Acta Crystallographica Section D
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STRUCTURAL BIOLOGY
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STRUCTURAL
BIOLOGY
Volume 57
|
Part 5
|
May 2001
|
Pages 755–758
https://doi.org/10.1107/S0907444901003134
Open
access
ISSN: 2059-7983
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STRUCTURAL
BIOLOGY
Volume 57
|
Part 5
|
May 2001
|
Pages 755–758
https://doi.org/10.1107/S0907444901003134
Open
access
ISSN: 2059-7983
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data_1E9W # _entry.id 1E9W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1E9W pdb_00001e9w 10.2210/pdb1e9w/pdb PDBE EBI-5497 ? ? WWPDB D_1290005497 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-03-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-11-30 4 'Structure model' 2 0 2019-04-24 5 'Structure model' 2 1 2019-05-22 6 'Structure model' 2 2 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 2 'Structure model' 'Version format compliance' 6 3 'Structure model' Other 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' Other 10 4 'Structure model' 'Polymer sequence' 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Refinement description' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Database references' 15 6 'Structure model' 'Derived calculations' 16 6 'Structure model' Other 17 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_PDB_rev 2 4 'Structure model' database_PDB_rev_record 3 4 'Structure model' entity_poly 4 4 'Structure model' pdbx_database_proc 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_seq_map_depositor_info 7 4 'Structure model' struct_conn 8 5 'Structure model' refine 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 6 'Structure model' database_2 12 6 'Structure model' pdbx_database_status 13 6 'Structure model' pdbx_initial_refinement_model 14 6 'Structure model' struct_conn 15 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 2 4 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 4 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_refine.pdbx_ls_cross_valid_method' 6 6 'Structure model' '_database_2.pdbx_DOI' 7 6 'Structure model' '_database_2.pdbx_database_accession' 8 6 'Structure model' '_pdbx_database_status.status_code_sf' 9 6 'Structure model' '_struct_conn.pdbx_dist_value' 10 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 18 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 19 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1E9W _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-10-27 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1D8T unspecified 'CRYSTAL STRUCTURE OF THE ELONGATION FACTOR EF-TU-MGGDP COMPLEXED WITH THE THIOPEPTIDE GE2270A.' PDB 1OLN unspecified 'SOLUTION STRUCTURE OF THIOPEPTIDE THIOSTREPTON BINDING TO L11 SUBSTRATE FROM 50S RIBOSOMAL RNA' PDB 2C77 unspecified 'CRYSTAL STRUCTURE OF THE ELONGATION FACTOR EF-TU-GNP COMPLEXED WITH THIOPEPTIDE GE2270A.' PDB 2JQ7 unspecified 'SOLUTION STRUCTURE OF THE COMPLEX OF THE THIOPEPTIDE THIOSTREPTON AND RIBOSOMAL L11-RNA' PDB 2ZJP unspecified 'CRYSTAL STRUCTURE OF NOSIHEPTIDE COMPLEXED WITH THE LARGE RIBOSOMAL SUBUNIT OF DEINOCOCCUS RADIODURANS' PDB 3CF5 unspecified 'CRYSTAL STRUCTURE OF RIBOSOMAL L11-RNA COMPLEXED WITH THE THIOPEPTIDE THIOSTREPTON' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bond, C.S.' 1 'Shaw, M.P.' 2 'Alphey, M.S.' 3 'Hunter, W.N.' 4 # _citation.id primary _citation.title 'Structure of the Macrocycle Thiostrepton Solved Using the Anomalous Dispersive Contribution from Sulfur' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 57 _citation.page_first 755 _citation.page_last ? _citation.year 2001 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11320328 _citation.pdbx_database_id_DOI 10.1107/S0907444901003134 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bond, C.S.' 1 ? primary 'Shaw, M.P.' 2 ? primary 'Alphey, M.S.' 3 ? primary 'Hunter, W.N.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat THIOSTREPTON 1805.985 1 ? ? ? ? 2 water nat water 18.015 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ALANINAMIDE, BRYAMYCIN, THIACTIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(QUA)IA(DHA)AS(BB9)T(DBU)(DCY)(TS9)(BB9)T(BB9)(MH6)(BB9)(DHA)(DHA)(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XIASASCTTCICTCSCSSX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 QUA n 1 2 ILE n 1 3 ALA n 1 4 DHA n 1 5 ALA n 1 6 SER n 1 7 BB9 n 1 8 THR n 1 9 DBU n 1 10 DCY n 1 11 TS9 n 1 12 BB9 n 1 13 THR n 1 14 BB9 n 1 15 MH6 n 1 16 BB9 n 1 17 DHA n 1 18 DHA n 1 19 NH2 n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'STREPTOMYCES AZUREUS' _entity_src_nat.pdbx_ncbi_taxonomy_id 146537 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details CALBIOCHEM # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 BB9 'peptide linking' n '(2Z)-2-amino-3-sulfanylprop-2-enoic acid' ? 'C3 H5 N O2 S' 119.142 DBU 'peptide linking' n '(2Z)-2-AMINOBUT-2-ENOIC ACID' Z-DEHYDROBUTYRINE 'C4 H7 N O2' 101.104 DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158 DHA 'peptide linking' n '2-AMINO-ACRYLIC ACID' 2,3-DIDEHYDROALANINE 'C3 H5 N O2' 87.077 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 MH6 'peptide linking' n '3-hydroxy-2-iminopropanoic acid' ? 