Acta Crystallographica Section F
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STRUCTURAL BIOLOGY
COMMUNICATIONS
Volume 66
|
Part 9
|
September 2010
|
Pages 1019–1022
https://doi.org/10.1107/S1744309110030034
Open
access
ISSN: 2053-230X
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STRUCTURAL BIOLOGY
COMMUNICATIONS
Volume 66
|
Part 9
|
September 2010
|
Pages 1019–1022
https://doi.org/10.1107/S1744309110030034
Open
access
ISSN: 2053-230X
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data_3GDD # _entry.id 3GDD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GDD pdb_00003gdd 10.2210/pdb3gdd/pdb NDB DD0106 ? ? RCSB RCSB051719 ? ? WWPDB D_1000051719 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.value' 14 3 'Structure model' '_struct_conn.pdbx_dist_value' 15 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GDD _pdbx_database_status.recvd_initial_deposition_date 2009-02-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Subirana, J.A.' 1 'De Luchi, D.' 2 'Wright, G.' 3 'Gouyette, C.' 4 # _citation.id primary _citation.title 'Structure of a stacked anthraquinone-DNA complex' _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_volume 66 _citation.page_first 1019 _citation.page_last 1022 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20823516 _citation.pdbx_database_id_DOI 10.1107/S1744309110030034 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'De Luchi, D.' 1 ? primary 'Uson, I.' 2 ? primary 'Wright, G.' 3 ? primary 'Gouyette, C.' 4 ? primary 'Subirana, J.A.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*(BRU)P*AP*GP*G)-3'" 1295.724 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "N,N'-(9,10-dioxo-9,10-dihydroanthracene-2,7-diyl)bis[2-(dimethylamino)acetamide]" 408.450 4 ? ? ? ? 4 water nat water 18.015 6 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(BRU)(DA)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can UAGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "N,N'-(9,10-dioxo-9,10-dihydroanthracene-2,7-diyl)bis[2-(dimethylamino)acetamide]" 5BD 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 BRU n 1 2 DA n 1 3 DG n 1 4 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;oligonucleotides were synthesized on an automatic synthesizer by the phosphoramidite method. The drug molecule was synthesized starting from the commercial anthraquinone' ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5BD non-polymer . "N,N'-(9,10-dioxo-9,10-dihydroanthracene-2,7-diyl)bis[2-(dimethylamino)acetamide]" ? 'C22 H24 N4 O4' 408.450 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 BRU 1 1 1 BRU BRU A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n B 1 1 BRU 1 1 1 BRU BRU B . n B 1 2 DA 2 2 2 DA A B . n B 1 3 DG 3 3 3 DG G B . n B 1 4 DG 4 4 4 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 5 1 MG MG A . D 3 5BD 1 6 1 5BD 5BD A . E 3 5BD 1 7 1 5BD 5BD A . F 3 5BD 1 8 1 5BD 5BD A . G 3 5BD 1 5 1 5BD 5BD B . H 4 HOH 1 9 1 HOH HOH A . H 4 HOH 2 10 2 HOH HOH A . H 4 HOH 3 11 3 HOH HOH A . H 4 HOH 4 12 4 HOH HOH A . H 4 HOH 5 13 5 HOH HOH A . H 4 HOH 6 14 6 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 5BD 6 ? C17 ? D 5BD 1 C17 2 1 N 1 A 5BD 6 ? C18 ? D 5BD 1 C18 3 1 N 1 A 5BD 6 ? N3 ? D 5BD 1 N3 4 1 N 1 A 5BD 6 ? N4 ? D 5BD 1 N4 5 1 N 1 A 5BD 6 ? C19 ? D 5BD 1 C19 6 1 N 1 A 5BD 6 ? C20 ? D 5BD 1 C20 7 1 N 1 A 5BD 6 ? C21 ? D 5BD 1 C21 8 1 N 1 A 5BD 6 ? C22 ? D 5BD 1 C22 9 1 N 1 A 5BD 7 ? C17 ? E 5BD 1 C17 10 1 N 1 A 5BD 7 ? C18 ? E 5BD 1 C18 11 1 N 1 A 5BD 7 ? N3 ? E 5BD 1 N3 12 1 N 1 A 5BD 7 ? N4 ? E 5BD 1 N4 13 1 N 1 A 5BD 7 ? C19 ? E 5BD 1 C19 14 1 N 1 A 5BD 7 ? C20 ? E 5BD 1 C20 15 1 N 1 A 5BD 7 ? C21 ? E 5BD 1 C21 16 1 N 1 A 5BD 7 ? C22 ? E 5BD 1 C22 17 1 N 1 A 5BD 8 ? C17 ? F 5BD 1 C17 18 1 N 1 A 5BD 8 ? C18 ? F 5BD 1 C18 19 1 N 1 A 5BD 8 ? N3 ? F 5BD 1 N3 20 1 N 1 A 5BD 8 ? N4 ? F 5BD 1 N4 21 1 N 1 A 5BD 8 ? C19 ? F 5BD 1 C19 22 1 N 1 A 5BD 8 ? C20 ? F 5BD 1 C20 23 1 N 1 A 5BD 8 ? C21 ? F 5BD 1 C21 24 1 N 1 A 5BD 8 ? C22 ? F 5BD 1 C22 25 1 N 1 B 5BD 5 ? C17 ? G 5BD 1 C17 26 1 N 1 B 5BD 5 ? C18 ? G 5BD 1 C18 27 1 N 1 B 5BD 5 ? N3 ? G 5BD 1 N3 28 1 N 1 B 5BD 5 ? N4 ? G 5BD 1 N4 29 1 N 1 B 5BD 5 ? C19 ? G 5BD 1 C19 30 1 N 1 B 5BD 5 ? C20 ? G 5BD 1 C20 31 1 N 1 B 5BD 5 ? C21 ? G 5BD 1 C21 32 1 N 1 B 5BD 5 ? C22 ? G 5BD 1 C22 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SOLVE phasing . ? 