Acta Crystallographica Section D
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STRUCTURAL BIOLOGY
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STRUCTURAL
BIOLOGY
Volume 60
|
Part 5
|
May 2004
|
Pages 823–828
https://doi.org/10.1107/S0907444904003907
Open
access
ISSN: 2059-7983
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STRUCTURAL
BIOLOGY
Volume 60
|
Part 5
|
May 2004
|
Pages 823–828
https://doi.org/10.1107/S0907444904003907
Open
access
ISSN: 2059-7983
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data_1RQY # _entry.id 1RQY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RQY pdb_00001rqy 10.2210/pdb1rqy/pdb NDB DD0062 ? ? RCSB RCSB020972 ? ? WWPDB D_1000020972 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1FN1 'Crystal Structure Of 9-Amino-(N-(2-Dimethylamino)Butyl) Acridine-4-Carboxamide Bound To D(Cg(5Br)Uacg)2' unspecified PDB 1FN2 '9-Amino-(N-(2-Dimethylamino)Butyl)Acridine-4-Carboxamide Bound To D(Cgtacg)2' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RQY _pdbx_database_status.recvd_initial_deposition_date 2003-12-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Adams, A.' 1 'Guss, J.M.' 2 'Denny, W.A.' 3 'Wakelin, L.P.' 4 # _citation.id primary _citation.title ;Structure of 9-amino-[N-(2-dimethylamino)propyl]acridine-4-carboxamide bound to d(CGTACG)(2): a comparison of structures of d(CGTACG)(2) complexed with intercalatorsin the presence of cobalt. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 60 _citation.page_first 823 _citation.page_last 828 _citation.year 2004 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15103127 _citation.pdbx_database_id_DOI 10.1107/S0907444904003907 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Adams, A.' 1 ? primary 'Guss, J.M.' 2 ? primary 'Denny, W.A.' 3 ? primary 'Wakelin, L.P.' 4 ? # _cell.entry_id 1RQY _cell.length_a 28.745 _cell.length_b 52.124 _cell.length_c 40.745 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RQY _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(CP*GP*TP*AP*CP*G)-3'" 1809.217 2 ? ? ? ? 2 non-polymer syn 'COBALT (II) ION' 58.933 2 ? ? ? ? 3 non-polymer syn '9-AMINO-N-[3-(DIMETHYLAMINO)PROPYL]ACRIDINE-4-CARBOXAMIDE' 322.404 3 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 30 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DA)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGTACG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DC n 1 6 DG n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1RQY _struct_ref.pdbx_db_accession 1RQY _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RQY A 1 ? 6 ? 1RQY 0 ? 5 ? 0 5 2 1 1RQY B 1 ? 6 ? 1RQY 1 ? 6 ? 1 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 7AD non-polymer . '9-AMINO-N-[3-(DIMETHYLAMINO)PROPYL]ACRIDINE-4-CARBOXAMIDE' ? 'C19 H22 N4 O' 322.404 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # _exptl.entry_id 1RQY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 37.91 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.00 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 285 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'sodium cacodylate, magnesium acetate, cobalt chloride, spermine, MPD, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 285K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'sodium cacodylate' ? ? ? 1 2 1 'magnesium acetate' ? ? ? 1 3 1 'cobalt chloride' ? ? ? 1 4 1 spermine ? ? ? 1 5 1 MPD ? ? ? 1 6 1 H2O ? ? ? 1 7 2 'sodium cacodylate' ? ? ? 1 8 2 'magnesium acetate' ? ? ? 1 9 2 'cobalt chloride' ? ? ? 1 10 2 MPD ? ? ? 1 11 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1998-03-18 _diffrn_detector.details 'focusing mirror optics' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Osmic mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1RQY _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40 _reflns.d_resolution_high 1.55 _reflns.number_obs 4786 _reflns.number_all 4786 _reflns.percent_possible_obs 97.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.077 _reflns.pdbx_netI_over_sigmaI 12.0 _reflns.B_iso_Wilson_estimate 20.6 _reflns.pdbx_redundancy 9.8 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 81.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.26 _reflns_shell.meanI_over_sigI_obs 3.8 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 383 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RQY _refine.ls_number_reflns_obs 4670 _refine.ls_number_reflns_all 4608 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.00 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 95.5 _refine.ls_R_factor_obs 0.229 _refine.ls_R_factor_all 0.229 _refine.ls_R_factor_R_work 0.2265 _refine.ls_R_factor_R_free 0.2863 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.9 _refine.ls_number_reflns_R_free 362 _refine.ls_number_parameters 1235 _refine.ls_number_restraints 2833 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details 'ANISOTROPIC SCALING APPLIED BY THE METHOD OF PARKIN, MOEZZI & HOPE, J.APPL.CRYST.28(1995)53-56' _refine.pdbx_starting_model 'PDB entry 1FN1' _refine.pdbx_method_to_determine_struct refinement _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1RQY _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 3 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 269.25 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 224 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 303 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 40.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.030 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0094 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.008 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.009 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.088 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.6 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.337 _refine_ls_shell.percent_reflns_obs 82 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _pdbx_refine.entry_id 1RQY _pdbx_refine.R_factor_all_no_cutoff 0.229 _pdbx_refine.R_factor_obs_no_cutoff 0.2265 _pdbx_refine.free_R_factor_no_cutoff 0.2863 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 7.9 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 362 _pdbx_refine.R_factor_all_4sig_cutoff 0.2218 _pdbx_refine.R_factor_obs_4sig_cutoff 0.2193 _pdbx_refine.free_R_factor_4sig_cutoff 0.2763 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 7.8 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 324 _pdbx_refine.number_reflns_obs_4sig_cutoff 4147 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1RQY _struct.title '9-amino-[N-(2-dimethylamino)proply]-acridine-4-carboxamide bound to d(CGTACG)2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RQY _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'B-DNA, cytosine exchange, quadruplex, acridine, unusual intercalation, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 2 ? G N N 4 ? H N N 4 ? I N N 3 ? J N N 5 ? K N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 2 N7 ? ? ? 