'C3 H5 N O3' 103.077 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 QUA non-polymer . '8-HYDROXY-4-(1-HYDROXYETHYL)QUINOLINE-2-CARBOXYLIC ACID' ? 'C12 H13 N O4' 235.236 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TS9 'L-peptide linking' n '(2S,3S,4R)-2-amino-3,4-dihydroxy-3-methylpentanoic acid' ? 'C6 H13 N O4' 163.172 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 QUA 1 0 0 QUA QUA A . n A 1 2 ILE 2 1 1 ILE ILE A . n A 1 3 ALA 3 2 2 ALA ALA A . n A 1 4 DHA 4 3 3 DHA DHA A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 BB9 7 6 6 BB9 BB9 A . n A 1 8 THR 8 7 7 THR THR A . n A 1 9 DBU 9 8 8 DBU DBU A . n A 1 10 DCY 10 9 9 DCY DCY A . n A 1 11 TS9 11 10 10 TS9 TS9 A . n A 1 12 BB9 12 11 11 BB9 BB9 A . n A 1 13 THR 13 12 12 THR THR A . n A 1 14 BB9 14 13 13 BB9 BB9 A . n A 1 15 MH6 15 14 14 MH6 MH6 A . n A 1 16 BB9 16 15 15 BB9 BB9 A . n A 1 17 DHA 17 16 16 DHA DHA A . n A 1 18 DHA 18 17 17 DHA DHA A . n A 1 19 NH2 19 18 18 NH2 NH2 A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SHELX phasing . ? 4 # _cell.entry_id 1E9W _cell.length_a 26.577 _cell.length_b 26.577 _cell.length_c 27.436 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E9W _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1E9W _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.46 _exptl_crystal.density_percent_sol 14.8 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1ML 15.38MG/ML THIOSTREPTON IN CHLOROFORM_ISOAMYL ALCOHOL + 100 MICROL GLYCEROL + 200 MICROL ETHANOL. BATCH METHOD, pH 7.00' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.73 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength 0.73 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1E9W _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.020 _reflns.number_obs 5232 _reflns.number_all ? _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs 0.03300 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.8000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.300 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.02 _reflns_shell.d_res_low 1.04 _reflns_shell.percent_possible_all 74.6 _reflns_shell.Rmerge_I_obs 0.15200 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.400 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1E9W _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 8391 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 1.02 _refine.ls_percent_reflns_obs 96.7 _refine.ls_R_factor_obs 0.1124 _refine.ls_R_factor_all 0.1122 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.1423 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 825 _refine.ls_number_parameters 1057 _refine.ls_number_restraints 1023 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-2' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 'SEE REFERENCE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case 'RESIDUE 16 RESTRAINED USING GEOMETRY DERIVED FROM CSD (SEE REFERENCE)' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 1E9W _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 115.33 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 114 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 118 _refine_hist.d_res_high 1.02 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.047 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0001 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.051 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.037 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 1E9W _pdbx_refine.R_factor_all_no_cutoff 0.1122 _pdbx_refine.R_factor_obs_no_cutoff 0.1124 _pdbx_refine.free_R_factor_no_cutoff 0.1423 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 9.8 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 825 _pdbx_refine.R_factor_all_4sig_cutoff 0.1069 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1071 _pdbx_refine.free_R_factor_4sig_cutoff 0.1362 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 9.8 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 755 _pdbx_refine.number_reflns_obs_4sig_cutoff 7729 # _database_PDB_matrix.entry_id 1E9W _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1E9W _struct.title 'Structure of the macrocycle thiostrepton solved using the anomalous dispersive contribution from sulfur' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1E9W _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'ANTIBIOTIC, THIOPEPTIDE, ANTIBACTERIAL, THIAZOLE, THIAZOLINE, OXAZOLE, RIBOSOME, TRANSLATION INHIBITION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THCL_STRAJ _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P0C8P8 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1E9W _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 18 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0C8P8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 17 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 17 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A QUA 1 C7 ? ? ? 1_555 A ILE 2 N ? ? A QUA 0 A ILE 1 1_555 ? ? ? ? ? ? ? 1.499 ? ? covale2 covale one ? A QUA 1 C11 ? ? ? 1_555 A THR 13 OG1 ? ? A QUA 0 A THR 12 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A ALA 3 C ? ? ? 1_555 A DHA 4 N ? ? A ALA 2 A DHA 3 1_555 ? ? ? ? ? ? ? 1.383 ? ? covale4 covale both ? A DHA 4 C ? ? ? 