1 REFMAC refinement 5.2.0019 ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # _cell.entry_id 3GDD _cell.length_a 29.698 _cell.length_b 29.698 _cell.length_c 60.883 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GDD _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3GDD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.59 _exptl_crystal.density_percent_sol 52.51 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 310 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '22 mM cacodylate, 0.8 mM magnesium chloride, 15 mM sodium chloride, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 310K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2002-05-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.907 1.0 2 0.921 1.0 3 0.920 1.0 4 0.861 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM16' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM16 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.907,0.921,0.920,0.861 # _reflns.entry_id 3GDD _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 21.26 _reflns.d_resolution_high 2.8 _reflns.number_obs 757 _reflns.number_all 760 _reflns.percent_possible_obs 99.01 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_Rsym_value 0.035 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.89 _reflns_shell.percent_possible_all 90.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GDD _refine.ls_number_reflns_obs 757 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 21.26 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.01 _refine.ls_R_factor_obs 0.23335 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23202 _refine.ls_R_factor_R_free 0.25926 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 41 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.925 _refine.correlation_coeff_Fo_to_Fc_free 0.908 _refine.B_iso_mean 40.120 _refine.aniso_B[1][1] 2.41 _refine.aniso_B[2][2] 2.41 _refine.aniso_B[3][3] -4.82 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'The structure was solved in P43 space group and then refined in P 43 21 2' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.434 _refine.overall_SU_ML 0.261 _refine.overall_SU_B 30.138 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 164 _refine_hist.pdbx_number_atoms_ligand 89 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 259 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 21.26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.020 ? 286 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.769 3.000 ? 418 'X-RAY DIFFRACTION' ? r_chiral_restr 0.059 0.200 ? 30 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.002 0.020 ? 178 'X-RAY DIFFRACTION' ? r_nbd_refined 0.266 0.200 ? 85 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.338 0.200 ? 165 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.137 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.161 0.200 ? 78 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.090 0.200 ? 3 'X-RAY DIFFRACTION' ? r_mcbond_it 6.969 1.500 ? 4 'X-RAY DIFFRACTION' ? r_scbond_it 0.651 3.000 ? 281 'X-RAY DIFFRACTION' ? r_scangle_it 1.060 4.500 ? 418 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.803 _refine_ls_shell.d_res_low 2.875 _refine_ls_shell.number_reflns_R_work 50 _refine_ls_shell.R_factor_R_work 0.430 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.164 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 1 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3GDD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3GDD _struct.title 'An inverted anthraquinone-DNA crystal structure' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GDD _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'anthraquinone, telomere DNA sequence, drug-DNA complex, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3GDD _struct_ref.pdbx_db_accession 3GDD _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code UAGG _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GDD A 1 ? 4 ? 3GDD 1 ? 4 ? 1 4 2 1 3GDD B 1 ? 4 ? 3GDD 1 ? 4 ? 1 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A BRU 1 "O3'" ? ? ? 1_555 A DA 2 P ? ? A BRU 1 A DA 2 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale2 covale both ? B BRU 1 "O3'" ? ? ? 1_555 B DA 2 P ? ? B BRU 1 B DA 2 1_555 ? ? ? ? ? ? ? 1.601 ? ? metalc1 metalc ? ? C MG . MG ? ? ? 1_555 D 5BD . O4 ? ? A MG 5 A 5BD 6 1_555 ? ? ? ? ? ? ? 2.186 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 5 A HOH 9 1_555 ? ? ? ? ? ? ? 1.995 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 5 A HOH 10 1_555 ? ? ? ? ? ? ? 2.000 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 5 A HOH 11 1_555 ? ? ? ? ? ? ? 2.003 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 5 A HOH 12 1_555 ? ? ? ? ? ? ? 2.000 ? ? hydrog1 hydrog ? ? A BRU 1 N3 ? ? ? 