . DC A 1 7 ? 9.013 1.107 1.749 1.00 10.14 ? 7 DC A O2 1 ATOM 132 N N3 . DC A 1 7 ? 9.726 3.122 2.431 1.00 8.76 ? 7 DC A N3 1 ATOM 133 C C4 . DC A 1 7 ? 9.612 4.145 3.279 1.00 8.14 ? 7 DC A C4 1 ATOM 134 N N4 . DC A 1 7 ? 10.388 5.190 3.074 1.00 7.83 ? 7 DC A N4 1 ATOM 135 C C5 . DC A 1 7 ? 8.847 4.029 4.489 1.00 8.14 ? 7 DC A C5 1 ATOM 136 C C6 . DC A 1 7 ? 8.084 2.922 4.608 1.00 9.30 ? 7 DC A C6 1 ATOM 137 P P . DG A 1 8 ? 9.209 -1.280 8.027 1.00 12.78 ? 8 DG A P 1 ATOM 138 O OP1 . DG A 1 8 ? 9.000 -2.521 8.812 1.00 13.97 ? 8 DG A OP1 1 ATOM 139 O OP2 . DG A 1 8 ? 9.390 0.008 8.725 1.00 13.32 ? 8 DG A OP2 1 ATOM 140 O "O5'" . DG A 1 8 ? 10.525 -1.479 7.096 1.00 11.01 ? 8 DG A "O5'" 1 ATOM 141 C "C5'" . DG A 1 8 ? 10.735 -2.699 6.416 1.00 9.28 ? 8 DG A "C5'" 1 ATOM 142 C "C4'" . DG A 1 8 ? 11.832 -2.546 5.411 1.00 8.19 ? 8 DG A "C4'" 1 ATOM 143 O "O4'" . DG A 1 8 ? 11.483 -1.562 4.442 1.00 7.81 ? 8 DG A "O4'" 1 ATOM 144 C "C3'" . DG A 1 8 ? 13.138 -2.084 6.036 1.00 7.83 ? 8 DG A "C3'" 1 ATOM 145 O "O3'" . DG A 1 8 ? 13.837 -3.180 6.600 1.00 8.14 ? 8 DG A "O3'" 1 ATOM 146 C "C2'" . DG A 1 8 ? 13.827 -1.472 4.834 1.00 7.30 ? 8 DG A "C2'" 1 ATOM 147 C "C1'" . DG A 1 8 ? 12.682 -0.853 4.070 1.00 7.87 ? 8 DG A "C1'" 1 ATOM 148 N N9 . DG A 1 8 ? 12.585 0.589 4.333 1.00 7.04 ? 8 DG A N9 1 ATOM 149 C C8 . DG A 1 8 ? 11.791 1.279 5.230 1.00 7.24 ? 8 DG A C8 1 ATOM 150 N N7 . DG A 1 8 ? 12.031 2.570 5.247 1.00 7.44 ? 8 DG A N7 1 ATOM 151 C C5 . DG A 1 8 ? 13.064 2.743 4.316 1.00 6.97 ? 8 DG A C5 1 ATOM 152 C C6 . DG A 1 8 ? 13.747 3.925 3.890 1.00 6.80 ? 8 DG A C6 1 ATOM 153 O O6 . DG A 1 8 ? 13.590 5.081 4.266 1.00 7.04 ? 8 DG A O6 1 ATOM 154 N N1 . DG A 1 8 ? 14.761 3.641 2.977 1.00 6.30 ? 8 DG A N1 1 ATOM 155 C C2 . DG A 1 8 ? 15.059 2.367 2.483 1.00 6.62 ? 8 DG A C2 1 ATOM 156 N N2 . DG A 1 8 ? 16.062 2.239 1.601 1.00 6.09 ? 8 DG A N2 1 ATOM 157 N N3 . DG A 1 8 ? 14.338 1.284 2.812 1.00 6.75 ? 8 DG A N3 1 ATOM 158 C C4 . DG A 1 8 ? 13.380 1.536 3.737 1.00 6.98 ? 8 DG A C4 1 ATOM 159 P P . DG A 1 9 ? 14.911 -2.928 7.764 1.00 7.79 ? 9 DG A P 1 ATOM 160 O OP1 . DG A 1 9 ? 