1_555 A ALA 5 N ? ? A DHA 3 A ALA 4 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale5 covale one ? A SER 6 C ? ? ? 1_555 A BB9 7 SG ? ? A SER 5 A BB9 6 1_555 ? ? ? ? ? ? ? 1.752 ? ? covale6 covale both ? A SER 6 C ? ? ? 1_555 A BB9 7 N ? ? A SER 5 A BB9 6 1_555 ? ? ? ? ? ? ? 1.305 ? ? covale7 covale one ? A SER 6 CA ? ? ? 1_555 A BB9 14 C ? ? A SER 5 A BB9 13 1_555 ? ? ? ? ? ? ? 1.575 ? ? covale8 covale one ? A SER 6 CB ? ? ? 1_555 A MH6 15 CB ? ? A SER 5 A MH6 14 1_555 ? ? ? ? ? ? ? 1.523 ? ? covale9 covale both ? A BB9 7 C ? ? ? 1_555 A THR 8 N ? ? A BB9 6 A THR 7 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale10 covale both ? A THR 8 C ? ? ? 1_555 A DBU 9 N ? ? A THR 7 A DBU 8 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale11 covale one ? A DBU 9 C ? ? ? 1_555 A DCY 10 SG ? ? A DBU 8 A DCY 9 1_555 ? ? ? ? ? ? ? 1.750 ? ? covale12 covale both ? A DBU 9 C ? ? ? 1_555 A DCY 10 N ? ? A DBU 8 A DCY 9 1_555 ? ? ? ? ? ? ? 1.293 ? ? covale13 covale both ? A DCY 10 C ? ? ? 1_555 A TS9 11 N ? ? A DCY 9 A TS9 10 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale one ? A TS9 11 C ? ? ? 1_555 A BB9 12 SG ? ? A TS9 10 A BB9 11 1_555 ? ? ? ? ? ? ? 1.750 ? ? covale15 covale both ? A TS9 11 C ? ? ? 1_555 A BB9 12 N ? ? A TS9 10 A BB9 11 1_555 ? ? ? ? ? ? ? 1.279 ? ? covale16 covale both ? A BB9 12 C ? ? ? 1_555 A THR 13 N ? ? A BB9 11 A THR 12 1_555 ? ? ? ? ? ? ? 1.359 ? ? covale17 covale one ? A THR 13 C ? ? ? 1_555 A BB9 14 SG ? ? A THR 12 A BB9 13 1_555 ? ? ? ? ? ? ? 1.709 ? ? covale18 covale both ? A THR 13 C ? ? ? 1_555 A BB9 14 N ? ? A THR 12 A BB9 13 1_555 ? ? ? ? ? ? ? 1.292 ? ? covale19 covale both ? A BB9 14 C ? ? ? 1_555 A MH6 15 N ? ? A BB9 13 A MH6 14 1_555 ? ? ? ? ? ? ? 1.475 ? ? covale20 covale one ? A MH6 15 C ? ? ? 1_555 A BB9 16 SG ? ? A MH6 14 A BB9 15 1_555 ? ? ? ? ? ? ? 1.650 ? ? covale21 covale both ? A MH6 15 C ? ? ? 1_555 A BB9 16 N ? ? A MH6 14 A BB9 15 1_555 ? ? ? ? ? ? ? 1.300 ? ? covale22 covale both ? A BB9 16 C ? ? ? 1_555 A DHA 17 N ? ? A BB9 15 A DHA 16 1_555 ? ? ? ? ? ? ? 1.380 ? ? covale23 covale both ? A DHA 17 C ? ? ? 1_555 A DHA 18 N ? ? A DHA 16 A DHA 17 1_555 ? ? ? ? ? ? ? 1.229 ? ? covale24 covale both ? A DHA 18 C ? ? ? 1_555 A NH2 19 N ? ? A DHA 17 A NH2 18 1_555 ? ? ? ? ? ? ? 1.350 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A QUA 0 ? 15 'BINDING SITE FOR RESIDUE QUA A 0' AC2 Software A NH2 18 ? 3 'BINDING SITE FOR RESIDUE NH2 A 18' AC3 Software ? ? ? ? 11 'BINDING SITE FOR CHAIN A OF THIOSTREPTON' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 ILE A 2 ? ILE A 1 . ? 1_555 ? 2 AC1 15 ALA A 3 ? ALA A 2 . ? 1_555 ? 3 AC1 15 DHA A 4 ? DHA A 3 . ? 1_555 ? 4 AC1 15 DHA A 4 ? DHA A 3 . ? 3_554 ? 5 AC1 15 ALA A 5 ? ALA A 4 . ? 3_554 ? 6 AC1 15 ALA A 5 ? ALA A 4 . ? 1_555 ? 7 AC1 15 SER A 6 ? SER A 5 . ? 1_555 ? 8 AC1 15 BB9 A 7 ? BB9 A 6 . ? 1_555 ? 9 AC1 15 THR A 8 ? THR A 7 . ? 1_555 ? 10 AC1 15 TS9 A 11 ? TS9 A 10 . ? 1_555 ? 11 AC1 15 BB9 A 12 ? BB9 A 11 . ? 6_465 ? 12 AC1 15 THR A 13 ? THR A 12 . ? 1_555 ? 13 AC1 15 BB9 A 14 ? BB9 A 13 . ? 1_555 ? 14 AC1 15 NH2 A 19 ? NH2 A 18 . ? 6_455 ? 15 AC1 15 HOH B . ? HOH A 2004 . ? 1_555 ? 16 AC2 3 QUA A 1 ? QUA A 0 . ? 6_555 ? 17 AC2 3 BB9 A 7 ? BB9 A 6 . ? 7_555 ? 18 AC2 3 DHA A 18 ? DHA A 17 . ? 1_555 ? 19 AC3 11 QUA A 1 ? QUA A 0 . ? 1_555 ? 20 AC3 11 QUA A 1 ? QUA A 0 . ? 4_455 ? 21 AC3 11 QUA A 1 ? QUA A 0 . ? 6_565 ? 22 AC3 11 NH2 A 19 ? NH2 A 18 . ? 1_555 ? 23 AC3 11 NH2 A 19 ? NH2 A 18 . ? 7_555 ? 24 AC3 11 HOH B . ? HOH A 2001 . ? 8_665 ? 25 AC3 11 HOH B . ? HOH A 2001 . ? 1_555 ? 26 AC3 11 HOH B . ? HOH A 2002 . ? 8_665 ? 27 AC3 11 HOH B . ? HOH A 2002 . ? 1_555 ? 28 AC3 11 HOH B . ? HOH A 2003 . ? 1_555 ? 29 AC3 11 HOH B . ? HOH A 2004 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 BB9 _pdbx_validate_rmsd_bond.auth_seq_id_1 13 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MH6 _pdbx_validate_rmsd_bond.auth_seq_id_2 14 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.475 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.139 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? 71.84 80.87 2 1 DCY A 9 ? ? -147.29 -14.74 3 1 TS9 A 10 ? ? -107.46 -65.52 # _pdbx_molecule_features.prd_id PRD_000223 _pdbx_molecule_features.name THIOSTREPTON _pdbx_molecule_features.type Thiopeptide _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;Thiostrepton is a hetrocyclic thiopeptide belonging to the thiocillin family, consisting of four thiazole, one thiozoline and one piperideine rings. A modified quinoline linked to main-chain residue 1 and side-chain of residue 12. Post translational maturation of thiazole and oxazole containing antibiotics involves the enzymic condensation of a Cys or Ser with the alpha-carbonyl of the preceding amino acid to form a thioether or ether bond, then dehydration to form a double bond with the alpha-amino nitrogen. Thiazoline or oxazoline ring are dehydrogenated to form thiazole or oxazole rings. the pyridinyl involves the cross-linking of a Ser and a Cys-Ser pair usually separated by 7 or 8 residues along the peptide chain. The Ser residues are dehydrated to didehydroalanines, then bonded between their beta carbons. The alpha carbonyl of the Cys condenses with alpha carbon of the first Ser to form a pyridinyl ring. The ring may be mutiply dehydrogenated to form a pyridine ring with loss of the amino nitrogen of the first Ser. The amidation of Ser-17 probably does not occur by the same mechanism, oxidative cleavage of glycine, as in eukaryotes. ; # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000223 _pdbx_molecule.asym_id A # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A DHA 4 A DHA 3 ? SER '2-AMINO-ACRYLIC ACID' 2 A BB9 7 A BB9 6 ? CYS ? 