1_555 B DA 2 N1 ? ? A BRU 1 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A BRU 1 O4 ? ? ? 1_555 B DA 2 N6 ? ? A BRU 1 B DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O4 ? D 5BD . ? A 5BD 6 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 9 ? 1_555 125.8 ? 2 O4 ? D 5BD . ? A 5BD 6 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 10 ? 1_555 74.4 ? 3 O ? H HOH . ? A HOH 9 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 10 ? 1_555 144.4 ? 4 O4 ? D 5BD . ? A 5BD 6 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 11 ? 1_555 126.3 ? 5 O ? H HOH . ? A HOH 9 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 11 ? 1_555 66.8 ? 6 O ? H HOH . ? A HOH 10 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 11 ? 1_555 77.6 ? 7 O4 ? D 5BD . ? A 5BD 6 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 12 ? 1_555 80.7 ? 8 O ? H HOH . ? A HOH 9 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 12 ? 1_555 74.1 ? 9 O ? H HOH . ? A HOH 10 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 12 ? 1_555 82.1 ? 10 O ? H HOH . ? A HOH 11 ? 1_555 MG ? C MG . ? A MG 5 ? 1_555 O ? H HOH . ? A HOH 12 ? 1_555 50.5 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 5 ? 6 'BINDING SITE FOR RESIDUE MG A 5' AC2 Software A 5BD 6 ? 9 'BINDING SITE FOR RESIDUE 5BD A 6' AC3 Software A 5BD 7 ? 3 'BINDING SITE FOR RESIDUE 5BD A 7' AC4 Software A 5BD 8 ? 6 'BINDING SITE FOR RESIDUE 5BD A 8' AC5 Software B 5BD 5 ? 4 'BINDING SITE FOR RESIDUE 5BD B 5' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 5BD D . ? 5BD A 6 . ? 1_555 ? 2 AC1 6 HOH H . ? HOH A 9 . ? 1_555 ? 3 AC1 6 HOH H . ? HOH A 10 . ? 1_555 ? 4 AC1 6 HOH H . ? HOH A 11 . ? 1_555 ? 5 AC1 6 HOH H . ? HOH A 12 . ? 1_555 ? 6 AC1 6 DG B 4 ? DG B 4 . ? 8_665 ? 7 AC2 9 BRU A 1 ? BRU A 1 . ? 5_645 ? 8 AC2 9 MG C . ? MG A 5 . ? 1_555 ? 9 AC2 9 5BD E . ? 5BD A 7 . ? 1_555 ? 10 AC2 9 HOH H . ? HOH A 10 . ? 1_555 ? 11 AC2 9 HOH H . ? HOH A 12 . ? 1_555 ? 12 AC2 9 HOH H . ? HOH A 14 . ? 1_555 ? 13 AC2 9 DA B 2 ? DA B 2 . ? 5_645 ? 14 AC2 9 DG B 3 ? DG B 3 . ? 5_645 ? 15 AC2 9 DG B 4 ? DG B 4 . ? 5_645 ? 16 AC3 3 DG A 3 ? DG A 3 . ? 1_555 ? 17 AC3 3 5BD D . ? 5BD A 6 . ? 1_555 ? 18 AC3 3 DG B 3 ? DG B 3 . ? 8_665 ? 19 AC4 6 DG A 3 ? DG A 3 . ? 1_555 ? 20 AC4 6 HOH H . ? HOH A 13 . ? 1_555 ? 21 AC4 6 DG B 3 ? DG B 3 . ? 8_665 ? 22 AC4 6 DG B 4 ? DG B 4 . ? 8_665 ? 23 AC4 6 5BD G . ? 5BD B 5 . ? 8_665 ? 24 AC4 6 5BD G . ? 5BD B 5 . ? 1_555 ? 25 AC5 4 5BD F . ? 5BD A 8 . ? 1_555 ? 26 AC5 4 5BD F . ? 5BD A 8 . ? 8_665 ? 27 AC5 4 DG B 4 ? DG B 4 . ? 8_665 ? 28 AC5 4 DG B 4 ? DG B 4 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.16 108.30 1.86 0.30 N 2 1 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 110.18 108.30 1.88 0.30 N 3 1 "C3'" B DG 3 ? ? "C2'" B DG 3 ? ? "C1'" B DG 3 ? ? 97.00 102.40 -5.40 0.80 N 4 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 110.75 108.30 2.45 0.30 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 1 A BRU 1 ? DU ? 2 B BRU 1 B BRU 1 ? DU ? # _struct_site_keywords.site_id 1 _struct_site_keywords.text 'OUTSIDE BINDER' # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id 5BD _pdbx_struct_special_symmetry.auth_seq_id 5 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id 5BD _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 26.7634 _pdbx_refine_tls.origin_y 1.6050 _pdbx_refine_tls.origin_z 21.8318 _pdbx_refine_tls.T[1][1] 0.0309 _pdbx_refine_tls.T[2][2] 0.0649 _pdbx_refine_tls.T[3][3] 0.1570 _pdbx_refine_tls.T[1][2] 0.0495 _pdbx_refine_tls.T[1][3] 0.0301 _pdbx_refine_tls.T[2][3] -0.0119 _pdbx_refine_tls.L[1][1] 2.2525 _pdbx_refine_tls.L[2][2] 1.3647 _pdbx_refine_tls.L[3][3] 13.2061 _pdbx_refine_tls.L[1][2] 1.2870 _pdbx_refine_tls.L[1][3] 1.9582 _pdbx_refine_tls.L[2][3] -1.5720 _pdbx_refine_tls.S[1][1] -0.1127 _pdbx_refine_tls.S[1][2] -0.0930 _pdbx_refine_tls.S[1][3] -0.2360 _pdbx_refine_tls.S[2][1] 0.1022 _pdbx_refine_tls.S[2][2] 0.4100 _pdbx_refine_tls.S[2][3] -0.0613 _pdbx_refine_tls.S[3][1] 0.3814 _pdbx_refine_tls.S[3][2] -0.5061 _pdbx_refine_tls.S[3][3] -0.2974 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.pdbx_refine_id 1 1 A 1 ? ? A 4 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 1 ? ? B 4 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 1 ? ? A 6 ? ? ? ? 'X-RAY DIFFRACTION' 4 1 A 1 ? ? A 7 ? ? ? ? 'X-RAY DIFFRACTION' 5 1 A 1 ? ? A 8 ? ? ? ? 'X-RAY DIFFRACTION' 6 1 B 1 ? ? B 5 ? ? ? ? 'X-RAY DIFFRACTION' 7 1 A 1 ? ? A 7 ? ? ? ? 'X-RAY DIFFRACTION' 8 1 I 1 ? ? I 2 ? ? ? ? 