15.202 -4.283 8.267 1.00 9.71 ? 9 DG A OP1 1 ATOM 161 O OP2 . DG A 1 9 ? 14.410 -1.876 8.686 1.00 9.11 ? 9 DG A OP2 1 ATOM 162 O "O5'" . DG A 1 9 ? 16.227 -2.330 7.048 1.00 7.90 ? 9 DG A "O5'" 1 ATOM 163 C "C5'" . DG A 1 9 ? 17.010 -3.205 6.216 1.00 6.45 ? 9 DG A "C5'" 1 ATOM 164 C "C4'" . DG A 1 9 ? 17.941 -2.387 5.355 1.00 6.17 ? 9 DG A "C4'" 1 ATOM 165 O "O4'" . DG A 1 9 ? 17.238 -1.375 4.601 1.00 6.32 ? 9 DG A "O4'" 1 ATOM 166 C "C3'" . DG A 1 9 ? 19.011 -1.638 6.137 1.00 5.59 ? 9 DG A "C3'" 1 ATOM 167 O "O3'" . DG A 1 9 ? 20.106 -2.476 6.508 1.00 6.11 ? 9 DG A "O3'" 1 ATOM 168 C "C2'" . DG A 1 9 ? 19.375 -0.585 5.112 1.00 5.89 ? 9 DG A "C2'" 1 ATOM 169 C "C1'" . DG A 1 9 ? 18.055 -0.210 4.442 1.00 5.78 ? 9 DG A "C1'" 1 ATOM 170 N N9 . DG A 1 9 ? 17.427 0.950 5.104 1.00 5.56 ? 9 DG A N9 1 ATOM 171 C C8 . DG A 1 9 ? 16.465 0.990 6.090 1.00 6.01 ? 9 DG A C8 1 ATOM 172 N N7 . DG A 1 9 ? 16.052 2.197 6.370 1.00 6.19 ? 9 DG A N7 1 ATOM 173 C C5 . DG A 1 9 ? 16.967 3.010 5.699 1.00 6.05 ? 9 DG A C5 1 ATOM 174 C C6 . DG A 1 9 ? 17.101 4.414 5.700 1.00 5.84 ? 9 DG A C6 1 ATOM 175 O O6 . DG A 1 9 ? 16.465 5.228 6.365 1.00 7.27 ? 9 DG A O6 1 ATOM 176 N N1 . DG A 1 9 ? 18.144 4.837 4.885 1.00 5.66 ? 9 DG A N1 1 ATOM 177 C C2 . DG A 1 9 ? 18.936 4.009 4.122 1.00 5.34 ? 9 DG A C2 1 ATOM 178 N N2 . DG A 1 9 ? 19.946 4.560 3.434 1.00 5.94 ? 9 DG A N2 1 ATOM 179 N N3 . DG A 1 9 ? 18.758 2.690 4.065 1.00 5.26 ? 9 DG A N3 1 ATOM 180 C C4 . DG A 1 9 ? 17.760 2.262 4.875 1.00 5.38 ? 9 DG A C4 1 ATOM 181 P P . DG A 1 10 ? 21.089 -2.076 7.722 1.00 6.35 ? 10 DG A P 1 ATOM 182 O OP1 . DG A 1 10 ? 21.949 -3.303 7.778 1.00 6.53 ? 10 DG A OP1 1 ATOM 183 O OP2 . DG A 1 10 ? 20.269 -1.612 8.874 1.00 6.82 ? 10 DG A OP2 1 ATOM 184 O "O5'" . DG A 1 10 ? 21.910 -0.810 7.141 1.00 6.98 ? 10 DG A "O5'" 1 ATOM 185 C "C5'" . DG A 1 10 ? 22.856 -0.909 6.078 1.00 6.52 ? 10 DG A "C5'" 1 ATOM 186 C "C4'" . DG A 1 10 ? 23.358 0.492 5.737 1.00 6.48 ? 10 DG A "C4'" 1 ATOM 187 O "O4'" . DG A 1 10 ? 22.305 1.378 5.368 1.00 6.00 ? 10 DG A "O4'" 1 ATOM 188 C "C3'" . DG A 1 10 ? 24.130 1.149 6.888 1.00 6.36 ? 