3 A DBU 9 A DBU 8 ? THR '(2Z)-2-AMINOBUT-2-ENOIC ACID' 4 A TS9 11 A TS9 10 ? ILE ? 5 A BB9 12 A BB9 11 ? CYS ? 6 A BB9 14 A BB9 13 ? CYS ? 7 A MH6 15 A MH6 14 ? SER '3-HYDROXY-2-IMINOPROPANOIC ACID' 8 A BB9 16 A BB9 15 ? CYS ? 9 A DHA 17 A DHA 16 ? SER '2-AMINO-ACRYLIC ACID' 10 A DHA 18 A DHA 17 ? SER '2-AMINO-ACRYLIC ACID' # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2001 ? B HOH . 2 1 A HOH 2002 ? B HOH . # _pdbx_entry_details.entry_id 1E9W _pdbx_entry_details.compound_details ;THIOSTREPTON IS A MEMBER OF A SULPHUR-RICH HETEROCYCLIC PEPTIDES CLASS. ALL SHARE A MACROCYLIC CORE, CONSISTING OF A NITROGEN CONTAINING, SIX-MEMBERED RING CENTRAL TO DEHYDROAMINO ACIDS AND A SUBSET OF FIVE MEMBER RING STRUCTURES INCLUDING THIAZOLES, THIAZOLINES AND OXAZOLES. HERE, THIOSTREPTON IS REPRESENTED BY THE SEQUENCE (SEQRES) GROUP: 1 NAME: THIOSTREPTON CHAIN: A COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 0 TO 18 DESCRIPTION: THIOSTREPTON IS A HETROCYCLIC THIOPEPTIDE, CONSISTING OF FOUR THIAZOLES ONE THIOZOLINE ONE PIPERIDEINE RINGS. A MODIFIED QUINOLINE LINKED TO MAIN-CHAIN RESIDUE 1 AND SIDE-CHAIN OF RESIDUE 12. THE OBSERVED C-TERMINAL AMINO GROUP NH2(18) IS LIKELY TO BE A POST-TRANSLATIONAL DECARBOXYLATED REMNANT OF A SER C-TERMINAL RESIDUE ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 BB9 N N N N 14 BB9 CA C N N 15 BB9 C C N N 16 BB9 O O N N 17 BB9 CB C N N 18 BB9 SG S N N 19 BB9 OXT O N N 20 BB9 H H N N 21 BB9 H2 H N N 22 BB9 HB H N N 23 BB9 HXT H N N 24 BB9 HG H N N 25 DBU N N N N 26 DBU CA C N N 27 DBU CB C N N 28 DBU CG C N N 29 DBU C C N N 30 DBU O O N N 31 DBU OXT O N N 32 DBU H H N N 33 DBU H2 H N N 34 DBU HB H N N 35 DBU HG1 H N N 36 DBU HG2 H N N 37 DBU HG3 H N N 38 DBU HXT H N N 39 DCY N N N N 40 DCY CA C N S 41 DCY C C N N 42 DCY O O N N 43 DCY CB C N N 44 DCY SG S N N 45 DCY OXT O N N 46 DCY H H N N 47 DCY H2 H N N 48 DCY HA H N N 49 DCY HB2 H N N 50 DCY HB3 H N N 51 DCY HG H N N 52 DCY HXT H N N 53 DHA N N N N 54 DHA CA C N N 55 DHA CB C N N 56 DHA C C N N 57 DHA O O N N 58 DHA OXT O N N 59 DHA H H N N 60 DHA H2 H N N 61 DHA HB1 H N N 62 DHA HB2 H N N 63 DHA HXT H N N 64 HOH O O N N 65 HOH H1 H N N 66 HOH H2 H N N 67 ILE N N N N 68 ILE CA C N S 69 ILE C C N N 70 ILE O O N N 71 ILE CB C N S 72 ILE CG1 C N N 73 ILE CG2 C N N 74 ILE CD1 C N N 75 ILE OXT O N N 76 ILE H H N N 77 ILE H2 H N N 78 ILE HA H N N 79 ILE HB H N N 80 ILE HG12 H N N 81 ILE HG13 H N N 82 ILE HG21 H N N 83 ILE HG22 H N N 84 ILE HG23 H N N 85 ILE HD11 H N N 86 ILE HD12 H N N 87 ILE HD13 H N N 88 ILE HXT H N N 89 MH6 N N N N 90 MH6 CA C N N 91 MH6 C C N N 92 MH6 CB C N N 93 MH6 OG O N N 94 MH6 O O N N 95 MH6 OXT O N N 96 MH6 H H N N 97 MH6 HB2 H N N 98 MH6 HB3 H N N 99 MH6 HXT H N N 100 MH6 HG H N N 101 NH2 N N N N 102 NH2 HN1 H N N 103 NH2 HN2 H N N 104 QUA O12 O N N 105 QUA C11 C N N 106 QUA C2 C Y N 107 QUA N1 N Y N 108 QUA C3 C Y N 109 QUA C9 C Y N 110 QUA C4 C Y N 111 QUA C8 C N S 112 QUA C10 C Y N 113 QUA O16 O N N 114 QUA C7 C N N 115 QUA C13 C N S 116 QUA O15 O N N 117 QUA C5 C N N 118 QUA C14 C N N 119 QUA C6 C N N 120 QUA "O1'" O N N 121 QUA HC3 H N N 122 QUA HC8 H N N 123 QUA H16 H N N 124 QUA HC71 H N N 125 QUA HC72 H N N 126 QUA H13 H N N 127 QUA H15 H N N 128 QUA HC5 H N N 129 QUA H141 H N N 130 QUA H142 H N N 131 QUA H143 H N N 132 QUA HC6 H N N 133 QUA "H1'" H N N 134 SER N N N N 135 SER CA C N S 136 SER C C N N 137 SER O O N N 138 SER CB C N N 139 SER OG O N N 140 SER OXT O N N 141 SER H H N N 142 SER H2 H N N 143 SER HA H N N 144 SER HB2 H N N 145 SER HB3 H N N 146 SER HG H N N 147 SER HXT H N N 148 THR N N N N 149 THR CA C N S 150 THR C C N N 151 THR O O N N 152 THR CB C N R 153 THR OG1 O N N 154 THR CG2 C N N 155 THR OXT O N N 156 THR H H N N 157 THR H2 H N N 158 THR HA H N N 159 THR HB H N N 160 THR HG1 H N N 161 THR HG21 H N N 162 THR HG22 H N N 163 THR HG23 H N N 164 THR HXT H N N 165 TS9 N N N N 166 TS9 CA C N S 167 TS9 C C N N 168 TS9 CB C N S 169 TS9 OG3 O N N 170 TS9 CG2 C N N 171 TS9 CG1 C N R 172 TS9 OD2 O N N 173 TS9 CD1 C N N 174 TS9 OXT O N N 175 TS9 O O N N 176 TS9 H H N N 177 TS9 H2 H N N 178 TS9 HA H N N 179 TS9 HXT H N N 180 TS9 HG3 H N N 181 TS9 HG21 H N N 182 TS9 HG22 H N N 183 TS9 HG23 H N N 184 TS9 HG1 H N N 185 TS9 HD2 H N N 186 TS9 HD11 H N N 187 TS9 HD12 H N N 188 TS9 HD13 H N N 189 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 BB9 N CA sing N N 13 BB9 CA C sing N N 14 BB9 CA CB doub N N 15 BB9 C O doub N N 16 BB9 C OXT sing N Z 17 BB9 CB SG sing N N 18 BB9 N H sing N N 19 BB9 N H2 sing N N 20 BB9 CB HB sing N N 21 BB9 OXT HXT sing N N 22 BB9 SG HG sing N N 23 DBU N CA sing N N 24 DBU N H sing N N 25 DBU N H2 sing N N 26 DBU CA CB doub N Z 27 DBU CA C sing N N 28 DBU CB CG sing N N 29 DBU CB HB sing N N 30 DBU CG HG1 sing N N 31 DBU CG HG2 sing N N 32 DBU CG HG3 sing N N 33 DBU C O doub N N 34 DBU C OXT sing N N 35 DBU OXT HXT sing N N 36 DCY N CA sing N N 37 DCY N H sing N N 38 DCY N H2 sing