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5BD C1 C Y N 1 5BD C2 C Y N 2 5BD C3 C Y N 3 5BD C5 C Y N 4 5BD C6 C Y N 5 5BD C7 C Y N 6 5BD C8 C Y N 7 5BD C9 C N N 8 5BD C11 C Y N 9 5BD C12 C Y N 10 5BD C13 C N N 11 5BD C14 C N N 12 5BD O1 O N N 13 5BD N1 N N N 14 5BD C4 C Y N 15 5BD O2 O N N 16 5BD O3 O N N 17 5BD C15 C Y N 18 5BD C16 C Y N 19 5BD N2 N N N 20 5BD C10 C N N 21 5BD O4 O N N 22 5BD H1 H N N 23 5BD H2 H N N 24 5BD H5 H N N 25 5BD H7 H N N 26 5BD H8 H N N 27 5BD C17 C N N 28 5BD H4 H N N 29 5BD HN2 H N N 30 5BD C18 C N N 31 5BD H81 H N N 32 5BD H9 H N N 33 5BD N3 N N N 34 5BD H10 H N N 35 5BD H11 H N N 36 5BD H12 H N N 37 5BD N4 N N N 38 5BD C19 C N N 39 5BD C20 C N N 40 5BD H13 H N N 41 5BD H14 H N N 42 5BD H15 H N N 43 5BD H16 H N N 44 5BD H17 H N N 45 5BD H18 H N N 46 5BD C21 C N N 47 5BD C22 C N N 48 5BD H19 H N N 49 5BD H20 H N N 50 5BD H21 H N N 51 5BD H22 H N N 52 5BD H23 H N N 53 5BD H24 H N N 54 BRU N1 N N N 55 BRU C2 C N N 56 BRU N3 N N N 57 BRU C4 C N N 58 BRU C5 C N N 59 BRU C6 C N N 60 BRU O2 O N N 61 BRU O4 O N N 62 BRU BR BR N N 63 BRU "C1'" C N R 64 BRU "C2'" C N N 65 BRU "C3'" C N S 66 BRU "C4'" C N R 67 BRU "O3'" O N N 68 BRU "O4'" O N N 69 BRU "C5'" C N N 70 BRU "O5'" O N N 71 BRU P P N N 72 BRU OP1 O N N 73 BRU OP2 O N N 74 BRU OP3 O N N 75 BRU HN3 H N N 76 BRU H6 H N N 77 BRU "H1'" H N N 78 BRU "H2'" H N N 79 BRU "H2''" H N N 80 BRU "H3'" H N N 81 BRU "H4'" H N N 82 BRU "HO3'" H N N 83 BRU "H5'" H N N 84 BRU "H5''" H N N 85 BRU HOP2 H N N 86 BRU HOP3 H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DG OP3 O N N 124 DG P P N N 125 DG OP1 O N N 126 DG OP2 O N N 127 DG "O5'" O N N 128 DG "C5'" C N N 129 DG "C4'" C N R 130 DG "O4'" O N N 131 DG "C3'" C N S 132 DG "O3'" O N N 133 DG "C2'" C N N 134 DG "C1'" C N R 135 DG N9 N Y N 136 DG C8 C Y N 137 DG N7 N Y N 138 DG C5 C Y N 139 DG C6 C N N 140 DG O6 O N N 141 DG N1 N N N 142 DG C2 C N N 143 DG N2 N N N 144 DG N3 N N N 145 DG C4 C Y N 146 DG HOP3 H N N 147 DG HOP2 H N N 148 DG "H5'" H N N 149 DG "H5''" H N N 150 DG "H4'" H N N 151 DG "H3'" H N N 152 DG "HO3'" H N N 153 DG "H2'" H N N 154 DG "H2''" H N N 155 DG "H1'" H N N 156 DG H8 H N N 157 DG H1 H N N 158 DG H21 H N N 159 DG H22 H N N 160 HOH O O N N 161 HOH H1 H N N 162 HOH H2 H N N 163 MG MG MG N N 164 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5BD C1 C2 doub Y N 1 5BD C1 C11 sing Y N 2 5BD C1 H1 sing N N 3 5BD C2 C3 sing Y N 4 5BD C2 H2 sing N N 5 5BD C3 N1 sing N N 6 5BD C3 C4 doub Y N 7 5BD C5 C6 doub Y N 8 5BD C5 C16 sing Y N 9 5BD C5 H5 sing N N 10 5BD C6 C7 sing Y N 11 5BD C6 N2 sing N N 12 5BD C7 C8 doub Y N 13 5BD C7 H7 sing N N 14 5BD C8 C15 sing Y N 15 5BD C8 H8 sing N N 16 5BD C9 O1 doub N N 17 5BD C9 N1 sing N N 18 5BD C9 C17 sing N N 19 5BD C11 C12 doub Y N 20 5BD C11 C14 sing N N 21 5BD C12 C13 sing N N 22 5BD C12 C4 sing Y N 23 5BD C13 O2 doub N N 24 5BD C13 C16 sing N N 25 5BD C14 O3 doub N N 26 5BD C14 C15 sing N N 27 5BD N1 H81 sing N N 28 5BD C4 H4 sing N N 29 5BD C15 C16 doub Y N 30 5BD N2 C10 sing N N 31 5BD N2 HN2 sing N N 32 5BD C10 O4 doub N N 33 5BD C10 C18 sing N N 34 5BD C17 H9 sing N N 35 5BD C17 N3 sing N N 36 5BD C17 H10 sing N N 37 5BD C18 H11 sing N N 38 5BD C18 H12 sing N N 39 5BD C18 N4 sing N N 40 5BD N3 C19 sing N N 41 5BD N3 C20 sing N N 42 5BD N4 C21 sing N N 43 5BD N4 C22 sing N N 44 5BD C19 H16 sing N N 45 5BD C19 H17 sing N N 46 5BD C19 H18 sing N N 47 5BD C20 H13 sing N N 48 5BD C20 H14 sing N N 49 5BD C20 H15 sing N N 50 5BD C21 H19 sing N N 51 5BD C21 H20 sing N N 52 5BD C21 H21 sing N N 53 5BD C22 H22 sing N N 54 5BD C22 H23 sing N N 55 5BD C22 H24 sing N N 56 BRU N1 C2 sing N N 57 BRU N1 C6 sing N N 58 BRU N1 "C1'" sing N N 59 BRU C2 N3 sing N N 60 BRU C2 O2 doub N N 61 BRU N3 C4 sing N N 62 BRU N3 HN3 sing N N 63 BRU C4 C5 sing N N 64 BRU C4 O4 doub N N 65 BRU C5 C6 doub N N 66 BRU C5 BR sing N N 67 BRU C6 H6 sing N N 68 BRU "C1'" "C2'" sing N N 69 BRU "C1'" "O4'" sing N N 70 BRU "C1'" "H1'" sing N N 71 BRU "C2'" "C3'" sing N N 72 BRU "C2'" "H2'" sing N N 73 BRU "C2'" "H2''" sing N N 74 BRU "C3'" "C4'" sing N N 75 BRU "C3'" "O3'" sing N N 76 BRU "C3'" "H3'" sing N N 77 BRU "C4'" "O4'" sing N N 78 BRU "C4'" "C5'" sing N N 79 BRU "C4'" "H4'" sing N N 80 BRU "O3'" "HO3'" sing N N 81 BRU "C5'" "O5'" sing N N 82 BRU "C5'" "H5'" sing N N 83 BRU "C5'" "H5''" sing N N 84 BRU "O5'" P sing N N 85 BRU P OP1 doub N N 86 BRU P OP2 sing N N 87 BRU P OP3 sing N N 88 BRU OP2 HOP2 sing N N 89 BRU OP3 HOP3 sing N N 90 DA OP3 P sing N N 91 DA OP3 HOP3 sing N N 92 DA P OP1 doub N N 93 DA P OP2 sing N N 94 DA P "O5'" sing N N 95 DA OP2 HOP2 sing N N 96 DA "O5'" "C5'" sing