10 DG A "C3'" 1 ATOM 189 O "O3'" . DG A 1 10 ? 25.490 0.707 6.960 1.00 7.72 ? 10 DG A "O3'" 1 ATOM 190 C "C2'" . DG A 1 10 ? 23.968 2.612 6.548 1.00 6.48 ? 10 DG A "C2'" 1 ATOM 191 C "C1'" . DG A 1 10 ? 22.596 2.698 5.855 1.00 6.32 ? 10 DG A "C1'" 1 ATOM 192 N N9 . DG A 1 10 ? 21.531 3.105 6.795 1.00 5.88 ? 10 DG A N9 1 ATOM 193 C C8 . DG A 1 10 ? 20.699 2.305 7.547 1.00 6.06 ? 10 DG A C8 1 ATOM 194 N N7 . DG A 1 10 ? 19.722 2.950 8.129 1.00 5.82 ? 10 DG A N7 1 ATOM 195 C C5 . DG A 1 10 ? 19.950 4.273 7.775 1.00 5.69 ? 10 DG A C5 1 ATOM 196 C C6 . DG A 1 10 ? 19.270 5.451 8.185 1.00 5.56 ? 10 DG A C6 1 ATOM 197 O O6 . DG A 1 10 ? 18.268 5.537 8.885 1.00 6.67 ? 10 DG A O6 1 ATOM 198 N N1 . DG A 1 10 ? 19.823 6.593 7.644 1.00 5.73 ? 10 DG A N1 1 ATOM 199 C C2 . DG A 1 10 ? 20.989 6.630 6.892 1.00 5.04 ? 10 DG A C2 1 ATOM 200 N N2 . DG A 1 10 ? 21.406 7.819 6.443 1.00 5.28 ? 10 DG A N2 1 ATOM 201 N N3 . DG A 1 10 ? 21.624 5.533 6.498 1.00 5.20 ? 10 DG A N3 1 ATOM 202 C C4 . DG A 1 10 ? 21.064 4.386 6.977 1.00 5.35 ? 10 DG A C4 1 HETATM 203 CO CO . NCO B 2 . ? 15.671 0.293 11.714 1.00 8.78 ? 201 NCO A CO 1 HETATM 204 N N1 . NCO B 2 . ? 14.013 1.485 11.752 1.00 8.10 ? 201 NCO A N1 1 HETATM 205 N N2 . NCO B 2 . ? 16.852 1.950 11.861 1.00 7.20 ? 201 NCO A N2 1 HETATM 206 N N3 . NCO B 2 . ? 15.737 0.438 9.670 1.00 7.19 ? 201 NCO A N3 1 HETATM 207 N N4 . NCO B 2 . ? 14.465 -1.389 11.535 1.00 7.65 ? 201 NCO A N4 1 HETATM 208 N N5 . NCO B 2 . ? 15.631 0.156 13.780 1.00 8.19 ? 201 NCO A N5 1 HETATM 209 N N6 . NCO B 2 . ? 17.378 -0.855 11.669 1.00 7.01 ? 201 NCO A N6 1 HETATM 210 O O . HOH C 3 . ? 18.587 0.556 9.563 1.00 8.76 ? 101 HOH A O 1 HETATM 211 O O . HOH C 3 . ? 16.467 3.271 9.364 1.00 13.29 ? 102 HOH A O 1 HETATM 212 O O . HOH C 3 . ? 14.431 3.986 11.249 1.00 33.80 ? 103 HOH A O 1 HETATM 213 O O . HOH C 3 . ? 3.016 16.330 10.688 1.00 19.72 ? 104 HOH A O 1 HETATM 214 O O . HOH C 3 . ? 8.344 12.485 2.833 1.00 22.12 ? 105 HOH A O 1 HETATM 215 O O . HOH C 3 . ? 26.484 -0.102 4.323 1.00 9.24 ? 106 HOH A O 1 HETATM 216 O O . HOH C 3 . ? 7.700 12.908 -0.110 1.00 14.15 ? 