N N 39 DCY CA C sing N N 40 DCY CA CB sing N N 41 DCY CA HA sing N N 42 DCY C O doub N N 43 DCY C OXT sing N N 44 DCY CB SG sing N N 45 DCY CB HB2 sing N N 46 DCY CB HB3 sing N N 47 DCY SG HG sing N N 48 DCY OXT HXT sing N N 49 DHA N CA sing N N 50 DHA N H sing N N 51 DHA N H2 sing N N 52 DHA CA CB doub N N 53 DHA CA C sing N N 54 DHA CB HB1 sing N N 55 DHA CB HB2 sing N N 56 DHA C O doub N N 57 DHA C OXT sing N N 58 DHA OXT HXT sing N N 59 HOH O H1 sing N N 60 HOH O H2 sing N N 61 ILE N CA sing N N 62 ILE N H sing N N 63 ILE N H2 sing N N 64 ILE CA C sing N N 65 ILE CA CB sing N N 66 ILE CA HA sing N N 67 ILE C O doub N N 68 ILE C OXT sing N N 69 ILE CB CG1 sing N N 70 ILE CB CG2 sing N N 71 ILE CB HB sing N N 72 ILE CG1 CD1 sing N N 73 ILE CG1 HG12 sing N N 74 ILE CG1 HG13 sing N N 75 ILE CG2 HG21 sing N N 76 ILE CG2 HG22 sing N N 77 ILE CG2 HG23 sing N N 78 ILE CD1 HD11 sing N N 79 ILE CD1 HD12 sing N N 80 ILE CD1 HD13 sing N N 81 ILE OXT HXT sing N N 82 MH6 N CA doub N N 83 MH6 CA C sing N N 84 MH6 CA CB sing N N 85 MH6 C O doub N N 86 MH6 C OXT sing N N 87 MH6 CB OG sing N N 88 MH6 N H sing N N 89 MH6 CB HB2 sing N N 90 MH6 CB HB3 sing N N 91 MH6 OXT HXT sing N N 92 MH6 OG HG sing N N 93 NH2 N HN1 sing N N 94 NH2 N HN2 sing N N 95 QUA O12 C11 doub N N 96 QUA C11 C2 sing N N 97 QUA C11 "O1'" sing N N 98 QUA C2 N1 doub Y N 99 QUA C2 C3 sing Y N 100 QUA N1 C9 sing Y N 101 QUA C3 C4 doub Y N 102 QUA C3 HC3 sing N N 103 QUA C9 C8 sing N N 104 QUA C9 C10 doub Y N 105 QUA C4 C10 sing Y N 106 QUA C4 C13 sing N N 107 QUA C8 O16 sing N N 108 QUA C8 C7 sing N N 109 QUA C8 HC8 sing N N 110 QUA C10 C5 sing N N 111 QUA O16 H16 sing N N 112 QUA C7 C6 sing N N 113 QUA C7 HC71 sing N N 114 QUA C7 HC72 sing N N 115 QUA C13 O15 sing N N 116 QUA C13 C14 sing N N 117 QUA C13 H13 sing N N 118 QUA O15 H15 sing N N 119 QUA C5 C6 doub N N 120 QUA C5 HC5 sing N N 121 QUA C14 H141 sing N N 122 QUA C14 H142 sing N N 123 QUA C14 H143 sing N N 124 QUA C6 HC6 sing N N 125 QUA "O1'" "H1'" sing N N 126 SER N CA sing N N 127 SER N H sing N N 128 SER N H2 sing N N 129 SER CA C sing N N 130 SER CA CB sing N N 131 SER CA HA sing N N 132 SER C O doub N N 133 SER C OXT sing N N 134 SER CB OG sing N N 135 SER CB HB2 sing N N 136 SER CB HB3 sing N N 137 SER OG HG sing N N 138 SER OXT HXT sing N N 139 THR N CA sing N N 140 THR N H sing N N 141 THR N H2 sing N N 142 THR CA C sing N N 143 THR CA CB sing N N 144 THR CA HA sing N N 145 THR C O doub N N 146 THR C OXT sing N N 147 THR CB OG1 sing N N 148 THR CB CG2 sing N N 149 THR CB HB sing N N 150 THR OG1 HG1 sing N N 151 THR CG2 HG21 sing N N 152 THR CG2 HG22 sing N N 153 THR CG2 HG23 sing N N 154 THR OXT HXT sing N N 155 TS9 N CA sing N N 156 TS9 CA C sing N N 157 TS9 CA CB sing N N 158 TS9 C OXT sing N N 159 TS9 C O doub N N 160 TS9 CB OG3 sing N N 161 TS9 CB CG2 sing N N 162 TS9 CB CG1 sing N N 163 TS9 CG1 OD2 sing N N 164 TS9 CG1 CD1 sing N N 165 TS9 N H sing N N 166 TS9 N H2 sing N N 167 TS9 CA HA sing N N 168 TS9 OXT HXT sing N N 169 TS9 OG3 HG3 sing N N 170 TS9 CG2 HG21 sing N N 171 TS9 CG2 HG22 sing N N 172 TS9 CG2 HG23 sing N N 173 TS9 CG1 HG1 sing N N 174 TS9 OD2 HD2 sing N N 175 TS9 CD1 HD11 sing N N 176 TS9 CD1 HD12 sing N N 177 TS9 CD1 HD13 sing N N 178 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'SEE REFERENCE' # _atom_sites.entry_id 1E9W _atom_sites.fract_transf_matrix[1][1] 0.037627 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.037627 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.036448 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 O O12 . QUA A 1 1 ? 5.986 15.455 3.268 1.00 5.69 ? 0 QUA A O12 1 HETATM 2 C C11 . QUA A 1 1 ? 5.489 16.562 3.304 1.00 4.96 ? 0 QUA A C11 1 HETATM 3 C C2 . QUA A 1 1 ? 4.026 16.812 3.116 1.00 5.41 ? 0 QUA A C2 1 HETATM 4 N N1 . QUA A 1 1 ? 3.556 18.058 3.277 1.00 5.15 ? 0 QUA A N1 1 HETATM 5 C C3 . QUA A 1 1 ? 3.231 15.694 2.762 1.00 5.48 ? 0 QUA A C3 1 HETATM 6 C C9 . QUA A 1 1 ? 2.214 18.239 3.063 1.00 5.35 ? 0 QUA A C9 1 HETATM 7 C C4 . QUA A 1 1 ? 1.913 15.885 2.561 1.00 6.30 ? 0 QUA A C4 1 HETATM 8 C C8 . QUA A 1 1 ? 1.776 19.658 3.083 1.00 5.60 ? 0 QUA A C8 1 HETATM 9 C C10 . QUA A 1 1 ? 1.347 17.197 2.689 1.00 5.70 ? 0 QUA A C10 1 HETATM 10 O O16 . QUA A 1 1 ? 1.918 20.224 1.792 1.00 5.73 ? 0 QUA A O16 1 HETATM 11 C C7 . QUA A 1 1 ? 0.246 19.806 3.460 1.00 6.78 ? 0 QUA A C7 1 HETATM 12 C C13 . QUA A 1 1 ? 1.008 14.660 2.217 1.00 7.60 ? 0 QUA A C13 1 HETATM 13 O O15 . QUA A 1 1 ? 1.706 13.660 1.672 1.00 12.39 ? 0 QUA A O15 1 HETATM 14 C C5 . QUA A 1 1 ? -0.050 17.569 2.444 1.00 7.11 ? 0 QUA A C5 1 HETATM 15 C C14 . QUA A 1 1 ? 0.236 14.225 3.454 1.00 12.59 ? 0 QUA A C14 1 HETATM 16 C C6 . QUA A 1 1 ? -0.559 18.707 2.781 1.00 6.74 ? 0 QUA A C6 1 ATOM 17 N N . ILE A 1 2 ? 0.045 19.626 4.935 1.00 6.15 ? 1 ILE A N 1 ATOM 18 C CA . ILE A 1 2 ? 0.719 20.679 5.730 1.00 6.35 ? 1 ILE A CA 1 ATOM 19 C C . ILE A 1 2 ? 1.938 20.138 6.434 1.00 5.87 ? 1 ILE A C 1 ATOM 20 O O . ILE A 1 2 ? 2.768 20.870 6.961 1.00 7.23 ? 1 ILE A O 1 ATOM 21 C CB . ILE A 1 2 ? -0.196 21.406 6.740 1.00 7.69 ? 1 ILE A CB 1 ATOM 22 C CG1 . ILE A 1 2 ? -0.861 20.395 7.643 1.00 10.72 ? 1 ILE A CG1 1 ATOM 23 C CG2 . ILE A 1 2 ? -1.194 22.309 6.006 1.00 8.64 ? 1 ILE A CG2 1 ATOM 24 C CD1 . ILE A 1 2 ? -1.499 21.046 8.972 1.00 20.14 ? 