1_555 C CO . CO ? ? A DG 1 A CO 902 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc2 metalc ? ? C CO . CO ? ? ? 1_555 J HOH . O ? ? A CO 902 A HOH 909 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc3 metalc ? ? C CO . CO ? ? ? 1_555 J HOH . O ? ? A CO 902 A HOH 920 1_555 ? ? ? ? ? ? ? 2.129 ? ? metalc4 metalc ? ? C CO . CO ? ? ? 1_555 J HOH . O ? ? A CO 902 A HOH 921 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc5 metalc ? ? C CO . CO ? ? ? 1_555 J HOH . O ? ? A CO 902 A HOH 922 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc6 metalc ? ? C CO . CO ? ? ? 1_555 J HOH . O ? ? A CO 902 A HOH 923 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc7 metalc ? ? B DG 2 OP2 ? ? ? 1_555 G MG . MG ? ? B DG 2 B MG 903 1_555 ? ? ? ? ? ? ? 1.737 ? ? metalc8 metalc ? ? B DG 2 OP2 ? ? ? 2_665 G MG . MG ? ? B DG 2 B MG 903 1_555 ? ? ? ? ? ? ? 2.711 ? ? metalc9 metalc ? ? B DG 2 OP2 ? ? ? 4_565 G MG . MG ? ? B DG 2 B MG 903 1_555 ? ? ? ? ? ? ? 1.737 ? ? metalc10 metalc ? ? B DG 2 OP2 ? ? ? 3_655 G MG . MG ? ? B DG 2 B MG 903 1_555 ? ? ? ? ? ? ? 2.711 ? ? metalc11 metalc ? ? B DG 6 N7 ? ? ? 1_555 F CO . CO ? ? B DG 6 B CO 901 1_555 ? ? ? ? ? ? ? 2.123 ? ? metalc12 metalc ? ? B DG 6 N7 ? ? ? 3_756 F CO . CO ? ? B DG 6 B CO 901 1_555 ? ? ? ? ? ? ? 2.122 ? ? metalc13 metalc ? ? B DG 6 OP1 ? ? ? 1_555 H MG . MG ? ? B DG 6 B MG 904 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc14 metalc ? ? B DG 6 OP1 ? ? ? 6_655 H MG . MG ? ? B DG 6 B MG 904 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc15 metalc ? ? F CO . CO ? ? ? 1_555 K HOH . O ? ? B CO 901 B HOH 911 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc16 metalc ? ? F CO . CO ? ? ? 1_555 K HOH . O ? ? B CO 901 B HOH 911 3_756 ? ? ? ? ? ? ? 2.269 ? ? metalc17 metalc ? ? F CO . CO ? ? ? 1_555 K HOH . O ? ? B CO 901 B HOH 915 1_555 ? ? ? ? ? ? ? 1.928 ? ? metalc18 metalc ? ? F CO . CO ? ? ? 1_555 K HOH . O ? ? B CO 901 B HOH 915 3_756 ? ? ? ? ? ? ? 1.927 ? ? metalc19 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 903 B HOH 926 1_555 ? ? ? ? ? ? ? 2.217 ? ? metalc20 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 903 B HOH 926 3_655 ? ? ? ? ? ? ? 2.217 ? ? metalc21 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 903 B HOH 926 4_565 ? ? ? ? ? ? ? 2.217 ? ? metalc22 metalc ? ? G MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 903 B HOH 926 2_665 ? ? ? ? ? ? ? 2.217 ? ? metalc23 metalc ? ? H MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 904 B HOH 4036 3_756 ? ? ? ? ? ? ? 3.148 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 1 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 1 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 1 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 2 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 2 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 3 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 3 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 4 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 4 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 4 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CO 901 ? 3 'BINDING SITE FOR RESIDUE CO B 901' AC2 Software A CO 902 ? 6 'BINDING SITE FOR RESIDUE CO A 902' AC3 Software B MG 903 ? 2 'BINDING SITE FOR RESIDUE MG B 903' AC4 Software B MG 904 ? 2 'BINDING SITE FOR RESIDUE MG B 904' AC5 Software A 7AD 101 ? 4 'BINDING SITE FOR RESIDUE 7AD A 101' AC6 Software B 7AD 401 ? 5 'BINDING SITE FOR RESIDUE 7AD B 401' AC7 Software A 7AD 601 ? 4 'BINDING SITE FOR RESIDUE 7AD A 601' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 DG B 6 ? DG B 6 . ? 1_555 ? 2 AC1 3 HOH K . ? HOH B 911 . ? 1_555 ? 3 AC1 3 HOH K . ? HOH B 915 . ? 3_756 ? 4 AC2 6 DG A 2 ? DG A 1 . ? 1_555 ? 5 AC2 6 HOH J . ? HOH A 909 . ? 1_555 ? 6 AC2 6 HOH J . ? HOH A 920 . ? 1_555 ? 7 AC2 6 HOH J . ? HOH A 921 . ? 1_555 ? 8 AC2 6 HOH J . ? HOH A 922 . ? 1_555 ? 9 AC2 6 HOH J . ? HOH A 923 . ? 1_555 ? 10 AC3 2 DG B 2 ? DG B 2 . ? 3_655 ? 11 AC3 2 HOH K . ? HOH B 926 . ? 1_555 ? 12 AC4 2 DC B 5 ? DC B 5 . ? 6_655 ? 13 AC4 2 DG B 6 ? DG B 6 . ? 1_555 ? 14 AC5 4 DC A 5 ? DC A 4 . ? 1_555 ? 15 AC5 4 DG A 6 ? DG A 5 . ? 1_555 ? 16 AC5 4 DC B 1 ? DC B 1 . ? 3_655 ? 17 AC5 4 DG B 2 ? DG B 2 . ? 1_555 ? 18 AC6 5 DC A 5 ? DC A 4 . ? 1_555 ? 19 AC6 5 DG A 6 ? DG A 5 . ? 1_555 ? 20 AC6 5 DC B 1 ? DC B 1 . ? 4_565 ? 21 AC6 5 DG B 2 ? DG B 2 . ? 2_665 ? 22 AC6 5 HOH K . ? HOH B 926 . ? 2_665 ? 23 AC7 4 DC A 5 ? DC A 4 . ? 1_555 ? 24 AC7 4 DG A 6 ? DG A 5 . ? 1_555 ? 25 AC7 4 DC B 1 ? DC B 1 . ? 3_655 ? 26 AC7 4 DG B 2 ? DG B 2 . ? 1_555 ? # _database_PDB_matrix.entry_id 1RQY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 1RQY _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.034789 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019185 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024543 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CO MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 P P . DG A 1 2 ? 15.146 8.151 5.396 1.00 31.38 ? 1 DG A P 1 ATOM 2 O OP1 . DG A 1 2 ? 16.587 7.885 5.360 1.00 26.19 ? 1 DG A OP1 1 ATOM 3 O OP2 . DG A 1 2 ? 14.525 9.380 4.908 1.00 34.61 ? 1 DG A OP2 1 ATOM 4 O "O5'" . DG A 1 2 ? 14.791 8.145 6.960 1.00 31.77 ? 1 DG A "O5'" 1 ATOM 5 C "C5'" . DG A 1 2 ? 15.066 7.072 7.885 1.00 23.93 ? 1 DG A "C5'" 1 ATOM 6 C "C4'" . DG A 1 2 ? 14.679 7.553 9.272 1.00 22.44 ? 1 DG A "C4'" 1 ATOM 7 O "O4'" . DG A 1 2 ? 15.751 8.441 9.753 1.00 20.04 ? 1 DG A "O4'" 1 ATOM 8 C "C3'" . DG A 1 2 ? 13.421 8.375 9.449 1.00 17.36 ? 1 DG A "C3'" 1 ATOM 9 O "O3'" . DG A 1 2 ? 12.926 8.035 10.739 1.00 23.24 ? 1 DG A "O3'" 1 ATOM 10 C "C2'" . DG A 1 2 ? 13.857 9.831 9.243 1.00 16.53 ? 1 DG A "C2'" 1 ATOM 11 C "C1'" . DG A 1 2 ? 15.217 9.774 9.925 1.00 13.67 ? 1 DG A "C1'" 1 ATOM 12 N N9 . DG A 1 2 ? 16.250 10.604 9.360 1.00 13.46 ? 1 DG A N9 1 ATOM 13 C C8 . DG A 1 2 ? 16.571 10.686 8.008 1.00 15.18 ? 1 DG A C8 1 ATOM 14 N N7 . DG A 1 2 ? 17.533 11.503 7.790 1.00 14.99 ? 1 DG A N7 1 ATOM 15 C C5 . DG A 1 2 ? 17.889 12.005 9.033 1.00 14.40 ? 1 DG A C5 1 ATOM 16 C C6 . DG A 1 2 ? 18.888 12.943 9.403 1.00 15.02 ? 1 DG A C6 1 ATOM 17 O O6 . DG A 1 2 ? 19.663 13.511 8.609 1.00 12.86 ? 1 DG A O6 1 ATOM 18 N N1 . DG A 1 2 ? 18.928 13.185 10.783 1.00 10.42 ? 1 DG A N1 1 ATOM 19 C C2 . DG A 1 2 ? 18.085 12.573 11.673 1.00 10.83 ? 1 DG A C2 1 ATOM 20 N N2 . DG A 1 2 ? 18.191 12.863 12.988 1.00 7.99 ? 1 DG A N2 1 ATOM 21 N N3 . DG A 1 2 ? 17.151 11.697 11.338 1.00 12.48 ? 1 DG A N3 1 ATOM 22 C C4 . DG A 1 2 ? 17.096 11.451 10.019 1.00 10.13 ? 1 DG A C4 1 ATOM 23 P P . DT A 1 3 ? 11.417 8.430 11.150 1.00 24.41 ? 2 DT A P 1 ATOM 24 O OP1 . DT A 1 3 ? 11.017 7.493 12.148 1.00 22.16 ? 2 DT A OP1 1 ATOM 25 O OP2 . DT A 1 3 ? 10.723 8.824 9.933 1.00 25.91 ? 2 DT A OP2 1 ATOM 26 O "O5'" . DT A 1 3 ? 11.712 9.815 11.913 1.00 19.89 ? 2 DT A "O5'" 1 ATOM 27 C "C5'" . DT A 1 3 ? 12.643 9.808 13.035 1.00 18.49 ? 2 DT A "C5'" 1 ATOM 28 C "C4'" . DT A 1 3 ? 12.831 11.266 13.403 1.00 16.18 ? 