N N 97 DA "C5'" "C4'" sing N N 98 DA "C5'" "H5'" sing N N 99 DA "C5'" "H5''" sing N N 100 DA "C4'" "O4'" sing N N 101 DA "C4'" "C3'" sing N N 102 DA "C4'" "H4'" sing N N 103 DA "O4'" "C1'" sing N N 104 DA "C3'" "O3'" sing N N 105 DA "C3'" "C2'" sing N N 106 DA "C3'" "H3'" sing N N 107 DA "O3'" "HO3'" sing N N 108 DA "C2'" "C1'" sing N N 109 DA "C2'" "H2'" sing N N 110 DA "C2'" "H2''" sing N N 111 DA "C1'" N9 sing N N 112 DA "C1'" "H1'" sing N N 113 DA N9 C8 sing Y N 114 DA N9 C4 sing Y N 115 DA C8 N7 doub Y N 116 DA C8 H8 sing N N 117 DA N7 C5 sing Y N 118 DA C5 C6 sing Y N 119 DA C5 C4 doub Y N 120 DA C6 N6 sing N N 121 DA C6 N1 doub Y N 122 DA N6 H61 sing N N 123 DA N6 H62 sing N N 124 DA N1 C2 sing Y N 125 DA C2 N3 doub Y N 126 DA C2 H2 sing N N 127 DA N3 C4 sing Y N 128 DG OP3 P sing N N 129 DG OP3 HOP3 sing N N 130 DG P OP1 doub N N 131 DG P OP2 sing N N 132 DG P "O5'" sing N N 133 DG OP2 HOP2 sing N N 134 DG "O5'" "C5'" sing N N 135 DG "C5'" "C4'" sing N N 136 DG "C5'" "H5'" sing N N 137 DG "C5'" "H5''" sing N N 138 DG "C4'" "O4'" sing N N 139 DG "C4'" "C3'" sing N N 140 DG "C4'" "H4'" sing N N 141 DG "O4'" "C1'" sing N N 142 DG "C3'" "O3'" sing N N 143 DG "C3'" "C2'" sing N N 144 DG "C3'" "H3'" sing N N 145 DG "O3'" "HO3'" sing N N 146 DG "C2'" "C1'" sing N N 147 DG "C2'" "H2'" sing N N 148 DG "C2'" "H2''" sing N N 149 DG "C1'" N9 sing N N 150 DG "C1'" "H1'" sing N N 151 DG N9 C8 sing Y N 152 DG N9 C4 sing Y N 153 DG C8 N7 doub Y N 154 DG C8 H8 sing N N 155 DG N7 C5 sing Y N 156 DG C5 C6 sing N N 157 DG C5 C4 doub Y N 158 DG C6 O6 doub N N 159 DG C6 N1 sing N N 160 DG N1 C2 sing N N 161 DG N1 H1 sing N N 162 DG C2 N2 sing N N 163 DG C2 N3 doub N N 164 DG N2 H21 sing N N 165 DG N2 H22 sing N N 166 DG N3 C4 sing N N 167 HOH O H1 sing N N 168 HOH O H2 sing N N 169 # _ndb_struct_conf_na.entry_id 3GDD _ndb_struct_conf_na.feature 'double helix' # _ndb_struct_na_base_pair.model_number 1 _ndb_struct_na_base_pair.i_label_asym_id A _ndb_struct_na_base_pair.i_label_comp_id BRU _ndb_struct_na_base_pair.i_label_seq_id 1 _ndb_struct_na_base_pair.i_symmetry 1_555 _ndb_struct_na_base_pair.j_label_asym_id B _ndb_struct_na_base_pair.j_label_comp_id DA _ndb_struct_na_base_pair.j_label_seq_id 2 _ndb_struct_na_base_pair.j_symmetry 1_555 _ndb_struct_na_base_pair.shear 0.155 _ndb_struct_na_base_pair.stretch 0.039 _ndb_struct_na_base_pair.stagger -0.642 _ndb_struct_na_base_pair.buckle 22.616 _ndb_struct_na_base_pair.propeller -15.226 _ndb_struct_na_base_pair.opening 3.350 _ndb_struct_na_base_pair.pair_number 1 _ndb_struct_na_base_pair.pair_name A_BRU1:DA2_B _ndb_struct_na_base_pair.i_auth_asym_id A _ndb_struct_na_base_pair.i_auth_seq_id 1 _ndb_struct_na_base_pair.i_PDB_ins_code ? _ndb_struct_na_base_pair.j_auth_asym_id B _ndb_struct_na_base_pair.j_auth_seq_id 2 _ndb_struct_na_base_pair.j_PDB_ins_code ? _ndb_struct_na_base_pair.hbond_type_28 20 _ndb_struct_na_base_pair.hbond_type_12 1 # _atom_sites.entry_id 3GDD _atom_sites.fract_transf_matrix[1][1] 0.033672 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033672 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016425 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 . BRU A 1 1 ? 25.414 3.691 31.783 1.00 56.79 ? 1 BRU A N1 1 HETATM 2 C C2 . BRU A 1 1 ? 26.484 4.161 30.975 1.00 53.96 ? 1 BRU A C2 1 HETATM 3 N N3 . BRU A 1 1 ? 27.585 4.692 31.523 1.00 53.37 ? 1 BRU A N3 1 HETATM 4 C C4 . BRU A 1 1 ? 27.714 4.801 32.848 1.00 55.53 ? 1 BRU A C4 1 HETATM 5 C C5 . BRU A 1 1 ? 26.617 4.323 33.733 1.00 58.69 ? 1 BRU A C5 1 HETATM 6 C C6 . BRU A 1 1 ? 25.487 3.780 33.125 1.00 59.35 ? 1 BRU A C6 1 HETATM 7 O O2 . BRU A 1 1 ? 26.423 4.087 29.727 1.00 52.25 ? 1 BRU A O2 1 HETATM 8 O O4 . BRU A 1 1 ? 28.756 5.297 33.321 1.00 55.98 ? 1 BRU A O4 1 HETATM 9 BR BR . BRU A 1 1 ? 26.714 4.427 35.297 1.00 62.53 ? 1 BRU A BR 1 HETATM 10 C "C1'" . BRU A 1 1 ? 24.211 3.133 31.139 1.00 58.36 ? 1 BRU A "C1'" 1 HETATM 11 C "C2'" . BRU A 1 1 ? 24.233 1.618 31.016 1.00 57.82 ? 1 BRU A "C2'" 1 HETATM 12 C "C3'" . BRU A 1 1 ? 22.780 1.213 31.192 1.00 62.18 ? 1 BRU A "C3'" 1 HETATM 13 C "C4'" . BRU A 1 1 ? 22.111 2.373 31.907 1.00 65.83 ? 1 BRU A "C4'" 1 HETATM 14 O "O3'" . BRU A 1 1 ? 22.139 1.065 29.921 1.00 61.43 ? 1 BRU A "O3'" 1 HETATM 15 O "O4'" . BRU A 1 1 ? 23.027 3.472 31.869 1.00 63.12 ? 1 BRU A "O4'" 1 HETATM 16 C "C5'" . BRU A 1 1 ? 21.732 2.019 33.344 1.00 70.39 ? 1 BRU A "C5'" 1 HETATM 17 O "O5'" . BRU A 1 1 ? 22.903 1.940 34.158 1.00 68.15 ? 1 BRU A "O5'" 1 ATOM 18 P P . DA A 1 2 ? 22.109 -0.337 29.148 1.00 61.09 ? 2 DA A P 1 ATOM 19 O OP1 . DA A 1 2 ? 