107 HOH A O 1 HETATM 217 O O . HOH C 3 . ? 12.612 0.018 9.328 1.00 19.79 ? 108 HOH A O 1 HETATM 218 O O . HOH C 3 . ? 11.273 4.237 7.172 1.00 16.72 ? 109 HOH A O 1 HETATM 219 O O . HOH C 3 . ? 13.951 5.427 7.123 1.00 15.63 ? 110 HOH A O 1 HETATM 220 O O . HOH C 3 . ? 3.797 19.113 7.884 1.00 26.92 ? 111 HOH A O 1 HETATM 221 O O . HOH C 3 . ? 16.095 -6.758 7.642 1.00 53.50 ? 112 HOH A O 1 HETATM 222 O O . HOH C 3 . ? 11.803 16.252 -1.481 1.00 27.30 ? 113 HOH A O 1 HETATM 223 O O . HOH C 3 . ? 5.818 17.200 8.067 1.00 20.56 ? 114 HOH A O 1 HETATM 224 O O . HOH C 3 . ? 11.362 22.856 3.381 1.00 32.95 ? 115 HOH A O 1 HETATM 225 O O . HOH C 3 . ? 7.885 14.660 -11.017 1.00 42.08 ? 116 HOH A O 1 HETATM 226 O O . HOH C 3 . ? 10.167 16.254 0.993 1.00 39.84 ? 117 HOH A O 1 HETATM 227 O O . HOH C 3 . ? 10.176 6.840 5.299 1.00 40.11 ? 118 HOH A O 1 HETATM 228 O O . HOH C 3 . ? 0.872 7.533 2.229 1.00 26.89 ? 119 HOH A O 1 HETATM 229 O O . HOH C 3 . ? 9.134 2.623 8.177 1.00 33.35 ? 120 HOH A O 1 HETATM 230 O O . HOH C 3 . ? 7.560 15.303 1.963 1.00 14.68 ? 121 HOH A O 1 HETATM 231 O O . HOH C 3 . ? 10.920 2.995 10.737 1.00 51.21 ? 122 HOH A O 1 HETATM 232 O O . HOH C 3 . ? 1.501 13.249 10.446 1.00 17.33 ? 123 HOH A O 1 HETATM 233 O O . HOH C 3 . ? 5.892 14.189 5.198 1.00 22.79 ? 124 HOH A O 1 HETATM 234 O O . HOH C 3 . ? 9.456 14.019 -6.681 1.00 38.59 ? 125 HOH A O 1 HETATM 235 O O . HOH C 3 . ? 11.146 9.905 5.493 1.00 78.99 ? 126 HOH A O 1 HETATM 236 O O . HOH C 3 . ? 6.925 0.326 0.055 1.00 39.71 ? 127 HOH A O 1 HETATM 237 O O . HOH C 3 . ? 6.359 11.740 7.382 1.00 48.78 ? 128 HOH A O 1 HETATM 238 O O . HOH C 3 . ? 11.471 -0.500 12.540 1.00 58.41 ? 129 HOH A O 1 HETATM 239 O O . HOH C 3 . ? 10.347 13.845 -2.938 1.00 62.76 ? 130 HOH A O 1 HETATM 240 O O . HOH C 3 . ? 13.844 2.402 8.154 1.00 15.49 ? 131 HOH A O 1 HETATM 241 O O . HOH C 3 . ? 12.571 4.585 9.376 1.00 25.15 ? 132 HOH A O 1 HETATM 242 O O . HOH C 3 . ? 7.562 6.527 7.847 1.00 42.71 ? 133 HOH A O 1 HETATM 243 O O . HOH C 3 . ? 4.833 2.137 1.540 1.00 45.86 ? 134 HOH A O 1 #
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