2 DT A "C4'" 1 ATOM 29 O "O4'" . DT A 1 3 ? 13.763 11.867 12.440 1.00 14.91 ? 2 DT A "O4'" 1 ATOM 30 C "C3'" . DT A 1 3 ? 11.612 12.169 13.367 1.00 13.33 ? 2 DT A "C3'" 1 ATOM 31 O "O3'" . DT A 1 3 ? 11.271 12.440 14.732 1.00 17.54 ? 2 DT A "O3'" 1 ATOM 32 C "C2'" . DT A 1 3 ? 11.971 13.401 12.511 1.00 14.98 ? 2 DT A "C2'" 1 ATOM 33 C "C1'" . DT A 1 3 ? 13.490 13.300 12.457 1.00 15.02 ? 2 DT A "C1'" 1 ATOM 34 N N1 . DT A 1 3 ? 14.262 13.759 11.295 1.00 11.12 ? 2 DT A N1 1 ATOM 35 C C2 . DT A 1 3 ? 15.307 14.604 11.551 1.00 15.10 ? 2 DT A C2 1 ATOM 36 O O2 . DT A 1 3 ? 15.582 14.964 12.694 1.00 14.21 ? 2 DT A O2 1 ATOM 37 N N3 . DT A 1 3 ? 16.012 15.022 10.444 1.00 13.00 ? 2 DT A N3 1 ATOM 38 C C4 . DT A 1 3 ? 15.732 14.634 9.134 1.00 12.50 ? 2 DT A C4 1 ATOM 39 O O4 . DT A 1 3 ? 16.454 15.089 8.252 1.00 15.58 ? 2 DT A O4 1 ATOM 40 C C5 . DT A 1 3 ? 14.617 13.742 8.947 1.00 14.83 ? 2 DT A C5 1 ATOM 41 C C7 . DT A 1 3 ? 14.226 13.265 7.579 1.00 26.58 ? 2 DT A C7 1 ATOM 42 C C6 . DT A 1 3 ? 13.939 13.349 10.030 1.00 12.56 ? 2 DT A C6 1 ATOM 43 P P . DA A 1 4 ? 10.292 13.515 15.379 1.00 19.24 ? 3 DA A P 1 ATOM 44 O OP1 . DA A 1 4 ? 9.999 13.123 16.745 1.00 22.47 ? 3 DA A OP1 1 ATOM 45 O OP2 . DA A 1 4 ? 9.300 13.913 14.365 1.00 19.88 ? 3 DA A OP2 1 ATOM 46 O "O5'" . DA A 1 4 ? 11.229 14.804 15.458 1.00 20.00 ? 3 DA A "O5'" 1 ATOM 47 C "C5'" . DA A 1 4 ? 12.357 14.758 16.385 1.00 23.30 ? 3 DA A "C5'" 1 ATOM 48 C "C4'" . DA A 1 4 ? 12.822 16.203 16.489 1.00 20.21 ? 3 DA A "C4'" 1 ATOM 49 O "O4'" . DA A 1 4 ? 13.611 16.429 15.271 1.00 19.66 ? 3 DA A "O4'" 1 ATOM 50 C "C3'" . DA A 1 4 ? 11.789 17.300 16.544 1.00 14.22 ? 3 DA A "C3'" 1 ATOM 51 O "O3'" . DA A 1 4 ? 12.144 18.182 17.594 1.00 18.71 ? 3 DA A "O3'" 1 ATOM 52 C "C2'" . DA A 1 4 ? 11.780 17.949 15.135 1.00 11.86 ? 3 DA A "C2'" 1 ATOM 53 C "C1'" . DA A 1 4 ? 13.225 17.704 14.688 1.00 19.52 ? 3 DA A "C1'" 1 ATOM 54 N N9 . DA A 1 4 ? 13.474 17.575 13.266 1.00 14.11 ? 3 DA A N9 1 ATOM 55 C C8 . DA A 1 4 ? 12.800 16.821 12.347 1.00 17.19 ? 3 DA A C8 1 ATOM 56 N N7 . DA A 1 4 ? 13.263 16.907 11.116 1.00 16.12 ? 3 DA A N7 1 ATOM 57 C C5 . DA A 1 4 ? 14.322 17.786 11.243 1.00 14.60 ? 3 DA A C5 1 ATOM 58 C C6 . DA A 1 4 ? 15.227 18.297 10.284 1.00 9.48 ? 3 DA A C6 1 ATOM 59 N N6 . DA A 1 4 ? 15.118 17.908 8.997 1.00 17.97 ? 3 DA A N6 1 ATOM 60 N N1 . DA A 1 4 ? 16.184 19.156 10.680 1.00 13.19 ? 3 DA A N1 1 ATOM 61 C C2 . DA A 1 4 ? 16.217 19.485 11.987 1.00 17.20 ? 3 DA A C2 1 ATOM 62 N N3 . DA A 1 4 ? 15.418 19.070 12.973 1.00 14.77 ? 3 DA A N3 1 ATOM 63 C C4 . DA A 1 4 ? 14.477 18.215 12.555 1.00 9.81 ? 3 DA A C4 1 ATOM 64 P P . DC A 1 5 ? 11.119 19.377 18.013 1.00 35.01 ? 4 DC A P 1 ATOM 65 O OP1 . DC A 1 5 ? 11.466 19.730 19.374 1.00 32.50 ? 4 DC A OP1 1 ATOM 66 O OP2 . DC A 1 5 ? 9.839 19.058 17.442 1.00 28.48 ? 4 DC A OP2 1 ATOM 67 O "O5'" . DC A 1 5 ? 11.713 20.547 17.102 1.00 19.14 ? 4 DC A "O5'" 1 ATOM 68 C "C5'" . DC A 1 5 ? 13.119 20.924 17.286 1.00 20.16 ? 4 DC A "C5'" 1 ATOM 69 C "C4'" . DC A 1 5 ? 13.267 21.990 16.210 1.00 18.12 ? 4 DC A "C4'" 1 ATOM 70 O "O4'" . DC A 1 5 ? 13.336 21.257 14.934 1.00 22.39 ? 4 DC A "O4'" 1 ATOM 71 C "C3'" . DC A 1 5 ? 12.169 23.018 16.077 1.00 19.17 ? 4 DC A "C3'" 1 ATOM 72 O "O3'" . DC A 1 5 ? 12.724 24.314 16.333 1.00 40.91 ? 4 DC A "O3'" 1 ATOM 73 C "C2'" . DC A 1 5 ? 11.604 22.820 14.663 1.00 25.31 ? 4 DC A "C2'" 1 ATOM 74 C "C1'" . DC A 1 5 ? 12.810 22.169 13.949 1.00 30.03 ? 4 DC A "C1'" 1 ATOM 75 N N1 . DC A 1 5 ? 12.547 21.429 12.711 1.00 14.80 ? 4 DC A N1 1 ATOM 76 C C2 . DC A 1 5 ? 13.437 21.663 11.657 1.00 13.59 ? 4 DC A C2 1 ATOM 77 O O2 . DC A 1 5 ? 14.380 22.448 11.799 1.00 18.83 ? 4 DC A O2 1 ATOM 78 N N3 . DC A 1 5 ? 13.242 21.003 10.476 1.00 23.08 ? 4 DC A N3 1 ATOM 79 C C4 . DC A 1 5 ? 12.219 20.158 10.340 1.00 18.05 ? 4 DC A C4 1 ATOM 80 N N4 . DC A 1 5 ? 12.064 19.536 9.175 1.00 17.75 ? 4 DC A N4 1 ATOM 81 C C5 . DC A 1 5 ? 11.302 19.910 11.411 1.00 17.38 ? 4 DC A C5 1 ATOM 82 C C6 . DC A 1 5 ? 11.512 20.573 12.565 1.00 14.04 ? 4 DC A C6 1 ATOM 83 P P . DG A 1 6 ? 11.695 25.513 16.692 1.00 36.78 ? 5 DG A P 1 ATOM 84 O OP1 . DG A 1 6 ? 12.343 26.322 17.704 1.00 81.82 ? 5 DG A OP1 1 ATOM 85 O OP2 . DG A 1 6 ? 10.363 24.977 16.667 1.00 25.93 ? 5 DG A OP2 1 ATOM 86 O "O5'" . DG A 1 6 ? 11.811 26.370 15.346 1.00 37.67 ? 5 DG A "O5'" 1 ATOM 87 C "C5'" . DG A 1 6 ? 12.990 27.095 14.873 1.00 21.57 ? 5 DG A "C5'" 1 ATOM 88 C "C4'" . DG A 1 6 ? 12.379 28.333 14.238 1.00 25.20 ? 5 DG A "C4'" 1 ATOM 89 O "O4'" . DG A 1 6 ? 11.844 27.944 12.918 1.00 25.11 ? 5 DG A "O4'" 1 ATOM 90 C "C3'" . DG A 1 6 ? 11.207 29.009 14.911 1.00 17.26 ? 5 DG A "C3'" 1 ATOM 91 O "O3'" . DG A 1 6 ? 11.679 29.805 15.983 1.00 22.29 ? 5 DG A "O3'" 1 ATOM 92 C "C2'" . DG A 1 6 ? 10.545 29.773 13.745 1.00 14.26 ? 5 DG A "C2'" 1 ATOM 93 C "C1'" . DG A 1 6 ? 10.706 28.770 12.600 1.00 16.82 ? 5 DG A "C1'" 1 ATOM 94 N N9 . DG A 1 6 ? 9.563 27.890 12.403 1.00 20.02 ? 5 DG A N9 1 ATOM 95 C C8 . DG A 1 6 ? 8.548 27.559 13.255 1.00 28.16 ? 5 DG A C8 1 ATOM 96 N N7 . DG A 1 6 ? 7.683 26.728 12.729 1.00 36.76 ? 5 DG A N7 1 ATOM 97 C C5 . DG A 1 6 ? 8.146 26.488 11.443 1.00 21.65 ? 5 DG A C5 1 ATOM 98 C C6 . DG A 1 6 ? 7.643 25.678 10.388 1.00 36.72 ? 5 DG A C6 1 ATOM 99 O O6 . DG A 1 6 ? 6.641 24.957 10.330 1.00 31.28 ? 5 DG A O6 1 ATOM 100 N N1 . DG A 1 6 ? 8.446 25.737 9.249 1.00 22.05 ? 5 DG A N1 1 ATOM 101 C C2 . DG A 1 6 ? 9.592 26.490 9.149 1.00 25.44 ? 5 DG A C2 1 ATOM 102 N N2 . DG A 1 6 ? 10.250 26.437 7.984 1.00 24.05 ? 5 DG A N2 1 ATOM 103 N N3 . DG A 1 6 ? 10.070 27.249 10.128 1.00 22.71 ? 5 DG A N3 1 ATOM 104 C C4 . DG A 1 6 ? 9.305 27.199 11.227 1.00 18.03 ? 5 DG A C4 1 ATOM 105 O "O5'" . DC B 1 1 ? 22.531 22.759 -0.959 1.00 51.61 ? 1 DC B "O5'" 1 ATOM 106 C "C5'" . DC B 1 1 ? 21.721 23.730 -0.234 1.00 37.70 ? 1 DC B "C5'" 1 ATOM 107 C "C4'" . DC B 1 1 ? 20.617 24.124 -1.206 1.00 43.02 ? 1 DC B "C4'" 1 ATOM 108 O "O4'" . DC B 1 1 ? 21.199 24.162 -2.555 1.00 39.10 ? 1 DC B "O4'" 1 ATOM 109 C "C3'" . DC B 1 1 ? 19.416 23.217 -1.305 1.00 25.95 ? 1 DC B "C3'" 1 ATOM 110 O "O3'" . DC B 1 1 ? 18.266 24.009 -1.046 1.00 39.90 ? 1 DC B "O3'" 1 ATOM 111 C "C2'" . DC B 1 1 ? 19.475 22.579 -2.716 1.00 32.46 ? 1 DC B "C2'" 1 ATOM 112 C "C1'" . DC B 1 1 ? 20.153 23.713 -3.483 1.00 43.27 ? 1 DC B "C1'" 1 ATOM 113 N N1 . DC B 1 1 ? 20.899 23.508 -4.726 1.00 34.94 ? 1 DC B N1 1 ATOM 114 C C2 . DC B 1 1 ? 20.471 24.259 -5.826 1.00 24.10 ? 1 DC B C2 1 ATOM 115 O O2 . DC B 1 1 ? 19.506 25.016 -5.638 1.00 25.92 ? 1 DC B O2 1 ATOM 116 N N3 . DC B 1 1 ? 21.112 24.125 -7.004 1.00 28.19 ? 1 DC B N3 1 ATOM 117 C C4 . DC B 1 1 ? 22.141 23.288 -7.120 1.00 31.25 ? 1 DC B C4 1 ATOM 118 N N4 . DC B 1 1 ? 22.728 23.203 -8.315 1.00 40.27 ? 1 DC B N4 1 ATOM 119 C C5 . DC B 1 1 ? 22.604 22.506 -6.016 1.00 40.38 ? 1 DC B C5 1 ATOM 120 C C6 . DC B 1 1 ? 21.953 22.654 -4.851 1.00 34.18 ? 1 DC B C6 1 ATOM 121 P P . DG B 1 2 ? 17.096 23.670 -0.011 1.00 38.61 ? 2 DG B P 1 ATOM 122 O OP1 . DG B 1 2 ? 16.826 22.246 -0.067 1.00 41.94 ? 2 DG B OP1 1 ATOM 123 O OP2 . DG B 1 2 ? 