21.108 -0.219 28.063 1.00 62.92 ? 2 DA A OP1 1 ATOM 20 O OP2 . DA A 1 2 ? 22.008 -1.431 30.142 1.00 64.45 ? 2 DA A OP2 1 ATOM 21 O "O5'" . DA A 1 2 ? 23.563 -0.403 28.486 1.00 54.66 ? 2 DA A "O5'" 1 ATOM 22 C "C5'" . DA A 1 2 ? 23.913 0.423 27.383 1.00 49.21 ? 2 DA A "C5'" 1 ATOM 23 C "C4'" . DA A 1 2 ? 25.325 0.111 26.910 1.00 44.82 ? 2 DA A "C4'" 1 ATOM 24 O "O4'" . DA A 1 2 ? 26.284 0.795 27.755 1.00 42.44 ? 2 DA A "O4'" 1 ATOM 25 C "C3'" . DA A 1 2 ? 25.731 -1.363 26.924 1.00 46.38 ? 2 DA A "C3'" 1 ATOM 26 O "O3'" . DA A 1 2 ? 26.544 -1.642 25.797 1.00 45.15 ? 2 DA A "O3'" 1 ATOM 27 C "C2'" . DA A 1 2 ? 26.552 -1.489 28.202 1.00 46.32 ? 2 DA A "C2'" 1 ATOM 28 C "C1'" . DA A 1 2 ? 27.243 -0.130 28.229 1.00 41.96 ? 2 DA A "C1'" 1 ATOM 29 N N9 . DA A 1 2 ? 27.701 0.317 29.545 1.00 41.99 ? 2 DA A N9 1 ATOM 30 C C8 . DA A 1 2 ? 27.274 -0.095 30.781 1.00 44.24 ? 2 DA A C8 1 ATOM 31 N N7 . DA A 1 2 ? 27.881 0.499 31.781 1.00 43.97 ? 2 DA A N7 1 ATOM 32 C C5 . DA A 1 2 ? 28.765 1.364 31.159 1.00 41.57 ? 2 DA A C5 1 ATOM 33 C C6 . DA A 1 2 ? 29.709 2.287 31.656 1.00 41.39 ? 2 DA A C6 1 ATOM 34 N N6 . DA A 1 2 ? 29.920 2.494 32.956 1.00 43.35 ? 2 DA A N6 1 ATOM 35 N N1 . DA A 1 2 ? 30.434 2.995 30.765 1.00 40.31 ? 2 DA A N1 1 ATOM 36 C C2 . DA A 1 2 ? 30.228 2.794 29.456 1.00 38.77 ? 2 DA A C2 1 ATOM 37 N N3 . DA A 1 2 ? 29.375 1.956 28.867 1.00 38.24 ? 2 DA A N3 1 ATOM 38 C C4 . DA A 1 2 ? 28.668 1.266 29.781 1.00 40.15 ? 2 DA A C4 1 ATOM 39 P P . DG A 1 3 ? 25.967 -2.403 24.517 1.00 47.10 ? 3 DG A P 1 ATOM 40 O OP1 . DG A 1 3 ? 25.331 -3.664 24.965 1.00 51.94 ? 3 DG A OP1 1 ATOM 41 O OP2 . DG A 1 3 ? 27.062 -2.441 23.519 1.00 45.74 ? 3 DG A OP2 1 ATOM 42 O "O5'" . DG A 1 3 ? 24.827 -1.406 23.999 1.00 45.24 ? 3 DG A "O5'" 1 ATOM 43 C "C5'" . DG A 1 3 ? 25.130 -0.287 23.165 1.00 41.50 ? 3 DG A "C5'" 1 ATOM 44 C "C4'" . DG A 1 3 ? 24.444 -0.396 21.811 1.00 41.84 ? 3 DG A "C4'" 1 ATOM 45 O "O4'" . DG A 1 3 ? 25.196 -1.306 20.971 1.00 42.97 ? 3 DG A "O4'" 1 ATOM 46 C "C3'" . DG A 1 3 ? 23.008 -0.929 21.809 1.00 45.55 ? 3 DG A "C3'" 1 ATOM 47 O "O3'" . DG A 1 3 ? 22.240 -0.207 20.854 1.00 44.30 ? 3 DG A "O3'" 1 ATOM 48 C "C2'" . DG A 1 3 ? 23.184 -2.384 21.377 1.00 49.19 ? 3 DG A "C2'" 1 ATOM 49 C "C1'" . DG A 1 3 ? 24.266 -2.158 20.335 1.00 47.12 ? 3 DG A "C1'" 1 ATOM 50 N N9 . DG A 1 3 ? 24.946 -3.332 19.796 1.00 50.10 ? 3 DG A N9 1 ATOM 51 C C8 . DG A 1 3 ? 25.823 -4.201 20.400 1.00 52.53 ? 3 DG A C8 1 ATOM 52 N N7 . DG A 1 3 ? 26.252 -5.140 19.596 1.00 56.26 ? 3 DG A N7 1 ATOM 53 C C5 . DG A 1 3 ? 25.623 -4.870 18.385 1.00 55.90 ? 3 DG A C5 1 ATOM 54 C C6 . DG A 1 3 ? 25.674 -5.524 17.123 1.00 59.50 ? 3 DG A C6 1 ATOM 55 O O6 . DG A 1 3 ? 26.323 -6.532 16.811 1.00 64.44 ? 3 DG A O6 1 ATOM 56 N N1 . DG A 1 3 ? 24.862 -4.898 16.164 1.00 57.71 ? 3 DG A N1 1 ATOM 57 C C2 . DG A 1 3 ? 24.094 -3.772 16.398 1.00 53.70 ? 3 DG A C2 1 ATOM 58 N N2 . DG A 1 3 ? 23.353 -3.263 15.398 1.00 53.13 ? 3 DG A N2 1 ATOM 59 N N3 . DG A 1 3 ? 24.043 -3.164 17.569 1.00 51.18 ? 3 DG A N3 1 ATOM 60 C C4 . DG A 1 3 ? 24.820 -3.760 18.503 1.00 52.14 ? 3 DG A C4 1 ATOM 61 P P . DG A 1 4 ? 21.243 0.969 21.274 1.00 44.70 ? 4 DG A P 1 ATOM 62 O OP1 . DG A 1 4 ? 20.554 0.572 22.523 1.00 48.55 ? 4 DG A OP1 1 ATOM 63 O OP2 . DG A 1 4 ? 20.443 1.296 20.075 1.00 46.25 ? 4 DG A OP2 1 ATOM 64 O "O5'" . DG A 1 4 ? 22.225 2.197 21.581 1.00 40.17 ? 4 DG A "O5'" 1 ATOM 65 C "C5'" . DG A 1 4 ? 22.650 3.093 20.555 1.00 36.73 ? 4 DG A "C5'" 1 ATOM 66 C "C4'" . DG A 1 4 ? 23.725 4.036 21.069 1.00 34.07 ? 4 DG A "C4'" 1 ATOM 67 O "O4'" . DG A 1 4 ? 24.629 3.338 21.965 1.00 32.48 ? 4 DG A "O4'" 1 ATOM 68 C "C3'" . DG A 1 4 ? 24.604 4.652 19.981 1.00 32.00 ? 4 DG A "C3'" 1 ATOM 69 O "O3'" . DG A 1 4 ? 24.455 6.065 19.996 1.00 34.06 ? 4 DG A "O3'" 1 ATOM 70 C "C2'" . DG A 1 4 ? 26.035 4.248 20.336 1.00 29.55 ? 4 DG A "C2'" 1 ATOM 71 C "C1'" . DG A 1 4 ? 25.921 3.890 21.813 1.00 29.91 ? 4 DG A "C1'" 1 ATOM 72 N N9 . DG A 1 4 ? 26.916 2.933 22.304 1.00 29.08 ? 4 DG A N9 1 ATOM 73 C C8 . DG A 1 4 ? 27.600 1.983 21.583 1.00 29.04 ? 4 DG A C8 1 ATOM 74 N N7 . DG A 1 4 ? 28.430 1.275 22.301 1.00 29.94 ? 4 DG A N7 1 ATOM 75 C C5 . DG A 1 4 ? 28.287 1.785 23.584 1.00 29.76 ? 4 DG A C5 1 ATOM 76 C C6 . DG A 1 4 ? 28.929 1.416 24.793 1.00 30.85 ? 4 DG A C6 1 ATOM 77 O O6 . DG A 1 4 ? 29.780 0.531 24.964 1.00 32.45 ? 4 DG A O6 1 ATOM 78 N N1 . DG A 1 4 ? 28.501 2.185 25.877 1.00 30.73 ? 4 DG A N1 1 ATOM 79 C C2 . DG A 1 4 ? 27.566 3.192 25.796 1.00 30.85 ? 4 DG A C2 1 ATOM 80 N N2 . DG A 1 4 ? 27.268 3.836 26.935 1.00 32.18 ? 