1 ILE A CD1 1 ATOM 25 N N . ALA A 1 3 ? 2.085 18.779 6.401 1.00 6.28 ? 2 ALA A N 1 ATOM 26 C CA . ALA A 1 3 ? 3.240 18.131 6.939 1.00 7.24 ? 2 ALA A CA 1 ATOM 27 C C . ALA A 1 3 ? 3.107 16.623 6.451 1.00 6.13 ? 2 ALA A C 1 ATOM 28 O O . ALA A 1 3 ? 2.088 16.161 6.076 1.00 7.06 ? 2 ALA A O 1 ATOM 29 C CB . ALA A 1 3 ? 3.200 18.048 8.489 1.00 10.02 ? 2 ALA A CB 1 HETATM 30 N N . DHA A 1 4 ? 4.320 15.965 6.540 1.00 6.10 ? 3 DHA A N 1 HETATM 31 C CA . DHA A 1 4 ? 4.571 14.641 6.101 1.00 6.09 ? 3 DHA A CA 1 HETATM 32 C CB . DHA A 1 4 ? 3.649 13.727 5.845 1.00 6.68 ? 3 DHA A CB 1 HETATM 33 C C . DHA A 1 4 ? 6.042 14.493 5.995 1.00 5.59 ? 3 DHA A C 1 HETATM 34 O O . DHA A 1 4 ? 6.808 15.445 6.291 1.00 6.40 ? 3 DHA A O 1 ATOM 35 N N . ALA A 1 5 ? 6.513 13.340 5.479 1.00 6.08 ? 4 ALA A N 1 ATOM 36 C CA . ALA A 1 5 ? 7.883 13.229 4.974 1.00 6.24 ? 4 ALA A CA 1 ATOM 37 C C . ALA A 1 5 ? 7.760 12.622 3.557 1.00 6.70 ? 4 ALA A C 1 ATOM 38 O O . ALA A 1 5 ? 7.219 11.560 3.383 1.00 8.22 ? 4 ALA A O 1 ATOM 39 C CB . ALA A 1 5 ? 8.698 12.296 5.799 1.00 7.24 ? 4 ALA A CB 1 ATOM 40 N N . SER A 1 6 ? 8.278 13.422 2.559 1.00 6.28 ? 5 SER A N 1 ATOM 41 C CA . SER A 1 6 ? 8.193 13.000 1.123 1.00 6.18 ? 5 SER A CA 1 ATOM 42 C C . SER A 1 6 ? 6.836 13.094 0.622 1.00 7.01 ? 5 SER A C 1 ATOM 43 C CB . SER A 1 6 ? 8.785 11.586 0.940 1.00 7.09 ? 5 SER A CB 1 HETATM 44 N N . BB9 A 1 7 ? 6.205 14.155 0.198 1.00 6.05 ? 6 BB9 A N 1 HETATM 45 C CA . BB9 A 1 7 ? 4.901 13.936 -0.109 1.00 6.84 ? 6 BB9 A CA 1 HETATM 46 C C . BB9 A 1 7 ? 4.061 14.990 -0.577 1.00 6.56 ? 6 BB9 A C 1 HETATM 47 O O . BB9 A 1 7 ? 2.783 14.877 -0.613 1.00 7.90 ? 6 BB9 A O 1 HETATM 48 C CB . BB9 A 1 7 ? 4.484 12.601 0.180 1.00 10.84 ? 6 BB9 A CB 1 HETATM 49 S SG . BB9 A 1 7 ? 5.775 11.701 0.688 1.00 11.34 ? 6 BB9 A SG 1 ATOM 50 N N . THR A 1 8 ? 4.653 16.079 -1.038 1.00 6.01 ? 7 THR A N 1 ATOM 51 C CA . THR A 1 8 ? 3.936 17.243 -1.470 1.00 6.05 ? 7 THR A CA 1 ATOM 52 C C . THR A 1 8 ? 4.770 17.969 -2.493 1.00 5.82 ? 7 THR A C 1 ATOM 53 O O . THR A 1 8 ? 5.900 17.598 -2.771 1.00 7.98 ? 7 THR A O 1 ATOM 54 C CB . THR A 1 8 ? 3.608 18.094 -0.244 1.00 5.51 ? 7 THR A CB 1 ATOM 55 O OG1 . THR A 1 8 ? 2.539 19.005 -0.627 1.00 6.05 ? 7 THR A OG1 1 ATOM 56 C CG2 . THR A 1 8 ? 4.842 18.933 0.288 1.00 6.32 ? 7 THR A CG2 1 HETATM 57 N N . DBU A 1 9 ? 4.148 19.046 -3.025 1.00 6.75 ? 8 DBU A N 1 HETATM 58 C CA . DBU A 1 9 ? 4.786 19.889 -4.050 1.00 7.31 ? 8 DBU A CA 1 HETATM 59 C CB . DBU A 1 9 ? 5.190 19.455 -5.236 1.00 9.94 ? 8 DBU A CB 1 HETATM 60 C CG . DBU A 1 9 ? 5.119 17.992 -5.699 1.00 11.58 ? 8 DBU A CG 1 HETATM 61 C C . DBU A 1 9 ? 4.884 21.281 -3.727 1.00 7.55 ? 8 DBU A C 1 HETATM 62 N N . DCY A 1 10 ? 4.551 21.770 -2.577 1.00 7.33 ? 9 DCY A N 1 HETATM 63 C CA . DCY A 1 10 ? 4.548 23.238 -2.615 1.00 9.04 ? 9 DCY A CA 1 HETATM 64 C C . DCY A 1 10 ? 4.945 23.889 -1.309 1.00 9.07 ? 9 DCY A C 1 HETATM 65 O O . DCY A 1 10 ? 5.100 25.079 -1.296 1.00 17.74 ? 9 DCY A O 1 HETATM 66 C CB . DCY A 1 10 ? 5.446 23.716 -3.764 1.00 12.84 ? 9 DCY A CB 1 HETATM 67 S SG . DCY A 1 10 ? 5.325 22.401 -4.997 1.00 10.02 ? 9 DCY A SG 1 HETATM 68 N N . TS9 A 1 11 ? 4.955 23.127 -0.222 1.00 7.00 ? 10 TS9 A N 1 HETATM 69 C CA . TS9 A 1 11 ? 5.327 23.688 1.090 1.00 6.73 ? 10 TS9 A CA 1 HETATM 70 C C . TS9 A 1 11 ? 6.705 23.165 1.468 1.00 6.19 ? 10 TS9 A C 1 HETATM 71 C CB . TS9 A 1 11 ? 4.269 23.337 2.173 1.00 6.56 ? 10 TS9 A CB 1 HETATM 72 O OG3 . TS9 A 1 11 ? 3.991 21.946 2.127 1.00 6.17 ? 10 TS9 A OG3 1 HETATM 73 C CG2 . TS9 A 1 11 ? 4.766 23.744 3.523 1.00 7.92 ? 10 TS9 A CG2 1 HETATM 74 C CG1 . TS9 A 1 11 ? 2.931 24.042 1.809 1.00 9.05 ? 10 TS9 A CG1 1 HETATM 75 O OD2 . TS9 A 1 11 ? 3.225 25.458 1.751 1.00 14.73 ? 10 TS9 A OD2 1 HETATM 76 C CD1 . TS9 A 1 11 ? 1.767 23.757 2.766 1.00 10.37 ? 10 TS9 A CD1 1 HETATM 77 N N . BB9 A 1 12 ? 7.007 21.947 1.717 1.00 5.11 ? 11 BB9 A N 1 HETATM 78 C CA . BB9 A 1 12 ? 8.322 21.813 1.893 1.00 5.68 ? 11 BB9 A CA 1 HETATM 79 C C . BB9 A 1 12 ? 8.927 20.515 2.249 1.00 5.58 ? 11 BB9 A C 1 HETATM 80 O O . BB9 A 1 12 ? 10.162 20.353 2.304 1.00 6.68 ? 11 BB9 A O 1 HETATM 81 C CB . BB9 A 1 12 ? 9.106 22.991 1.786 1.00 7.26 ? 11 BB9 A CB 1 HETATM 82 S SG . BB9 A 1 12 ? 8.068 24.261 1.407 1.00 8.72 ? 11 BB9 A SG 1 ATOM 83 N N . THR A 1 13 ? 8.010 19.538 2.476 1.00 5.64 ? 12 THR A N 1 ATOM 84 C CA . THR A 1 13 ? 8.438 18.213 2.841 1.00 5.28 ? 12 THR A CA 1 ATOM 85 C C . THR A 1 13 ? 8.534 17.277 1.631 1.00 5.27 ? 12 THR A C 1 ATOM 86 C CB . THR A 1 13 ? 7.569 17.611 3.936 1.00 5.56 ? 12 THR A CB 1 ATOM 87 O OG1 . THR A 1 13 ? 6.149 17.695 3.521 1.00 5.14 ? 12 THR A OG1 1 ATOM 88 C CG2 . THR A 1 13 ? 7.663 18.414 5.254 1.00 6.10 ? 12 THR A CG2 1 HETATM 89 N N . BB9 A 1 14 ? 8.786 16.014 1.733 1.00 5.60 ? 13 BB9 A N 1 HETATM 90 C CA . BB9 A 1 14 ? 8.854 15.432 0.475 1.00 5.71 ? 13 BB9 A CA 1 HETATM 91 C C . BB9 A 1 14 ? 9.172 13.971 0.361 1.00 6.38 ? 13 BB9 A C 1 HETATM 92 C CB . BB9 A 1 14 ? 8.661 16.299 -0.544 1.00 5.90 ? 13 BB9 A CB 1 HETATM 93 S SG . BB9 A 1 14 ? 8.342 17.870 0.040 1.00 6.06 ? 13 BB9 A SG 1 HETATM 94 N N . MH6 A 1 15 ? 10.571 13.840 0.808 1.00 7.14 ? 14 MH6 A N 1 HETATM 95 C CA . MH6 A 1 15 ? 10.960 12.736 1.335 1.00 7.50 ? 14 MH6 A CA 1 HETATM 96 C C . MH6 A 1 15 ? 12.412 12.708 1.798 1.00 9.62 ? 14 MH6 A C 1 HETATM 97 C CB . MH6 A 1 15 ? 10.166 11.525 1.580 1.00 8.56 ? 