16.107 24.728 -0.068 1.00 39.27 ? 2 DG B OP2 1 ATOM 124 O "O5'" . DG B 1 2 ? 17.878 23.883 1.367 1.00 38.24 ? 2 DG B "O5'" 1 ATOM 125 C "C5'" . DG B 1 2 ? 18.856 24.969 1.450 1.00 21.62 ? 2 DG B "C5'" 1 ATOM 126 C "C4'" . DG B 1 2 ? 19.029 25.140 2.960 1.00 20.11 ? 2 DG B "C4'" 1 ATOM 127 O "O4'" . DG B 1 2 ? 17.686 25.173 3.544 1.00 25.07 ? 2 DG B "O4'" 1 ATOM 128 C "C3'" . DG B 1 2 ? 19.759 24.063 3.696 1.00 28.87 ? 2 DG B "C3'" 1 ATOM 129 O "O3'" . DG B 1 2 ? 21.166 24.377 3.662 1.00 25.97 ? 2 DG B "O3'" 1 ATOM 130 C "C2'" . DG B 1 2 ? 19.126 24.036 5.098 1.00 24.60 ? 2 DG B "C2'" 1 ATOM 131 C "C1'" . DG B 1 2 ? 17.701 24.576 4.863 1.00 20.90 ? 2 DG B "C1'" 1 ATOM 132 N N9 . DG B 1 2 ? 16.683 23.539 4.980 1.00 18.44 ? 2 DG B N9 1 ATOM 133 C C8 . DG B 1 2 ? 16.034 22.816 4.019 1.00 23.39 ? 2 DG B C8 1 ATOM 134 N N7 . DG B 1 2 ? 15.164 21.951 4.491 1.00 31.06 ? 2 DG B N7 1 ATOM 135 C C5 . DG B 1 2 ? 15.222 22.091 5.876 1.00 18.98 ? 2 DG B C5 1 ATOM 136 C C6 . DG B 1 2 ? 14.522 21.434 6.922 1.00 21.59 ? 2 DG B C6 1 ATOM 137 O O6 . DG B 1 2 ? 13.657 20.548 6.945 1.00 26.73 ? 2 DG B O6 1 ATOM 138 N N1 . DG B 1 2 ? 14.909 21.905 8.188 1.00 21.23 ? 2 DG B N1 1 ATOM 139 C C2 . DG B 1 2 ? 15.854 22.886 8.364 1.00 15.31 ? 2 DG B C2 1 ATOM 140 N N2 . DG B 1 2 ? 16.122 23.233 9.624 1.00 18.98 ? 2 DG B N2 1 ATOM 141 N N3 . DG B 1 2 ? 16.503 23.494 7.387 1.00 15.66 ? 2 DG B N3 1 ATOM 142 C C4 . DG B 1 2 ? 16.156 23.067 6.179 1.00 11.85 ? 2 DG B C4 1 ATOM 143 P P . DT B 1 3 ? 22.259 23.208 3.967 1.00 26.78 ? 3 DT B P 1 ATOM 144 O OP1 . DT B 1 3 ? 23.566 23.814 3.768 1.00 26.28 ? 3 DT B OP1 1 ATOM 145 O OP2 . DT B 1 3 ? 21.677 21.973 3.523 1.00 22.76 ? 3 DT B OP2 1 ATOM 146 O "O5'" . DT B 1 3 ? 22.115 23.159 5.580 1.00 25.66 ? 3 DT B "O5'" 1 ATOM 147 C "C5'" . DT B 1 3 ? 22.362 24.414 6.271 1.00 27.94 ? 3 DT B "C5'" 1 ATOM 148 C "C4'" . DT B 1 3 ? 22.329 24.119 7.766 1.00 30.47 ? 3 DT B "C4'" 1 ATOM 149 O "O4'" . DT B 1 3 ? 20.981 23.609 8.063 1.00 25.32 ? 3 DT B "O4'" 1 ATOM 150 C "C3'" . DT B 1 3 ? 23.272 23.091 8.338 1.00 26.72 ? 3 DT B "C3'" 1 ATOM 151 O "O3'" . DT B 1 3 ? 23.816 23.648 9.539 1.00 30.64 ? 3 DT B "O3'" 1 ATOM 152 C "C2'" . DT B 1 3 ? 22.458 21.799 8.538 1.00 16.20 ? 3 DT B "C2'" 1 ATOM 153 C "C1'" . DT B 1 3 ? 21.047 22.377 8.780 1.00 15.01 ? 3 DT B "C1'" 1 ATOM 154 N N1 . DT B 1 3 ? 19.931 21.551 8.307 1.00 15.01 ? 3 DT B N1 1 ATOM 155 C C2 . DT B 1 3 ? 18.991 21.125 9.220 1.00 19.96 ? 3 DT B C2 1 ATOM 156 O O2 . DT B 1 3 ? 19.056 21.419 10.416 1.00 22.41 ? 3 DT B O2 1 ATOM 157 N N3 . DT B 1 3 ? 17.977 20.354 8.710 1.00 20.11 ? 3 DT B N3 1 ATOM 158 C C4 . DT B 1 3 ? 17.822 19.968 7.391 1.00 13.88 ? 3 DT B C4 1 ATOM 159 O O4 . DT B 1 3 ? 16.878 19.283 7.052 1.00 16.28 ? 3 DT B O4 1 ATOM 160 C C5 . DT B 1 3 ? 18.848 20.457 6.483 1.00 12.16 ? 3 DT B C5 1 ATOM 161 C C7 . DT B 1 3 ? 18.709 20.059 5.052 1.00 16.04 ? 3 DT B C7 1 ATOM 162 C C6 . DT B 1 3 ? 19.838 21.203 6.969 1.00 17.56 ? 3 DT B C6 1 ATOM 163 P P . DA B 1 4 ? 24.786 22.864 10.556 1.00 29.01 ? 4 DA B P 1 ATOM 164 O OP1 . DA B 1 4 ? 25.419 23.838 11.414 1.00 23.46 ? 4 DA B OP1 1 ATOM 165 O OP2 . DA B 1 4 ? 25.398 21.805 9.762 1.00 26.90 ? 4 DA B OP2 1 ATOM 166 O "O5'" . DA B 1 4 ? 23.716 22.138 11.515 1.00 28.22 ? 4 DA B "O5'" 1 ATOM 167 C "C5'" . DA B 1 4 ? 22.944 22.924 12.459 1.00 21.71 ? 4 DA B "C5'" 1 ATOM 168 C "C4'" . DA B 1 4 ? 22.460 21.981 13.556 1.00 23.21 ? 4 DA B "C4'" 1 ATOM 169 O "O4'" . DA B 1 4 ? 21.349 21.191 12.997 1.00 19.84 ? 4 DA B "O4'" 1 ATOM 170 C "C3'" . DA B 1 4 ? 23.449 20.996 14.100 1.00 12.88 ? 4 DA B "C3'" 1 ATOM 171 O "O3'" . DA B 1 4 ? 23.289 20.869 15.508 1.00 20.53 ? 4 DA B "O3'" 1 ATOM 172 C "C2'" . DA B 1 4 ? 23.164 19.679 13.320 1.00 19.27 ? 4 DA B "C2'" 1 ATOM 173 C "C1'" . DA B 1 4 ? 21.652 19.780 13.124 1.00 16.10 ? 4 DA B "C1'" 1 ATOM 174 N N9 . DA B 1 4 ? 21.121 19.164 11.933 1.00 12.54 ? 4 DA B N9 1 ATOM 175 C C8 . DA B 1 4 ? 21.582 19.348 10.643 1.00 12.82 ? 4 DA B C8 1 ATOM 176 N N7 . DA B 1 4 ? 20.930 18.677 9.746 1.00 16.29 ? 4 DA B N7 1 ATOM 177 C C5 . DA B 1 4 ? 19.960 17.994 10.472 1.00 16.19 ? 4 DA B C5 1 ATOM 178 C C6 . DA B 1 4 ? 18.947 17.102 10.076 1.00 15.07 ? 4 DA B C6 1 ATOM 179 N N6 . DA B 1 4 ? 18.705 16.713 8.812 1.00 18.52 ? 4 DA B N6 1 ATOM 180 N N1 . DA B 1 4 ? 18.141 16.585 11.031 1.00 14.24 ? 4 DA B N1 1 ATOM 181 C C2 . DA B 1 4 ? 18.371 16.964 12.280 1.00 12.41 ? 4 DA B C2 1 ATOM 182 N N3 . DA B 1 4 ? 19.282 17.790 12.805 1.00 12.44 ? 4 DA B N3 1 ATOM 183 C C4 . DA B 1 4 ? 20.073 18.290 11.818 1.00 13.25 ? 4 DA B C4 1 ATOM 184 P P . DC B 1 5 ? 24.508 20.144 16.331 1.00 22.54 ? 5 DC B P 1 ATOM 185 O OP1 . DC B 1 5 ? 24.326 20.598 17.679 1.00 23.74 ? 5 DC B OP1 1 ATOM 186 O OP2 . DC B 1 5 ? 25.643 20.052 15.461 1.00 20.22 ? 5 DC B OP2 1 ATOM 187 O "O5'" . DC B 1 5 ? 23.974 18.599 16.306 1.00 13.89 ? 5 DC B "O5'" 1 ATOM 188 C "C5'" . DC B 1 5 ? 22.708 18.378 16.988 1.00 19.59 ? 5 DC B "C5'" 1 ATOM 189 C "C4'" . DC B 1 5 ? 22.382 16.904 16.829 1.00 13.12 ? 5 DC B "C4'" 1 ATOM 190 O "O4'" . DC B 1 5 ? 21.871 16.704 15.455 1.00 13.04 ? 5 DC B "O4'" 1 ATOM 191 C "C3'" . DC B 1 5 ? 23.496 15.890 16.988 1.00 10.77 ? 5 DC B "C3'" 1 ATOM 192 O "O3'" . DC B 1 5 ? 22.988 14.861 17.829 1.00 10.05 ? 5 DC B "O3'" 1 ATOM 193 C "C2'" . DC B 1 5 ? 23.877 15.428 15.577 1.00 9.74 ? 5 DC B "C2'" 1 ATOM 194 C "C1'" . DC B 1 5 ? 22.462 15.482 14.959 1.00 11.33 ? 5 DC B "C1'" 1 ATOM 195 N N1 . DC B 1 5 ? 22.372 15.517 13.507 1.00 11.25 ? 5 DC B N1 1 ATOM 196 C C2 . DC B 1 5 ? 21.293 14.846 12.946 1.00 11.99 ? 5 DC B C2 1 ATOM 197 O O2 . DC B 1 5 ? 20.533 14.302 13.759 1.00 10.46 ? 5 DC B O2 1 ATOM 198 N N3 . DC B 1 5 ? 21.142 14.839 11.614 1.00 8.54 ? 5 DC B N3 1 ATOM 199 C C4 . DC B 1 5 ? 22.011 15.452 10.810 1.00 9.14 ? 5 DC B C4 1 ATOM 200 N N4 . DC B 1 5 ? 21.774 15.387 9.502 1.00 12.28 ? 5 DC B N4 1 ATOM 201 C C5 . DC B 1 5 ? 23.119 16.148 11.354 1.00 11.90 ? 5 DC B C5 1 ATOM 202 C C6 . DC B 1 5 ? 23.261 16.152 12.688 1.00 11.83 ? 5 DC B C6 1 ATOM 203 P P . DG B 1 6 ? 24.012 13.987 18.668 1.00 13.08 ? 6 DG B P 1 ATOM 204 O OP1 . DG B 1 6 ? 23.221 13.251 19.641 1.00 17.78 ? 6 DG B OP1 1 ATOM 205 O OP2 . DG B 1 6 ? 25.179 14.776 19.014 1.00 16.59 ? 6 DG B OP2 1 ATOM 206 O "O5'" . DG B 1 6 ? 24.502 12.934 17.589 1.00 10.96 ? 6 DG B "O5'" 1 ATOM 207 C "C5'" . DG B 1 6 ? 23.535 12.057 16.931 1.00 14.67 ? 6 DG B "C5'" 1 ATOM 208 C "C4'" . DG B 1 6 ? 24.343 10.965 16.269 1.00 10.88 ? 6 DG B "C4'" 1 ATOM 209 O "O4'" . DG B 1 6 ? 25.334 11.561 15.372 1.00 12.10 ? 6 DG B "O4'" 1 ATOM 210 C "C3'" . DG B 1 6 ? 25.158 10.072 17.183 1.00 9.65 ? 6 DG B "C3'" 1 ATOM 211 O "O3'" . DG B 1 6 ? 24.354 8.965 17.605 1.00 11.65 ? 6 DG B "O3'" 1 ATOM 212 C "C2'" . DG B 1 6 ? 26.416 9.721 16.347 1.00 11.69 ? 6 DG B "C2'" 1 ATOM 213 C "C1'" . DG B 1 6 ? 26.678 11.094 15.754 1.00 13.43 ? 6 DG B "C1'" 1 ATOM 214 N N9 . DG B 1 6 ? 27.199 12.128 16.599 1.00 11.56 ? 6 DG B N9 1 ATOM 215 C C8 . DG B 1 6 ? 27.659 12.077 17.905 1.00 11.10 ? 6 DG B C8 1 ATOM 216 N N7 . DG B 1 6 ? 28.064 13.224 18.362 1.00 11.90 ? 