4 DG A N2 1 ATOM 81 N N3 . DG A 1 4 ? 26.959 3.547 24.668 1.00 30.53 ? 4 DG A N3 1 ATOM 82 C C4 . DG A 1 4 ? 27.362 2.806 23.603 1.00 29.46 ? 4 DG A C4 1 HETATM 83 N N1 . BRU B 1 1 ? 36.261 3.651 28.506 1.00 50.57 ? 1 BRU B N1 1 HETATM 84 C C2 . BRU B 1 1 ? 35.136 2.826 28.801 1.00 48.22 ? 1 BRU B C2 1 HETATM 85 N N3 . BRU B 1 1 ? 34.665 2.711 30.054 1.00 47.91 ? 1 BRU B N3 1 HETATM 86 C C4 . BRU B 1 1 ? 35.231 3.367 31.074 1.00 49.77 ? 1 BRU B C4 1 HETATM 87 C C5 . BRU B 1 1 ? 36.402 4.245 30.804 1.00 53.11 ? 1 BRU B C5 1 HETATM 88 C C6 . BRU B 1 1 ? 36.867 4.339 29.496 1.00 53.34 ? 1 BRU B C6 1 HETATM 89 O O2 . BRU B 1 1 ? 34.563 2.182 27.893 1.00 46.52 ? 1 BRU B O2 1 HETATM 90 O O4 . BRU B 1 1 ? 34.765 3.241 32.226 1.00 49.72 ? 1 BRU B O4 1 HETATM 91 BR BR . BRU B 1 1 ? 37.102 5.044 31.951 1.00 57.54 ? 1 BRU B BR 1 HETATM 92 C "C1'" . BRU B 1 1 ? 36.749 3.754 27.117 1.00 50.90 ? 1 BRU B "C1'" 1 HETATM 93 C "C2'" . BRU B 1 1 ? 36.209 5.026 26.482 1.00 48.03 ? 1 BRU B "C2'" 1 HETATM 94 C "C3'" . BRU B 1 1 ? 37.415 5.941 26.381 1.00 52.22 ? 1 BRU B "C3'" 1 HETATM 95 C "C4'" . BRU B 1 1 ? 38.600 4.994 26.332 1.00 56.62 ? 1 BRU B "C4'" 1 HETATM 96 O "O3'" . BRU B 1 1 ? 37.356 6.782 25.228 1.00 51.64 ? 1 BRU B "O3'" 1 HETATM 97 O "O4'" . BRU B 1 1 ? 38.180 3.828 27.048 1.00 55.62 ? 1 BRU B "O4'" 1 HETATM 98 C "C5'" . BRU B 1 1 ? 39.852 5.597 26.957 1.00 62.62 ? 1 BRU B "C5'" 1 HETATM 99 O "O5'" . BRU B 1 1 ? 39.634 5.847 28.343 1.00 62.43 ? 1 BRU B "O5'" 1 ATOM 100 P P . DA B 1 2 ? 36.656 8.219 25.327 1.00 51.16 ? 2 DA B P 1 ATOM 101 O OP1 . DA B 1 2 ? 36.870 8.905 24.035 1.00 53.11 ? 2 DA B OP1 1 ATOM 102 O OP2 . DA B 1 2 ? 37.090 8.884 26.577 1.00 54.94 ? 2 DA B OP2 1 ATOM 103 O "O5'" . DA B 1 2 ? 35.107 7.849 25.466 1.00 45.78 ? 2 DA B "O5'" 1 ATOM 104 C "C5'" . DA B 1 2 ? 34.385 7.245 24.391 1.00 42.38 ? 2 DA B "C5'" 1 ATOM 105 C "C4'" . DA B 1 2 ? 32.985 7.831 24.298 1.00 40.41 ? 2 DA B "C4'" 1 ATOM 106 O "O4'" . DA B 1 2 ? 32.241 7.539 25.511 1.00 39.51 ? 2 DA B "O4'" 1 ATOM 107 C "C3'" . DA B 1 2 ? 32.936 9.350 24.118 1.00 43.20 ? 2 DA B "C3'" 1 ATOM 108 O "O3'" . DA B 1 2 ? 31.852 9.736 23.266 1.00 42.01 ? 2 DA B "O3'" 1 ATOM 109 C "C2'" . DA B 1 2 ? 32.703 9.822 25.547 1.00 45.36 ? 2 DA B "C2'" 1 ATOM 110 C "C1'" . DA B 1 2 ? 31.718 8.754 26.009 1.00 41.98 ? 2 DA B "C1'" 1 ATOM 111 N N9 . DA B 1 2 ? 31.515 8.661 27.456 1.00 43.04 ? 2 DA B N9 1 ATOM 112 C C8 . DA B 1 2 ? 32.046 9.468 28.424 1.00 46.72 ? 2 DA B C8 1 ATOM 113 N N7 . DA B 1 2 ? 31.682 9.146 29.642 1.00 47.31 ? 2 DA B N7 1 ATOM 114 C C5 . DA B 1 2 ? 30.849 8.056 29.464 1.00 43.61 ? 2 DA B C5 1 ATOM 115 C C6 . DA B 1 2 ? 30.132 7.247 30.373 1.00 43.14 ? 2 DA B C6 1 ATOM 116 N N6 . DA B 1 2 ? 30.156 7.440 31.696 1.00 45.42 ? 2 DA B N6 1 ATOM 117 N N1 . DA B 1 2 ? 29.391 6.231 29.870 1.00 40.66 ? 2 DA B N1 1 ATOM 118 C C2 . DA B 1 2 ? 29.374 6.047 28.542 1.00 38.79 ? 2 DA B C2 1 ATOM 119 N N3 . DA B 1 2 ? 30.006 6.742 27.594 1.00 38.55 ? 2 DA B N3 1 ATOM 120 C C4 . DA B 1 2 ? 30.733 7.743 28.122 1.00 41.17 ? 2 DA B C4 1 ATOM 121 P P . DG B 1 3 ? 31.972 9.833 21.668 1.00 41.48 ? 3 DG B P 1 ATOM 122 O OP1 . DG B 1 3 ? 33.370 10.150 21.290 1.00 44.84 ? 3 DG B OP1 1 ATOM 123 O OP2 . DG B 1 3 ? 30.878 10.706 21.192 1.00 42.33 ? 3 DG B OP2 1 ATOM 124 O "O5'" . DG B 1 3 ? 31.607 8.340 21.222 1.00 37.42 ? 3 DG B "O5'" 1 ATOM 125 C "C5'" . DG B 1 3 ? 32.607 7.377 20.907 1.00 36.56 ? 3 DG B "C5'" 1 ATOM 126 C "C4'" . DG B 1 3 ? 32.588 7.036 19.429 1.00 35.60 ? 3 DG B "C4'" 1 ATOM 127 O "O4'" . DG B 1 3 ? 31.399 7.559 18.780 1.00 34.69 ? 3 DG B "O4'" 1 ATOM 128 C "C3'" . DG B 1 3 ? 33.766 7.592 18.637 1.00 38.31 ? 3 DG B "C3'" 1 ATOM 129 O "O3'" . DG B 1 3 ? 34.187 6.610 17.695 1.00 37.69 ? 3 DG B "O3'" 1 ATOM 130 C "C2'" . DG B 1 3 ? 33.147 8.790 17.931 1.00 39.42 ? 3 DG B "C2'" 1 ATOM 131 C "C1'" . DG B 1 3 ? 31.829 8.129 17.566 1.00 36.40 ? 3 DG B "C1'" 1 ATOM 132 N N9 . DG B 1 3 ? 30.805 9.003 17.016 1.00 36.93 ? 3 DG B N9 1 ATOM 133 C C8 . DG B 1 3 ? 30.048 9.942 17.673 1.00 38.57 ? 3 DG B C8 1 ATOM 134 N N7 . DG B 1 3 ? 29.205 10.559 16.892 1.00 39.94 ? 3 DG B N7 1 ATOM 135 C C5 . DG B 1 3 ? 29.418 9.987 15.641 1.00 38.59 ? 3 DG B C5 1 ATOM 136 C C6 . DG B 1 3 ? 28.795 10.249 14.393 1.00 39.05 ? 3 DG B C6 1 ATOM 137 O O6 . DG B 1 3 ? 27.906 11.069 14.130 1.00 41.58 ? 3 DG B O6 1 ATOM 138 N N1 . DG B 1 3 ? 29.316 9.448 13.377 1.00 37.55 ? 3 DG B N1 1 ATOM 139 C C2 . DG B 1 3 ? 30.307 8.504 13.542 1.00 36.54 ? 3 DG B C2 1 ATOM 140 N N2 . DG B 1 3 ? 30.665 7.835 12.438 1.00 36.61 ? 3 DG B N2 1 ATOM 141 N N3 . DG B 1 3 ? 30.906 8.240 14.704 1.00 36.80 ? 