14 MH6 A CB 1 HETATM 98 N N . BB9 A 1 16 ? 12.953 11.629 2.281 1.00 10.82 ? 15 BB9 A N 1 HETATM 99 C CA . BB9 A 1 16 ? 14.227 11.801 2.611 1.00 12.61 ? 15 BB9 A CA 1 HETATM 100 C C . BB9 A 1 16 ? 15.102 10.825 3.216 1.00 12.71 ? 15 BB9 A C 1 HETATM 101 O O . BB9 A 1 16 ? 16.104 10.920 3.583 1.00 15.83 ? 15 BB9 A O 1 HETATM 102 C CB . BB9 A 1 16 ? 14.747 13.175 2.250 1.00 14.30 ? 15 BB9 A CB 1 HETATM 103 S SG . BB9 A 1 16 ? 13.401 14.022 1.667 1.00 15.73 ? 15 BB9 A SG 1 HETATM 104 N N . DHA A 1 17 ? 14.395 9.649 3.363 1.00 12.87 ? 16 DHA A N 1 HETATM 105 C CA . DHA A 1 17 ? 14.879 8.253 3.824 1.00 14.69 ? 16 DHA A CA 1 HETATM 106 C CB . DHA A 1 17 ? 15.926 7.972 4.573 1.00 27.84 ? 16 DHA A CB 1 HETATM 107 C C . DHA A 1 17 ? 14.138 7.122 3.456 1.00 14.66 ? 16 DHA A C 1 HETATM 108 O O . DHA A 1 17 ? 13.306 7.397 2.630 1.00 13.98 ? 16 DHA A O 1 HETATM 109 N N . DHA A 1 18 ? 14.309 6.037 4.008 1.00 20.50 ? 17 DHA A N 1 HETATM 110 C CA . DHA A 1 18 ? 13.661 4.777 3.868 1.00 16.41 ? 17 DHA A CA 1 HETATM 111 C CB . DHA A 1 18 ? 12.553 4.655 3.163 1.00 16.54 ? 17 DHA A CB 1 HETATM 112 C C . DHA A 1 18 ? 14.479 3.622 4.272 0.50 11.76 ? 17 DHA A C 1 HETATM 113 O O . DHA A 1 18 ? 15.518 3.798 4.837 0.33 20.74 ? 17 DHA A O 1 HETATM 114 N N . NH2 A 1 19 ? 14.038 2.376 3.997 0.50 14.93 ? 18 NH2 A N 1 HETATM 115 O O . HOH B 2 . ? 5.469 21.108 6.859 0.50 8.65 ? 2001 HOH A O 1 HETATM 116 O O . HOH B 2 . ? 2.787 23.790 6.859 0.50 9.40 ? 2002 HOH A O 1 HETATM 117 O O . HOH B 2 . ? 8.885 15.358 8.419 1.00 23.36 ? 2003 HOH A O 1 HETATM 118 O O . HOH B 2 . ? 5.162 20.395 3.991 1.00 6.44 ? 2004 HOH A O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 1 O O12 . QUA A 1 ? 0.0992 0.0584 0.0587 0.0015 -0.0080 0.0018 0 QUA A O12 2 C C11 . QUA A 1 ? 0.0778 0.0640 0.0465 -0.0118 0.0000 0.0064 0 QUA A C11 3 C C2 . QUA A 1 ? 0.0783 0.0805 0.0468 -0.0079 0.0002 0.0030 0 QUA A C2 4 N N1 . QUA A 1 ? 0.0728 0.0689 0.0541 -0.0058 -0.0048 0.0017 0 QUA A N1 5 C C3 . QUA A 1 ? 0.0690 0.0859 0.0532 -0.0193 0.0036 -0.0001 0 QUA A C3 6 C C9 . QUA A 1 ? 0.0668 0.0949 0.0415 -0.0098 -0.0019 0.0006 0 QUA A C9 7 C C4 . QUA A 1 ? 0.0821 0.0929 0.0644 -0.0271 0.0031 -0.0072 0 QUA A C4 8 C C8 . QUA A 1 ? 0.0579 0.0960 0.0588 0.0011 0.0061 -0.0006 0 QUA A C8 9 C C10 . QUA A 1 ? 0.0686 0.0998 0.0480 -0.0210 0.0096 -0.0040 0 QUA A C10 10 O O16 . QUA A 1 ? 0.0744 0.0911 0.0521 0.0073 0.0006 -0.0024 0 QUA A O16 11 C C7 . QUA A 1 ? 0.0621 0.1375 0.0582 -0.0003 -0.0002 -0.0240 0 QUA A C7 12 C C13 . QUA A 1 ? 0.1004 0.1039 0.0846 -0.0480 0.0107 -0.0195 0 QUA A C13 13 O O15 . QUA A 1 ? 0.1607 0.1031 0.2069 -0.0534 0.0246 -0.0629 0 QUA A O15 14 C C5 . QUA A 1 ? 0.0666 0.1480 0.0554 -0.0131 0.0126 -0.0214 0 QUA A C5 15 C C14 . QUA A 1 ? 0.1523 0.2067 0.1193 -0.1019 0.0169 0.0186 0 QUA A C14 16 C C6 . QUA A 1 ? 0.0653 0.1414 0.0493 -0.0192 0.0022 -0.0054 0 QUA A C6 17 N N . ILE A 2 ? 0.0700 0.1007 0.0628 0.0057 0.0003 -0.0048 1 ILE A N 18 C CA . ILE A 2 ? 0.0726 0.1045 0.0642 0.0162 -0.0092 -0.0227 1 ILE A CA 19 C C . ILE A 2 ? 0.0700 0.0837 0.0692 0.0108 -0.0096 -0.0157 1 ILE A C 20 O O . ILE A 2 ? 0.0902 0.0834 0.1012 0.0209 -0.0283 -0.0241 1 ILE A O 21 C CB . ILE A 2 ? 0.0885 0.1034 0.1002 0.0178 0.0059 -0.0175 1 ILE A CB 22 C CG1 . ILE A 2 ? 0.1517 0.1315 0.1241 0.0015 0.0421 -0.0016 1 ILE A CG1 23 C CG2 . ILE A 2 ? 0.0618 0.1139 0.1524 0.0149 -0.0225 -0.0136 1 ILE A CG2 24 C CD1 . ILE A 2 ? 0.2837 0.3477 0.1339 -0.0097 0.0800 -0.0510 1 ILE A CD1 25 N N . ALA A 3 ? 0.0858 0.0913 0.0617 0.0175 -0.0091 -0.0161 2 ALA A N 26 C CA . ALA A 3 ? 0.1070 0.0794 0.0888 0.0351 -0.0303 -0.0289 2 ALA A CA 27 C C . ALA A 3 ? 0.0910 0.0778 0.0640 0.0002 0.0006 -0.0131 2 ALA A C 28 O O . ALA A 3 ? 0.0946 0.0917 0.0821 -0.0073 0.0007 -0.0230 2 ALA A O 29 C CB . ALA A 3 ? 0.1782 0.1138 0.0887 0.0706 -0.0528 -0.0370 2 ALA A CB 30 N N . DHA A 4 ? 0.1041 0.0633 0.0643 0.0200 -0.0012 -0.0123 3 DHA A N 31 C CA . DHA A 4 ? 0.1093 0.0630 0.0590 0.0088 0.0001 0.0083 3 DHA A CA 32 C CB . DHA A 4 ? 0.1266 0.0642 0.0629 -0.0112 -0.0123 0.0110 3 DHA A CB 33 C C . DHA A 4 ? 0.1032 0.0584 0.0507 0.0159 -0.0060 0.0041 3 DHA A C 34 O O . DHA A 4 ? 0.1037 0.0655 0.0740 0.0084 -0.0138 -0.0017 3 DHA A O 35 N N . ALA A 5 ? 0.1055 0.0620 0.0633 0.0064 0.0095 0.0032 4 ALA A N 36 C CA . ALA A 5 ? 0.1040 0.0768 0.0562 0.0171 0.0154 0.0049 4 ALA A CA 37 C C . ALA A 5 ? 0.1105 0.0692 0.0750 0.0080 0.0170 -0.0018 4 ALA A C 38 O O . ALA A 5 ? 0.1756 0.0632 0.0736 -0.0086 0.0242 -0.0067 4 ALA A O 39 C CB . ALA A 5 ? 0.1194 0.0804 0.0751 0.0205 0.0177 0.0069 4 ALA A CB 40 N N . SER A 6 ? 0.1125 0.0735 0.0524 0.0077 0.0073 -0.0050 5 SER A N 41 C CA . SER A 6 ? 0.1039 0.0740 0.0568 0.0059 0.0003 -0.0054 5 SER A CA 42 C C . SER A 6 ? 0.1048 0.0800 0.0816 -0.0151 -0.0087 0.0058 5 SER A C 43 C CB . SER A 6 ? 0.1291 0.0743 0.0661 0.0134 0.0052 -0.0177 5 SER A CB 44 N N . BB9 A 7 ? 0.0943 0.0811 0.0546 -0.0072 0.0077 -0.0094 6 BB9 A N 45 C CA . BB9 A 7 ? 0.0945 0.0947 0.0708 -0.0133 -0.0019 0.0034 6 BB9 A CA 46 C C . BB9 A 7 ? 0.0765 0.1115 0.0611 -0.0183 0.0102 0.0026 6 BB9 A C 47 O O . BB9 A 7 ? 0.0814 0.1218 0.0969 -0.0215 -0.0013 -0.0126 6 BB9 A O 48 C CB . BB9 A 7 ? 0.1308 0.0944 0.1865 -0.0297 -0.0398 0.0042 6 BB9 A CB 49 S SG . BB9 A 7 ? 0.1360 0.0881 0.2067 -0.0322 -0.0208 0.0320 6 BB9 A SG 50 N N . THR A 8 ? 