6 DG B N7 1 ATOM 217 C C5 . DG B 1 6 ? 27.864 14.092 17.301 1.00 12.36 ? 6 DG B C5 1 ATOM 218 C C6 . DG B 1 6 ? 28.107 15.477 17.169 1.00 12.37 ? 6 DG B C6 1 ATOM 219 O O6 . DG B 1 6 ? 28.568 16.265 17.991 1.00 19.70 ? 6 DG B O6 1 ATOM 220 N N1 . DG B 1 6 ? 27.750 15.946 15.905 1.00 11.19 ? 6 DG B N1 1 ATOM 221 C C2 . DG B 1 6 ? 27.225 15.208 14.872 1.00 8.86 ? 6 DG B C2 1 ATOM 222 N N2 . DG B 1 6 ? 26.978 15.932 13.764 1.00 13.25 ? 6 DG B N2 1 ATOM 223 N N3 . DG B 1 6 ? 26.999 13.924 14.989 1.00 11.98 ? 6 DG B N3 1 ATOM 224 C C4 . DG B 1 6 ? 27.342 13.457 16.218 1.00 9.78 ? 6 DG B C4 1 HETATM 225 CO CO . CO C 2 . ? 18.063 11.911 5.710 1.00 21.38 ? 902 CO A CO 1 HETATM 226 C C1 A 7AD D 3 . ? 11.403 23.401 7.811 0.40 22.26 ? 101 7AD A C1 1 HETATM 227 C C2 A 7AD D 3 . ? 11.592 22.976 6.516 0.40 23.68 ? 101 7AD A C2 1 HETATM 228 C C3 A 7AD D 3 . ? 10.868 21.908 6.021 0.40 27.70 ? 101 7AD A C3 1 HETATM 229 C C4 A 7AD D 3 . ? 9.927 21.209 6.805 0.40 8.02 ? 101 7AD A C4 1 HETATM 230 C C5 A 7AD D 3 . ? 7.662 20.662 10.878 0.40 17.44 ? 101 7AD A C5 1 HETATM 231 C C6 A 7AD D 3 . ? 7.409 20.987 12.204 0.40 19.60 ? 101 7AD A C6 1 HETATM 232 C C7 A 7AD D 3 . ? 8.027 22.079 12.805 0.40 29.95 ? 101 7AD A C7 1 HETATM 233 C C8 A 7AD D 3 . ? 8.999 22.807 12.126 0.40 15.86 ? 101 7AD A C8 1 HETATM 234 C C9 A 7AD D 3 . ? 10.269 23.193 10.011 0.40 16.73 ? 101 7AD A C9 1 HETATM 235 N N10 A 7AD D 3 . ? 8.827 21.074 8.915 0.40 21.01 ? 101 7AD A N10 1 HETATM 236 C C11 A 7AD D 3 . ? 10.490 22.768 8.673 0.40 5.19 ? 101 7AD A C11 1 HETATM 237 C C12 A 7AD D 3 . ? 9.758 21.627 8.161 0.40 11.79 ? 101 7AD A C12 1 HETATM 238 C C13 A 7AD D 3 . ? 9.311 22.489 10.788 0.40 7.03 ? 101 7AD A C13 1 HETATM 239 C C14 A 7AD D 3 . ? 8.612 21.398 10.164 0.40 12.02 ? 101 7AD A C14 1 HETATM 240 N N1 A 7AD D 3 . ? 11.008 24.301 10.612 0.40 13.51 ? 101 7AD A N1 1 HETATM 241 C C1 C 7AD E 3 . ? 8.890 20.741 7.326 0.40 16.68 ? 601 7AD A C1 1 HETATM 242 C C2 C 7AD E 3 . ? 9.209 20.406 6.035 0.40 16.10 ? 601 7AD A C2 1 HETATM 243 C C3 C 7AD E 3 . ? 10.301 20.981 5.410 0.40 25.85 ? 601 7AD A C3 1 HETATM 244 C C4 C 7AD E 3 . ? 11.134 21.924 6.042 0.40 25.32 ? 601 7AD A C4 1 HETATM 245 C C5 C 7AD E 3 . ? 12.169 24.463 9.850 0.40 11.73 ? 601 7AD A C5 1 HETATM 246 C C6 C 7AD E 3 . ? 11.953 24.876 11.156 0.40 18.80 ? 601 7AD A C6 1 HETATM 247 C C7 C 7AD E 3 . ? 10.873 24.382 11.866 0.40 16.16 ? 601 7AD A C7 1 HETATM 248 C C8 C 7AD E 3 . ? 10.009 23.435 11.338 0.40 11.22 ? 601 7AD A C8 1 HETATM 249 C C9 C 7AD E 3 . ? 9.366 22.031 9.385 0.40 10.53 ? 601 7AD A C9 1 HETATM 250 N N10 C 7AD E 3 . ? 11.546 23.153 8.041 0.40 24.60 ? 601 7AD A N10 1 HETATM 251 C C11 C 7AD E 3 . ? 9.691 21.632 8.058 0.40 12.26 ? 601 7AD A C11 1 HETATM 252 C C12 C 7AD E 3 . ? 10.783 22.301 7.381 0.40 16.33 ? 601 7AD A C12 1 HETATM 253 C C13 C 7AD E 3 . ? 10.190 23.000 10.003 0.40 12.73 ? 601 7AD A C13 1 HETATM 254 C C14 C 7AD E 3 . ? 11.314 23.529 9.273 0.40 9.25 ? 601 7AD A C14 1 HETATM 255 N N1 C 7AD E 3 . ? 8.214 21.462 10.078 0.40 24.71 ? 601 7AD A N1 1 HETATM 256 CO CO . CO F 2 . ? 28.745 13.231 20.373 0.50 13.26 ? 901 CO B CO 1 HETATM 257 MG MG . MG G 4 . ? 14.997 26.062 0.000 0.50 23.54 ? 903 MG B MG 1 HETATM 258 MG MG . MG H 4 . ? 21.626 11.951 20.854 0.50 13.20 ? 904 MG B MG 1 HETATM 259 C C1 B 7AD I 3 . ? 11.880 23.553 6.281 0.20 18.27 ? 401 7AD B C1 1 HETATM 260 C C2 B 7AD I 3 . ? 11.110 22.815 7.150 0.20 20.02 ? 401 7AD B C2 1 HETATM 261 C C3 B 7AD I 3 . ? 11.238 22.987 8.515 0.20 17.95 ? 401 7AD B C3 1 HETATM 262 C C4 B 7AD I 3 . ? 12.164 23.891 9.068 0.20 2.00 ? 401 7AD B C4 1 HETATM 263 C C5 B 7AD I 3 . ? 15.481 27.197 8.439 0.20 14.67 ? 401 7AD B C5 1 HETATM 264 C C6 B 7AD I 3 . ? 16.298 27.987 7.642 0.20 12.69 ? 401 7AD B C6 1 HETATM 265 C C7 B 7AD I 3 . ? 16.247 27.907 6.259 0.20 10.80 ? 401 7AD B C7 1 HETATM 266 C C8 B 7AD I 3 . ? 15.371 27.021 5.645 0.20 9.70 ? 401 7AD B C8 1 HETATM 267 C C9 B 7AD I 3 . ? 13.620 25.259 5.861 0.20 10.14 ? 401 7AD B C9 1 HETATM 268 N N10 B 7AD I 3 . ? 13.827 25.564 8.617 0.20 12.12 ? 401 7AD B N10 1 HETATM 269 C C11 B 7AD I 3 . ? 12.844 24.463 6.745 0.20 0.00 ? 401 7AD B C11 1 HETATM 270 C C12 B 7AD I 3 . ? 12.930 24.702 8.173 0.20 1.00 ? 401 7AD B C12 1 HETATM 271 C C13 B 7AD I 3 . ? 14.525 26.195 6.414 0.20 15.49 ? 401 7AD B C13 1 HETATM 272 C C14 B 7AD I 3 . ? 14.584 26.305 7.852 0.20 12.86 ? 401 7AD B C14 1 HETATM 273 N N1 B 7AD I 3 . ? 13.507 25.098 4.415 0.20 21.16 ? 401 7AD B N1 1 HETATM 274 O O . HOH J 5 . ? 19.493 8.955 7.950 1.00 19.85 ? 907 HOH A O 1 HETATM 275 O O . HOH J 5 . ? 11.445 11.131 17.641 1.00 19.29 ? 908 HOH A O 1 HETATM 276 O O . HOH J 5 . ? 20.120 12.288 6.454 1.00 20.89 ? 909 HOH A O 1 HETATM 277 O O . HOH J 5 . ? 16.419 19.749 15.365 1.00 15.57 ? 912 HOH A O 1 HETATM 278 O O . HOH J 5 . ? 9.920 17.750 8.714 1.00 32.34 ? 917 HOH A O 1 HETATM 279 O O . HOH J 5 . ? 11.616 8.686 16.736 1.00 29.56 ? 919 HOH A O 1 HETATM 280 O O . HOH J 5 . ? 17.625 13.965 6.059 1.00 21.98 ? 920 HOH A O 1 HETATM 281 O O . HOH J 5 . ? 16.113 11.349 4.984 1.00 20.49 ? 921 HOH A O 1 HETATM 282 O O . HOH J 5 . ? 18.712 12.350 3.723 0.50 15.63 ? 922 HOH A O 1 HETATM 283 O O . HOH J 5 . ? 18.474 9.861 5.549 1.00 20.68 ? 923 HOH A O 1 HETATM 284 O O . HOH J 5 . ? 15.452 18.983 17.987 1.00 26.49 ? 924 HOH A O 1 HETATM 285 O O . HOH J 5 . ? 9.478 16.327 12.217 1.00 30.38 ? 925 HOH A O 1 HETATM 286 O O . HOH J 5 . ? 22.165 10.500 5.907 1.00 29.39 ? 928 HOH A O 1 HETATM 287 O O . HOH J 5 . ? 18.387 6.785 9.704 1.00 34.08 ? 4035 HOH A O 1 HETATM 288 O O . HOH K 5 . ? 28.745 16.612 20.373 0.50 9.22 ? 905 HOH B O 1 HETATM 289 O O . HOH K 5 . ? 21.258 18.131 7.146 1.00 23.10 ? 906 HOH B O 1 HETATM 290 O O . HOH K 5 . ? 24.183 7.362 15.297 1.00 11.61 ? 910 HOH B O 1 HETATM 291 O O . HOH K 5 . ? 30.038 11.424 19.912 1.00 19.44 ? 911 HOH B O 1 HETATM 292 O O . HOH K 5 . ? 26.252 18.659 13.255 1.00 26.35 ? 913 HOH B O 1 HETATM 293 O O . HOH K 5 . ? 22.588 19.725 5.433 1.00 21.56 ? 914 HOH B O 1 HETATM 294 O O . HOH K 5 . ? 30.320 14.234 19.894 0.50 10.78 ? 915 HOH B O 1 HETATM 295 O O . HOH K 5 . ? 22.142 2.522 16.264 1.00 27.68 ? 916 HOH B O 1 HETATM 296 O O . HOH K 5 . ? 23.162 5.177 16.970 1.00 27.72 ? 918 HOH B O 1 HETATM 297 O O . HOH K 5 . ? 14.372 26.062 2.127 0.25 19.74 ? 926 HOH B O 1 HETATM 298 O O . HOH K 5 . ? 29.898 8.999 20.894 1.00 21.13 ? 927 HOH B O 1 HETATM 299 O O . HOH K 5 . ? 26.251 23.066 14.145 1.00 55.37 ? 929 HOH B O 1 HETATM 300 O O . HOH K 5 . ? 28.172 18.643 16.018 1.00 22.38 ? 930 HOH B O 1 HETATM 301 O O . HOH K 5 . ? 13.554 20.181 2.938 1.00 36.47 ? 932 HOH B O 1 HETATM 302 O O . HOH K 5 . ? 26.540 17.258 20.440 1.00 30.99 ? 934 HOH B O 1 HETATM 303 O O . HOH K 5 . ? 32.749 11.738 19.486 1.00 23.37 ? 4036 HOH B O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 225 CO CO . CO C . ? 0.3146 0.3108 0.1872 -0.0093 -0.0010 -0.0452 902 CO A CO 256 CO CO . CO F . ? 0.1216 0.2297 0.1524 0.0000 -0.0266 0.0000 901 CO B CO 257 MG MG . MG G . ? 0.1170 0.5345 0.2431 0.0000 0.0000 -0.0161 903 MG B MG 258 MG MG . MG H . ? 0.0853 0.2623 0.1538 -0.0543 0.0011 0.0745 904 MG B MG # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 0 ? ? ? A . n A 1 2 DG 2 1 1 DG G A . n A 1 3 DT 3 2 2 DT T A . n A 1 4 DA 4 3 3 DA A A . n A 1 5 DC 5 4 4 DC C A . n A 1 6 DG 6 5 5 DG G A . n B 1 1 DC 1 1 1 DC C B . n B 1 2 DG 2 2 2 DG G B . n B 1 3 DT 3 3 3 DT T B . n B 1 4 DA 4 4 4 DA A B . n B 1 5 DC 5 5 5 DC C B . n B 1 6 DG 6 6 6 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO 1 902 902 CO CO A . D 3 7AD 1 101 101 7AD DAC A . E 3 7AD 1 601 601 7AD DAC A . F 2 CO 1 901 901 CO CO B . G 4 MG 1 903 903 MG MG B . H 4 MG 1 904 904 MG MG B . I 3 7AD 1 401 401 7AD DAC B . J 5 HOH 1 907 907 HOH HOH A . J 5 HOH 2 908 908 HOH HOH A . J 5 HOH 3 909 909 HOH HOH A . J 5 HOH 4 912 912 HOH HOH A . J 5 HOH 5 917 917 HOH HOH A . J 5 HOH 6 919 919 HOH HOH A . J 5 HOH 7 920 920 HOH HOH A . J 5 HOH 8 921 921 HOH HOH A . J 5 HOH 9 922 922 HOH HOH A . J 5 HOH 10 923 923 HOH HOH A . J 5 HOH 11 924 924 HOH HOH A . J 5 HOH 12 925 925 HOH HOH A . J 5 HOH 13 928 928 HOH HOH A . J 5 HOH 14 4035 4035 HOH HOH A . K 5 HOH 1 905 905 HOH HOH B . K 5 HOH 2 906 906 HOH HOH B . K 5 HOH 3 910 910 HOH HOH B . K 5 HOH 4 911 911 HOH HOH B . K 5 HOH 5 913 913 HOH HOH B . K 5 HOH 6 914 914 HOH HOH B . K 5 HOH 7 915 915 HOH HOH B . K 5 HOH 8 916 916 HOH HOH B . K 5 HOH 9 918 918 HOH HOH B . K 5 HOH 10 926 926 HOH HOH B . K 5 HOH 11 927 927 HOH HOH B . K 5 HOH 12 929 929 HOH HOH B . K 5 HOH 13 930 930 HOH HOH B . K 5 HOH 14 932 932 HOH HOH B . K 5 HOH 15 934 934 HOH HOH B . K 5 HOH 16 4036 4036 HOH HOH B . # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B CO 901 ? F CO . 2 1 B MG 903 ? G MG . 3 1 B 7AD 401 ? I 7AD . 4 1 B HOH 905 ? K HOH . 5 1 B HOH 926 ? K HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 2 ? A DG 1 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 909 ? 1_555 86.4 ? 2 N7 ? A DG 2 ? A DG 1 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 920 ? 1_555 88.5 ? 3 O ? J HOH . ? A HOH 909 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 920 ? 1_555 88.4 ? 4 N7 ? A DG 2 ? A DG 1 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 921 ? 1_555 93.0 ? 5 O ? J HOH . ? A HOH 909 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 921 ? 1_555 174.6 ? 6 O ? J HOH . ? A HOH 920 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 921 ? 1_555 96.9 ? 7 N7 ? A DG 2 ? A DG 1 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 922 ? 1_555 176.1 ? 8 O ? J HOH . ? A HOH 909 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 922 ? 1_555 89.7 ? 9 O ? J HOH . ? A HOH 920 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 922 ? 1_555 91.0 ? 10 O ? J HOH . ? A HOH 921 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 922 ? 1_555 90.9 ? 11 N7 ? A DG 2 ? A DG 1 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 923 ? 1_555 86.5 ? 12 O ? J HOH . ? A HOH 909 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 923 ? 1_555 90.6 ? 13 O ? J HOH . ? A HOH 920 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 923 ? 1_555 174.9 ? 14 O ? J HOH . ? A HOH 921 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 923 ? 1_555 84.1 ? 15 O ? J HOH . ? A HOH 922 ? 1_555 CO ? C CO . ? A CO 902 ? 1_555 O ? J HOH . ? A HOH 923 ? 1_555 94.0 ? 16 OP2 ? B DG 2 ? B DG 2 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 OP2 ? B DG 2 ? B DG 2 ? 2_665 158.9 ? 17 OP2 ? B DG 2 ? B DG 2 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 OP2 ? B DG 2 ? B DG 2 ? 4_565 100.5 ? 18 OP2 ? B DG 2 ? B DG 2 ? 2_665 MG ? G MG . ? B MG 903 ? 1_555 OP2 ? B DG 2 ? B DG 2 ? 4_565 100.3 ? 19 OP2 ? B DG 2 ? B DG 2 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 OP2 ? B DG 2 ? B DG 2 ? 3_655 100.3 ? 20 OP2 ? B DG 2 ? B DG 2 ? 2_665 MG ? G MG . ? B MG 903 ? 1_555 OP2 ? B DG 2 ? B DG 2 ? 3_655 59.0 ? 21 OP2 ? B DG 2 ? B DG 2 ? 4_565 MG ? G MG . ? B MG 903 ? 1_555 OP2 ? B DG 2 ? B DG 2 ? 3_655 158.9 ? 22 OP2 ? B DG 2 ? B DG 2 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 1_555 102.6 ? 23 OP2 ? B DG 2 ? B DG 2 ? 2_665 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 1_555 77.2 ? 24 OP2 ? B DG 2 ? B DG 2 ? 4_565 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 1_555 98.2 ? 25 OP2 ? B DG 2 ? B DG 2 ? 3_655 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 1_555 74.4 ? 26 OP2 ? B DG 2 ? B DG 2 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 3_655 98.2 ? 27 OP2 ? B DG 2 ? B DG 2 ? 2_665 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 3_655 74.4 ? 28 OP2 ? B DG 2 ? B DG 2 ? 4_565 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 3_655 102.6 ? 29 OP2 ? B DG 2 ? B DG 2 ? 3_655 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 3_655 77.2 ? 30 O ? K HOH . ? B HOH 926 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 3_655 147.3 ? 31 OP2 ? B DG 2 ? B DG 2 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 4_565 98.2 ? 32 OP2 ? B DG 2 ? B DG 2 ? 2_665 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 4_565 74.4 ? 33 OP2 ? B DG 2 ? B DG 2 ? 4_565 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 4_565 102.6 ? 34 OP2 ? B DG 2 ? B DG 2 ? 3_655 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 4_565 77.2 ? 35 O ? K HOH . ? B HOH 926 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 4_565 147.3 ? 36 O ? K HOH . ? B HOH 926 ? 3_655 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 4_565 0.0 ? 37 OP2 ? B DG 2 ? B DG 2 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 2_665 102.6 ? 38 OP2 ? B DG 2 ? B DG 2 ? 2_665 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 2_665 77.2 ? 39 OP2 ? B DG 2 ? B DG 2 ? 4_565 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 2_665 98.2 ? 40 OP2 ? B DG 2 ? B DG 2 ? 3_655 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 2_665 74.4 ? 41 O ? K HOH . ? B HOH 926 ? 1_555 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 2_665 0.0 ? 42 O ? K HOH . ? B HOH 926 ? 3_655 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 2_665 147.3 ? 43 O ? K HOH . ? B HOH 926 ? 4_565 MG ? G MG . ? B MG 903 ? 1_555 O ? K HOH . ? B HOH 926 ? 2_665 147.3 ? 44 N7 ? B DG 6 ? B DG 6 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 N7 ? B DG 6 ? B DG 6 ? 3_756 179.6 ? 45 N7 ? B DG 6 ? B DG 6 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 911 ? 1_555 89.3 ? 46 N7 ? B DG 6 ? B DG 6 ? 3_756 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 911 ? 1_555 90.4 ? 47 N7 ? B DG 6 ? B DG 6 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 911 ? 3_756 90.4 ? 48 N7 ? B DG 6 ? B DG 6 ? 3_756 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 911 ? 3_756 89.3 ? 49 O ? K HOH . ? B HOH 911 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 911 ? 3_756 74.4 ? 50 N7 ? B DG 6 ? B DG 6 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 1_555 91.6 ? 51 N7 ? B DG 6 ? B DG 6 ? 3_756 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 1_555 88.6 ? 52 O ? K HOH . ? B HOH 911 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 1_555 84.2 ? 53 O ? K HOH . ? B HOH 911 ? 