0.0844 0.0853 0.0588 -0.0020 0.0014 -0.0100 7 THR A N 51 C CA . THR A 8 ? 0.0766 0.0942 0.0592 -0.0023 0.0039 0.0006 7 THR A CA 52 C C . THR A 8 ? 0.0666 0.1072 0.0473 0.0034 -0.0053 -0.0037 7 THR A C 53 O O . THR A 8 ? 0.0986 0.1258 0.0788 0.0230 0.0115 0.0181 7 THR A O 54 C CB . THR A 8 ? 0.0560 0.0995 0.0538 0.0072 -0.0084 -0.0003 7 THR A CB 55 O OG1 . THR A 8 ? 0.0642 0.0988 0.0670 0.0015 -0.0088 -0.0006 7 THR A OG1 56 C CG2 . THR A 8 ? 0.0634 0.1066 0.0702 -0.0045 -0.0041 -0.0071 7 THR A CG2 57 N N . DBU A 9 ? 0.0712 0.1274 0.0578 -0.0002 -0.0107 0.0103 8 DBU A N 58 C CA . DBU A 9 ? 0.0755 0.1345 0.0679 0.0080 0.0003 0.0173 8 DBU A CA 59 C CB . DBU A 9 ? 0.1245 0.1787 0.0745 0.0431 0.0243 0.0269 8 DBU A CB 60 C CG . DBU A 9 ? 0.1828 0.1936 0.0637 0.0430 0.0222 -0.0102 8 DBU A CG 61 C C . DBU A 9 ? 0.0725 0.1418 0.0726 0.0085 -0.0159 0.0306 8 DBU A C 62 N N . DCY A 10 ? 0.0818 0.1235 0.0732 -0.0129 -0.0160 0.0221 9 DCY A N 63 C CA . DCY A 10 ? 0.1145 0.1272 0.1017 -0.0138 -0.0297 0.0244 9 DCY A CA 64 C C . DCY A 10 ? 0.1483 0.0897 0.1067 0.0051 -0.0058 0.0217 9 DCY A C 65 O O . DCY A 10 ? 0.4223 0.1258 0.1258 -0.0856 -0.0667 0.0487 9 DCY A O 66 C CB . DCY A 10 ? 0.2284 0.1642 0.0951 -0.0437 -0.0141 0.0620 9 DCY A CB 67 S SG . DCY A 10 ? 0.1127 0.1744 0.0938 -0.0118 -0.0006 0.0539 9 DCY A SG 68 N N . TS9 A 11 ? 0.0915 0.0914 0.0833 -0.0147 -0.0217 0.0101 10 TS9 A N 69 C CA . TS9 A 11 ? 0.0808 0.0773 0.0975 -0.0022 -0.0215 0.0042 10 TS9 A CA 70 C C . TS9 A 11 ? 0.0795 0.0749 0.0809 -0.0022 -0.0173 -0.0005 10 TS9 A C 71 C CB . TS9 A 11 ? 0.0770 0.0743 0.0978 0.0076 -0.0198 -0.0150 10 TS9 A CB 72 O OG3 . TS9 A 11 ? 0.0688 0.0780 0.0878 0.0026 -0.0141 -0.0063 10 TS9 A OG3 73 C CG2 . TS9 A 11 ? 0.0974 0.0951 0.1082 0.0058 -0.0200 -0.0213 10 TS9 A CG2 74 C CG1 . TS9 A 11 ? 0.0774 0.0953 0.1712 0.0157 -0.0256 -0.0107 10 TS9 A CG1 75 O OD2 . TS9 A 11 ? 0.1323 0.0863 0.3411 0.0327 -0.0035 0.0415 10 TS9 A OD2 76 C CD1 . TS9 A 11 ? 0.0764 0.1475 0.1702 0.0013 -0.0214 -0.0284 10 TS9 A CD1 77 N N . BB9 A 12 ? 0.0631 0.0594 0.0716 -0.0131 -0.0092 0.0049 11 BB9 A N 78 C CA . BB9 A 12 ? 0.0614 0.0804 0.0740 -0.0037 -0.0074 -0.0012 11 BB9 A CA 79 C C . BB9 A 12 ? 0.0651 0.0763 0.0706 -0.0068 -0.0090 0.0058 11 BB9 A C 80 O O . BB9 A 12 ? 0.0632 0.0825 0.1081 -0.0055 -0.0181 0.0053 11 BB9 A O 81 C CB . BB9 A 12 ? 0.0886 0.0820 0.1052 -0.0275 -0.0168 0.0135 11 BB9 A CB 82 S SG . BB9 A 12 ? 0.0977 0.0783 0.1554 -0.0244 -0.0310 0.0222 11 BB9 A SG 83 N N . THR A 13 ? 0.0733 0.0700 0.0710 -0.0063 -0.0051 0.0032 12 THR A N 84 C CA . THR A 13 ? 0.0546 0.0696 0.0763 0.0044 -0.0091 0.0058 12 THR A CA 85 C C . THR A 13 ? 0.0518 0.0745 0.0740 -0.0053 -0.0069 0.0047 12 THR A C 86 C CB . THR A 13 ? 0.0733 0.0718 0.0663 -0.0129 -0.0164 -0.0007 12 THR A CB 87 O OG1 . THR A 13 ? 0.0679 0.0649 0.0625 -0.0017 -0.0130 0.0009 12 THR A OG1 88 C CG2 . THR A 13 ? 0.0832 0.0817 0.0671 -0.0064 -0.0140 -0.0061 12 THR A CG2 89 N N . BB9 A 14 ? 0.0712 0.0745 0.0672 -0.0066 -0.0056 0.0037 13 BB9 A N 90 C CA . BB9 A 14 ? 0.0707 0.0830 0.0634 -0.0058 -0.0018 0.0005 13 BB9 A CA 91 C C . BB9 A 14 ? 0.0933 0.0921 0.0569 0.0003 0.0050 -0.0002 13 BB9 A C 92 C CB . BB9 A 14 ? 0.0679 0.0916 0.0646 -0.0076 0.0031 0.0051 13 BB9 A CB 93 S SG . BB9 A 14 ? 0.0649 0.0890 0.0763 -0.0058 -0.0046 0.0149 13 BB9 A SG 94 N N . MH6 A 15 ? 0.0950 0.1049 0.0714 0.0116 0.0029 -0.0164 14 MH6 A N 95 C CA . MH6 A 15 ? 0.1093 0.1033 0.0724 0.0293 -0.0016 -0.0299 14 MH6 A CA 96 C C . MH6 A 15 ? 0.1205 0.1236 0.1216 0.0582 -0.0100 -0.0469 14 MH6 A C 97 C CB . MH6 A 15 ? 0.1475 0.0835 0.0942 0.0328 -0.0055 -0.0210 14 MH6 A CB 98 N N . BB9 A 16 ? 0.1425 0.1638 0.1049 0.0872 -0.0208 -0.0569 15 BB9 A N 99 C CA . BB9 A 16 ? 0.1480 0.1882 0.1428 0.0723 -0.0459 -0.0545 15 BB9 A CA 100 C C . BB9 A 16 ? 0.1433 0.1787 0.1607 0.0787 -0.0641 -0.0838 15 BB9 A C 101 O O . BB9 A 16 ? 0.1750 0.2027 0.2237 0.0739 -0.0990 -0.0463 15 BB9 A O 102 C CB . BB9 A 16 ? 0.1408 0.1738 0.2289 0.0698 -0.0535 -0.0821 15 BB9 A CB 103 S SG . BB9 A 16 ? 0.1381 0.1347 0.3248 0.0420 -0.0954 -0.0939 15 BB9 A SG 104 N N . DHA A 17 ? 0.1710 0.1787 0.1393 0.0868 -0.0192 -0.0524 16 DHA A N 105 C CA . DHA A 17 ? 0.2303 0.1928 0.1349 0.1047 -0.0162 -0.0356 16 DHA A CA 106 C CB . DHA A 17 ? 0.5048 0.2518 0.3013 0.2254 -0.2723 -0.1557 16 DHA A CB 107 C C . DHA A 17 ? 0.1976 0.1720 0.1874 0.1059 0.0349 -0.0096 16 DHA A C 108 O O . DHA A 17 ? 0.1815 0.1928 0.1568 0.0492 0.0379 -0.0086 16 DHA A O 109 N N . DHA A 18 ? 0.2618 0.1889 0.3283 0.0818 -0.0472 0.0362 17 DHA A N 110 C CA . DHA A 18 ? 0.2484 0.2044 0.1708 0.0558 0.0048 0.0246 17 DHA A CA 111 C CB . DHA A 18 ? 0.1873 0.2354 0.2059 0.0745 0.0378 0.0342 17 DHA A CB 112 C C . DHA A 18 ? 0.1489 0.1582 0.1395 -0.0378 0.0032 0.0506 17 DHA A C 113 O O . DHA A 18 ? 0.3530 0.0713 0.3638 -0.0453 -0.2207 0.0398 17 DHA A O 114 N N . NH2 A 19 ? 0.1540 0.1735 0.2396 -0.0197 -0.0706 -0.0012 18 NH2 A N 115 O O . HOH B . ? 0.0973 0.0973 0.1340 0.0427 -0.0498 -0.0498 2001 HOH A O 116 O O . HOH B . ? 0.0960 0.0960 0.1650 0.0186 -0.0323 -0.0323 2002 HOH A O 117 O O . HOH B . ? 0.3236 0.1353 0.4288 -0.0632 -0.0207 -0.0648 2003 HOH A O 118 O O . HOH B . ? 0.0741 0.0770 0.0936 0.0097 -0.0155 0.0058 2004 HOH A O #
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