3_756 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 1_555 158.5 ? 54 N7 ? B DG 6 ? B DG 6 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 3_756 88.5 ? 55 N7 ? B DG 6 ? B DG 6 ? 3_756 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 3_756 91.7 ? 56 O ? K HOH . ? B HOH 911 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 3_756 158.5 ? 57 O ? K HOH . ? B HOH 911 ? 3_756 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 3_756 84.2 ? 58 O ? K HOH . ? B HOH 915 ? 1_555 CO ? F CO . ? B CO 901 ? 1_555 O ? K HOH . ? B HOH 915 ? 3_756 117.3 ? 59 OP1 ? B DG 6 ? B DG 6 ? 1_555 MG ? H MG . ? B MG 904 ? 1_555 OP1 ? B DG 6 ? B DG 6 ? 6_655 91.8 ? 60 OP1 ? B DG 6 ? B DG 6 ? 1_555 MG ? H MG . ? B MG 904 ? 1_555 O ? K HOH . ? B HOH 4036 ? 3_756 56.0 ? 61 OP1 ? B DG 6 ? B DG 6 ? 6_655 MG ? H MG . ? B MG 904 ? 1_555 O ? K HOH . ? B HOH 4036 ? 3_756 147.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-05-11 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' pdbx_struct_special_symmetry 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 22 4 'Structure model' '_pdbx_struct_conn_angle.value' 23 4 'Structure model' '_struct_conn.pdbx_dist_value' 24 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 4 'Structure model' '_struct_conn.ptnr1_symmetry' 31 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 37 4 'Structure model' '_struct_conn.ptnr2_symmetry' 38 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 SHELX phasing . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 102.69 108.00 -5.31 0.70 N 2 1 C5 A DG 1 ? ? C6 A DG 1 ? ? O6 A DG 1 ? ? 124.94 128.60 -3.66 0.60 N 3 1 OP1 A DT 2 ? ? P A DT 2 ? ? OP2 A DT 2 ? ? 129.00 119.60 9.40 1.50 N 4 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 101.50 108.00 -6.50 0.70 N 5 1 "C3'" A DT 2 ? ? "O3'" A DT 2 ? ? P A DA 3 ? ? 131.41 119.70 11.71 1.20 Y 6 1 "O5'" A DA 3 ? ? "C5'" A DA 3 ? ? "C4'" A DA 3 ? ? 104.45 109.40 -4.95 0.80 N 7 1 OP1 A DC 4 ? ? P A DC 4 ? ? OP2 A DC 4 ? ? 129.85 119.60 10.25 1.50 N 8 1 "O5'" A DC 4 ? ? "C5'" A DC 4 ? ? "C4'" A DC 4 ? ? 100.63 109.40 -8.77 0.80 N 9 1 OP1 A DG 5 ? ? P A DG 5 ? ? OP2 A DG 5 ? ? 129.46 119.60 9.86 1.50 N 10 1 "O5'" A DG 5 ? ? "C5'" A DG 5 ? ? "C4'" A DG 5 ? ? 102.41 109.40 -6.99 0.80 N 11 1 N1 B DC 1 ? ? "C1'" B DC 1 ? ? "C2'" B DC 1 ? ? 123.26 114.30 8.96 1.40 N 12 1 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 102.50 108.00 -5.50 0.70 N 13 1 "O5'" B DG 2 ? ? "C5'" B DG 2 ? ? "C4'" B DG 2 ? ? 102.39 109.40 -7.01 0.80 N 14 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.05 108.30 2.75 0.30 N 15 1 N9 B DG 2 ? ? C4 B DG 2 ? ? C5 B DG 2 ? ? 107.81 105.40 2.41 0.40 N 16 1 N1 B DG 2 ? ? C6 B DG 2 ? ? O6 B DG 2 ? ? 114.55 119.90 -5.35 0.60 N 17 1 C5 B DG 2 ? ? C6 B DG 2 ? ? O6 B DG 2 ? ? 133.56 128.60 4.96 0.60 N 18 1 OP1 B DT 3 ? ? P B DT 3 ? ? OP2 B DT 3 ? ? 132.88 119.60 13.28 1.50 N 19 1 OP1 B DA 4 ? ? P B DA 4 ? ? OP2 B DA 4 ? ? 129.00 119.60 9.40 1.50 N 20 1 OP1 B DC 5 ? ? P B DC 5 ? ? OP2 B DC 5 ? ? 133.75 119.60 14.15 1.50 N 21 1 "C3'" B DC 5 ? ? "C2'" B DC 5 ? ? "C1'" B DC 5 ? ? 97.47 102.40 -4.93 0.80 N 22 1 N1 B DC 5 ? ? C2 B DC 5 ? ? O2 B DC 5 ? ? 115.07 118.90 -3.83 0.60 N 23 1 N3 B DG 6 ? ? C2 B DG 6 ? ? N2 B DG 6 ? ? 124.70 119.90 4.80 0.70 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 7AD 101 ? C10 ? D 7AD 1 C10 2 1 N 1 A 7AD 101 ? O1 ? D 7AD 1 O1 3 1 N 1 A 7AD 101 ? N2 ? D 7AD 1 N2 4 1 N 1 A 7AD 101 ? C15 ? D 7AD 1 C15 5 1 N 1 A 7AD 101 ? C16 ? D 7AD 1 C16 6 1 N 1 A 7AD 101 ? C17 ? D 7AD 1 C17 7 1 N 1 A 7AD 101 ? N3 ? D 7AD 1 N3 8 1 N 1 A 7AD 101 ? C18 ? D 7AD 1 C18 9 1 N 1 A 7AD 101 ? C19 ? D 7AD 1 C19 10 1 N 1 A 7AD 601 ? C10 ? E 7AD 1 C10 11 1 N 1 A 7AD 601 ? O1 ? E 7AD 1 O1 12 1 N 1 A 7AD 601 ? N2 ? E 7AD 1 N2 13 1 N 1 A 7AD 601 ? C15 ? E 7AD 1 C15 14 1 N 1 A 7AD 601 ? C16 ? E 7AD 1 C16 15 1 N 1 A 7AD 601 ? C17 ? E 7AD 1 C17 16 1 N 1 A 7AD 601 ? N3 ? E 7AD 1 N3 17 1 N 1 A 7AD 601 ? C18 ? E 7AD 1 C18 18 1 N 1 A 7AD 601 ? C19 ? E 7AD 1 C19 19 1 N 1 B 7AD 401 ? C10 ? I 7AD 1 C10 20 1 N 1 B 7AD 401 ? O1 ? I 7AD 1 O1 21 1 N 1 B 7AD 401 ? N2 ? I 7AD 1 N2 22 1 N 1 B 7AD 401 ? C15 ? I 7AD 1 C15 23 1 N 1 B 7AD 401 ? C16 ? I 7AD 1 C16 24 1 N 1 B 7AD 401 ? C17 ? I 7AD 1 C17 25 1 N 1 B 7AD 401 ? N3 ? I 7AD 1 N3 26 1 N 1 B 7AD 401 ? C18 ? I 7AD 1 C18 27 1 N 1 B 7AD 401 ? C19 ? I 7AD 1 C19 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id DC _pdbx_unobs_or_zero_occ_residues.auth_seq_id 0 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id DC _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 7AD C1 C Y N 1 7AD C2 C Y N 2 7AD C3 C Y N 3 7AD C4 C Y N 4 7AD C5 C Y N 5 7AD C6 C Y N 6 7AD C7 C Y N 7 7AD C8 C Y N 8 7AD C9 C Y N 9 7AD N10 N Y N 10 7AD C11 C Y N 11 7AD C12 C Y N 12 7AD C13 C Y N 13 7AD C14 C Y N 14 7AD N1 N N N 15 7AD C10 C N N 16 7AD O1 O N N 17 7AD N2 N N N 18 7AD C15 C N N 19 7AD C16 C N N 20 7AD C17 C N N 21 7AD N3 N N N 22 7AD C18 C N N 23 7AD C19 C N N 24 7AD H1 H N N 25 7AD H2 H N N 26 7AD H3 H N N 27 7AD H5 H N N 28 7AD H6 H N N 29 7AD H7 H N N 30 7AD H8 H N N 31 7AD HN11 H N N 32 7AD HN12 H N N 33 7AD HN2 H N N 34 7AD H151 H N N 35 7AD H152 H N N 36 7AD H161 H N N 37 7AD H162 H N N 38 7AD H171 H N N 39 7AD H172 H N N 40 7AD H181 H N N 41 7AD H182 H N N 42 7AD H183 H N N 43 7AD H191 H N N 44 7AD H192 H N N 45 7AD H193 H N N 46 CO CO CO N N 47 DA OP3 O N N 48 DA P P N N 49 DA OP1 O N N 50 DA OP2 O N N 51 DA "O5'" O N N 52 DA "C5'" C N N 53 DA "C4'" C N R 54 DA "O4'" O N N 55 DA "C3'" C N S 56 DA "O3'" O N N 57 DA "C2'" C N N 58 DA "C1'" C N R 59 DA N9 N Y N 60 DA C8 C Y N 61 DA N7 N Y N 62 DA C5 C Y N 63 DA C6 C Y N 64 DA N6 N N N 65 DA N1 N Y N 66 DA C2 C Y N 67 DA N3 N Y N 68 DA C4 C Y N 69 DA HOP3 H N N 70 DA HOP2 H N N 71 DA "H5'" H N N 72 DA "H5''" H N N 73 DA "H4'" H N N 74 DA "H3'" H N N 75 DA "HO3'" H N N 76 DA "H2'" H N N 77 DA "H2''" H N N 78 DA "H1'" H N N 79 DA H8 H N N 80 DA H61 H N N 81 DA H62 H N N 82 DA H2 H N N 83 DC OP3 O N N 84 DC P P N N 85 DC OP1 O N N 86 DC OP2 O N N 87 DC "O5'" O N N 88 DC "C5'" C N N 89 DC "C4'" C N R 90 DC "O4'" O N N 91 DC "C3'" C N S 92 DC "O3'" O N N 93 DC "C2'" C N N 94 DC "C1'" C N R 95 DC N1 N N N 96 DC C2 C N N 97 DC O2 O N N 98 DC N3 N N N 99 DC C4 C N N 100 DC N4 N N N 101 DC C5 C N N 102 DC C6 C N N 103 DC HOP3 H N N 104 DC HOP2 H N N 105 DC "H5'" H N N 106 DC "H5''" H N N 107 DC "H4'" H N N 108 DC "H3'" H N N 109 DC "HO3'" H N N 110 DC "H2'" H N N 111 DC "H2''" H N N 112 DC "H1'" H N N 113 DC H41 H N N 114 DC H42 H N N 115 DC H5 H N N 116 DC H6 H N N 117 DG OP3 O N N 118 DG P P N N 119 DG OP1 O N N 120 DG OP2 O N N 121 DG "O5'" O N N 122 DG "C5'" C N N 123 DG "C4'" C N R 124 DG "O4'" O N N 125 DG "C3'" C N S 126 DG "O3'" O N N 127 DG "C2'" C N N 128 DG "C1'" C N R 129 DG N9 N Y N 130 DG C8 C Y N 131 DG N7 N Y N 132 DG C5 C Y N 133 DG C6 C N N 134 DG O6 O N N 135 DG N1 N N N 136 DG C2 C N N 137 DG N2 N N N 138 DG N3 N N N 139 DG C4 C Y N 140 DG HOP3 H N N 141 DG HOP2 H N N 142 DG "H5'" H N N 143 DG "H5''" H N N 144 DG "H4'" H N N 145 DG "H3'" H N N 146 DG "HO3'" H N N 147 DG "H2'" H N N 148 DG "H2''" H N N 149 DG "H1'" H N N 150 DG H8 H N N 151 DG H1 H N N 152 DG H21 H N N 153 DG H22 H N N 154 DT OP3 O N N 155 DT P P N N 156 DT OP1 O N N 157 DT OP2 O N N 158 DT "O5'" O N N 159 DT "C5'" C N N 160 DT "C4'" C N R 161 DT "O4'" O N N 162 DT "C3'" C N S 163 DT "O3'" O N N 164 DT "C2'" C N N 165 DT "C1'" C N R 166 DT N1 N N N 167 DT C2 C N N 168 DT O2 O N N 169 DT N3 N N N 170 DT C4 C N N 171 DT O4 O N N 172 DT C5 C N N 173 DT C7 C N N 174 DT C6 C N N 175 DT HOP3 H N N 176 DT HOP2 H N N 177 DT "H5'" H N N 178 DT "H5''" H N N 179 DT "H4'" H N N 180 DT "H3'" H N N 181 DT "HO3'" H N N 182 DT "H2'" H N N 183 DT "H2''" H N N 184 DT "H1'" H N N 185 DT H3 H N N 186 DT H71 H N N 187 DT H72 H N N 188 DT H73 H N N 189 DT H6 H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 MG MG MG N N 194 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7AD C1 C2 doub Y N 1 7AD C1 C11 sing Y N 2 7AD C1 H1 sing N N 3 7AD C2 C3 sing Y N 4 7AD C2 H2 sing N N 5 7AD C3 C4 doub Y N 6 7AD C3 H3 sing N N 7 7AD C4 C12 sing Y N 8 7AD C4 C10 sing N N 9 7AD C5 C6 doub Y N 10 7AD C5 C14 sing Y N 11 7AD C5 H5 sing N N 12 7AD C6 C7 sing Y N 13 7AD C6 H6 sing N N 14 7AD C7 C8 doub Y N 15 7AD C7 H7 sing N N 16 7AD C8 C13 sing Y N 17 7AD C8 H8 sing N N 18 7AD C9 C11 sing Y N 19 7AD C9 C13 doub Y N 20 7AD C9 N1 sing N N 21 7AD N10 C12 sing Y N 22 7AD N10 C14 doub Y N 23 7AD C11 C12 doub Y N 24 7AD C13 C14 sing Y N 25 7AD N1 HN11 sing N N 26 7AD N1 HN12 sing N N 27 7AD C10 O1 doub N N 28 7AD C10 N2 sing N N 29 7AD N2 C15 sing N N 30 7AD N2 HN2 sing N N 31 7AD C15 C16 sing N N 32 7AD C15 H151 sing N N 33 7AD C15 H152 sing N N 34 7AD C16 C17 sing N N 35 7AD C16 H161 sing N N 36 7AD C16 H162 sing N N 37 7AD C17 N3 sing N N 38 7AD C17 H171 sing N N 39 7AD C17 H172 sing N N 40 7AD N3 C18 sing N N 41 7AD N3 C19 sing N N 42 7AD C18 H181 sing N N 43 7AD C18 H182 sing N N 44 7AD C18 H183 sing N N 45 7AD C19 H191 sing N N 46 7AD C19 H192 sing N N 47 7AD C19 H193 sing N N 48 DA OP3 P sing N N 49 DA OP3 HOP3 sing N N 50 DA P OP1 doub N N 51 DA P OP2 sing N N 52 DA P "O5'" sing N N 53 DA OP2 HOP2 sing N N 54 DA "O5'" "C5'" sing N N 55 DA "C5'" "C4'" sing N N 56 DA "C5'" "H5'" sing N N 57 DA "C5'" "H5''" sing N N 58 DA "C4'" "O4'" sing N N 59 DA "C4'" "C3'" sing N N 60 DA "C4'" "H4'" sing N N 61 DA "O4'" "C1'" sing N N 62 DA "C3'" "O3'" sing N N 63 DA "C3'" "C2'" sing N N 64 DA "C3'" "H3'" sing N N 65 DA "O3'" "HO3'" sing N N 66 DA "C2'" "C1'" sing N N 67 DA "C2'" "H2'" sing N N 68 DA "C2'" "H2''" sing N N 69 DA "C1'" N9 sing N N 70 DA "C1'" "H1'" sing N N 71 DA N9 C8 sing Y N 72 DA N9 C4 sing Y N 73 DA C8 N7 doub Y N 74 DA C8 H8 sing N N 75 DA N7 C5 sing Y N 76 DA C5 C6 sing Y N 77 DA C5 C4 doub Y N 78 DA C6 N6 sing N N 79 DA C6 N1 doub Y N 80 DA N6 H61 sing N N 81 DA N6 H62 sing N N 82 DA N1 C2 sing Y N 83 DA C2 N3 doub Y N 84 DA C2 H2 sing N N 85 DA N3 C4 sing Y N 86 DC OP3 P sing N N 87 DC OP3 HOP3 sing N N 88 DC P OP1 doub N N 89 DC P OP2 sing N N 90 DC P "O5'" sing N N 91 DC OP2 HOP2 sing N N 92 DC "O5'" "C5'" sing N N 93 DC "C5'" "C4'" sing N N 94 DC "C5'" "H5'" sing N N 95 DC "C5'" "H5''" sing N N 96 DC "C4'" "O4'" sing N N 97 DC "C4'" "C3'" sing N N 98 DC "C4'" "H4'" sing N N 99 DC "O4'" "C1'" sing N N 100 DC "C3'" "O3'" sing N N 101 DC "C3'" "C2'" sing N N 102 DC "C3'" "H3'" sing N N 103 DC "O3'" "HO3'" sing N N 104 DC "C2'" "C1'" sing N N 105 DC "C2'" "H2'" sing N N 106 DC "C2'" "H2''" sing N N 107 DC "C1'" N1 sing N N 108 DC "C1'" "H1'" sing N N 109 DC N1 C2 sing N N 110 DC N1 C6 sing N N 111 DC C2 O2 doub N N 112 DC C2 N3 sing N N 113 DC N3 C4 doub N N 114 DC C4 N4 sing N N 115 DC C4 C5 sing N N 116 DC N4 H41 sing N N 117 DC N4 H42 sing N N 118 DC C5 C6 doub N N 119 DC C5 H5 sing N N 120 DC C6 H6 sing N N 121 DG OP3 P sing N N 122 DG OP3 HOP3 sing N N 123 DG P OP1 doub N N 124 DG P OP2 sing N N 125 DG P "O5'" sing N N 126 DG OP2 HOP2 sing N N 127 DG "O5'" "C5'" sing N N 128 DG "C5'" "C4'" sing N N 129 DG "C5'" "H5'" sing N N 130 DG "C5'" "H5''" sing N N 131 DG "C4'" "O4'" sing N N 132 DG "C4'" "C3'" sing N N 133 DG "C4'" "H4'" sing N N 134 DG "O4'" "C1'" sing N N 135 DG "C3'" "O3'" sing N N 136 DG "C3'" "C2'" sing N N 137 DG "C3'" "H3'" sing N N 138 DG "O3'" "HO3'" sing N N 139 DG "C2'" "C1'" sing N N 140 DG "C2'" "H2'" sing N N 141 DG "C2'" "H2''" sing N N 142 DG "C1'" N9 sing N N 143 DG "C1'" "H1'" sing N N 144 DG N9 C8 sing Y N 145 DG N9 C4 sing Y N 146 DG C8 N7 doub Y N 147 DG C8 H8 sing N N 148 DG N7 C5 sing Y N 149 DG C5 C6 sing N N 150 DG C5 C4 doub Y N 151 DG C6 O6 doub N N 152 DG C6 N1 sing N N 153 DG N1 C2 sing N N 154 DG N1 H1 sing N N 155 DG C2 N2 sing N N 156 DG C2 N3 doub N N 157 DG N2 H21 sing N N 158 DG N2 H22 sing N N 159 DG N3 C4 sing N N 160 DT OP3 P sing N N 161 DT OP3 HOP3 sing N N 162 DT P OP1 doub N N 163 DT P OP2 sing N N 164 DT P "O5'" sing N N 165 DT OP2 HOP2 sing N N 166 DT "O5'" "C5'" sing N N 167 DT "C5'" "C4'" sing N N 168 DT "C5'" "H5'" sing N N 169 DT "C5'" "H5''" sing N N 170 DT "C4'" "O4'" sing N N 171 DT "C4'" "C3'" sing N N 172 DT "C4'" "H4'" sing N N 173 DT "O4'" "C1'" sing N N 174 DT "C3'" "O3'" sing N N 175 DT "C3'" "C2'" sing N N 176 DT "C3'" "H3'" sing N N 177 DT "O3'" "HO3'" sing N N 178 DT "C2'" "C1'" sing N N 179 DT "C2'" "H2'" sing N N 180 DT "C2'" "H2''" sing N N 181 DT "C1'" N1 sing N N 182 DT "C1'" "H1'" sing N N 183 DT N1 C2 sing N N 184 DT N1 C6 sing N N 185 DT C2 O2 doub N N 186 DT C2 N3 sing N N 187 DT N3 C4 sing N N 188 DT N3 H3 sing N N 189 DT C4 O4 doub N N 190 DT C4 C5 sing N N 191 DT C5 C7 sing N N 192 DT C5 C6 doub N N 193 DT C7 H71 sing N N 194 DT C7 H72 sing N N 195 DT C7 H73 sing N N 196 DT C6 H6 sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1RQY 'double helix' 1RQY 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 5 1_555 -0.383 -0.150 -0.167 -11.940 4.022 1.256 1 A_DG1:DC5_B A 1 ? B 5 ? 19 1 1 A DT 3 1_555 B DA 4 1_555 0.075 -0.220 0.154 1.411 -0.966 1.319 2 A_DT2:DA4_B A 2 ? B 4 ? 20 1 1 A DA 4 1_555 B DT 3 1_555 -0.014 -0.070 -0.355 -4.441 3.136 -4.866 3 A_DA3:DT3_B A 3 ? B 3 ? 20 1 1 A DC 5 1_555 B DG 2 1_555 0.203 0.018 -0.275 18.309 0.851 0.685 4 A_DC4:DG2_B A 4 ? B 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 5 1_555 A DT 3 1_555 B DA 4 1_555 -0.166 -0.262 3.041 -2.580 3.928 26.841 -1.467 -0.246 2.976 8.381 5.505 27.242 1 AA_DG1DT2:DA4DC5_BB A 1 ? B 5 ? A 2 ? B 4 ? 1 A DT 3 1_555 B DA 4 1_555 A DA 4 1_555 B DT 3 1_555 -0.132 -0.411 3.316 3.521 3.172 37.110 -1.061 0.672 3.246 4.958 -5.505 37.401 2 AA_DT2DA3:DT3DA4_BB A 2 ? B 4 ? A 3 ? B 3 ? 1 A DA 4 1_555 B DT 3 1_555 A DC 5 1_555 B DG 2 1_555 0.899 -0.491 2.883 -3.459 4.491 27.316 -1.933 -2.570 2.638 9.382 7.225 27.887 3 AA_DA3DC4:DG2DT3_BB A 3 ? B 3 ? A 4 ? B 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 '9-AMINO-N-[3-(DIMETHYLAMINO)PROPYL]ACRIDINE-4-CARBOXAMIDE' 7AD 4 'MAGNESIUM ION' MG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1FN1 _pdbx_initial_refinement_model.details 'PDB entry 1FN1' #
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