3 DG B N3 1 ATOM 142 C C4 . DG B 1 3 ? 30.408 9.024 15.702 1.00 36.90 ? 3 DG B C4 1 ATOM 143 P P . DG B 1 4 ? 35.287 5.512 18.071 1.00 39.61 ? 4 DG B P 1 ATOM 144 O OP1 . DG B 1 4 ? 36.348 6.192 18.854 1.00 42.82 ? 4 DG B OP1 1 ATOM 145 O OP2 . DG B 1 4 ? 35.623 4.783 16.825 1.00 41.14 ? 4 DG B OP2 1 ATOM 146 O "O5'" . DG B 1 4 ? 34.503 4.512 19.044 1.00 36.40 ? 4 DG B "O5'" 1 ATOM 147 C "C5'" . DG B 1 4 ? 33.827 3.354 18.569 1.00 34.72 ? 4 DG B "C5'" 1 ATOM 148 C "C4'" . DG B 1 4 ? 33.412 2.496 19.753 1.00 33.90 ? 4 DG B "C4'" 1 ATOM 149 O "O4'" . DG B 1 4 ? 32.812 3.331 20.776 1.00 31.67 ? 4 DG B "O4'" 1 ATOM 150 C "C3'" . DG B 1 4 ? 32.394 1.403 19.453 1.00 33.16 ? 4 DG B "C3'" 1 ATOM 151 O "O3'" . DG B 1 4 ? 32.801 0.198 20.086 1.00 36.56 ? 4 DG B "O3'" 1 ATOM 152 C "C2'" . DG B 1 4 ? 31.093 1.932 20.053 1.00 30.34 ? 4 DG B "C2'" 1 ATOM 153 C "C1'" . DG B 1 4 ? 31.610 2.745 21.231 1.00 29.97 ? 4 DG B "C1'" 1 ATOM 154 N N9 . DG B 1 4 ? 30.742 3.831 21.683 1.00 28.51 ? 4 DG B N9 1 ATOM 155 C C8 . DG B 1 4 ? 29.885 4.601 20.929 1.00 27.64 ? 4 DG B C8 1 ATOM 156 N N7 . DG B 1 4 ? 29.250 5.505 21.623 1.00 27.99 ? 4 DG B N7 1 ATOM 157 C C5 . DG B 1 4 ? 29.721 5.330 22.918 1.00 28.43 ? 4 DG B C5 1 ATOM 158 C C6 . DG B 1 4 ? 29.401 6.021 24.110 1.00 29.74 ? 4 DG B C6 1 ATOM 159 O O6 . DG B 1 4 ? 28.608 6.959 24.257 1.00 31.34 ? 4 DG B O6 1 ATOM 160 N N1 . DG B 1 4 ? 30.102 5.529 25.210 1.00 30.20 ? 4 DG B N1 1 ATOM 161 C C2 . DG B 1 4 ? 31.006 4.495 25.162 1.00 30.13 ? 4 DG B C2 1 ATOM 162 N N2 . DG B 1 4 ? 31.591 4.152 26.318 1.00 31.43 ? 4 DG B N2 1 ATOM 163 N N3 . DG B 1 4 ? 31.316 3.839 24.051 1.00 29.78 ? 4 DG B N3 1 ATOM 164 C C4 . DG B 1 4 ? 30.639 4.306 22.971 1.00 28.63 ? 4 DG B C4 1 HETATM 165 MG MG . MG C 2 . ? 21.637 -8.360 10.759 0.50 93.96 ? 5 MG A MG 1 HETATM 166 C C1 . 5BD D 3 . ? 16.889 -5.498 19.439 1.00 111.31 ? 6 5BD A C1 1 HETATM 167 C C2 . 5BD D 3 . ? 16.038 -4.588 20.065 1.00 112.28 ? 6 5BD A C2 1 HETATM 168 C C3 . 5BD D 3 . ? 15.282 -3.687 19.305 1.00 112.88 ? 6 5BD A C3 1 HETATM 169 C C5 . 5BD D 3 . ? 17.275 -5.525 13.872 1.00 109.59 ? 6 5BD A C5 1 HETATM 170 C C6 . 5BD D 3 . ? 18.115 -6.415 13.210 1.00 110.69 ? 6 5BD A C6 1 HETATM 171 C C7 . 5BD D 3 . ? 18.874 -7.321 13.962 1.00 112.32 ? 6 5BD A C7 1 HETATM 172 C C8 . 5BD D 3 . ? 18.789 -7.330 15.356 1.00 112.06 ? 6 5BD A C8 1 HETATM 173 C C9 . 5BD D 3 . ? 14.189 -2.592 21.075 0.50 117.43 ? 6 5BD A C9 1 HETATM 174 C C11 . 5BD D 3 . ? 16.996 -5.519 18.046 1.00 110.51 ? 6 5BD A C11 1 HETATM 175 C C12 . 5BD D 3 . ? 16.238 -4.622 17.287 1.00 110.38 ? 6 5BD A C12 1 HETATM 176 C C13 . 5BD D 3 . ? 16.331 -4.625 15.896 1.00 109.81 ? 6 5BD A C13 1 HETATM 177 C C14 . 5BD D 3 . ? 17.847 -6.428 17.407 1.00 110.79 ? 6 5BD A C14 1 HETATM 178 O O1 . 5BD D 3 . ? 14.715 -3.243 21.961 0.50 116.74 ? 6 5BD A O1 1 HETATM 179 N N1 . 5BD D 3 . ? 14.427 -2.772 19.845 0.50 115.48 ? 6 5BD A N1 1 HETATM 180 C C4 . 5BD D 3 . ? 15.390 -3.716 17.920 1.00 111.76 ? 6 5BD A C4 1 HETATM 181 O O2 . 5BD D 3 . ? 15.656 -3.814 15.217 1.00 110.14 ? 6 5BD A O2 1 HETATM 182 O O3 . 5BD D 3 . ? 18.528 -7.234 18.081 1.00 112.11 ? 6 5BD A O3 1 HETATM 183 C C15 . 5BD D 3 . ? 17.940 -6.434 16.013 1.00 110.55 ? 6 5BD A C15 1 HETATM 184 C C16 . 5BD D 3 . ? 17.183 -5.527 15.262 1.00 109.69 ? 6 5BD A C16 1 HETATM 185 N N2 . 5BD D 3 . ? 18.136 -6.336 11.847 1.00 110.99 ? 6 5BD A N2 1 HETATM 186 C C10 . 5BD D 3 . ? 18.810 -7.035 11.034 1.00 112.89 ? 6 5BD A C10 1 HETATM 187 O O4 . 5BD D 3 . ? 19.585 -7.918 11.369 1.00 115.19 ? 6 5BD A O4 1 HETATM 188 C C1 . 5BD E 3 . ? 21.679 -5.745 17.211 1.00 81.88 ? 7 5BD A C1 1 HETATM 189 C C2 . 5BD E 3 . ? 22.486 -6.423 18.123 1.00 83.08 ? 7 5BD A C2 1 HETATM 190 C C3 . 5BD E 3 . ? 22.442 -6.100 19.484 1.00 81.49 ? 7 5BD A C3 1 HETATM 191 C C5 . 5BD E 3 . ? 18.230 -1.696 18.970 1.00 79.36 ? 7 5BD A C5 1 HETATM 192 C C6 . 5BD E 3 . ? 17.421 -1.011 18.058 1.00 81.20 ? 7 5BD A C6 1 HETATM 193 C C7 . 5BD E 3 . ? 17.484 -1.358 16.705 1.00 81.30 ? 7 5BD A C7 1 HETATM 194 C C8 . 5BD E 3 . ? 18.347 -2.361 16.271 1.00 80.15 ? 7 5BD A C8 1 HETATM 195 C C9 . 5BD E 3 . ? 24.045 -7.660 20.263 1.00 86.48 ? 7 5BD A C9 1 HETATM 196 C C11 . 5BD E 3 . ? 20.821 -4.733 17.648 1.00 79.72 ? 7 5BD A C11 1 HETATM 197 C C12 . 5BD E 3 . ? 20.766 -4.402 19.006 1.00 78.55 ? 7 5BD A C12 1 HETATM 198 C C13 . 5BD E 3 . ? 19.905 -3.391 19.452 1.00 77.78 ? 7 5BD A C13 1 HETATM 199 C C14 . 5BD E 3 . ? 20.015 -4.049 16.736 1.00 79.63 ? 7 5BD A C14 1 HETATM 200 O O1 . 5BD E 3 . ? 24.299 -8.151 19.173 1.00 89.21 ? 7 5BD A O1 1 HETATM 201 N N1 . 5BD E 3 . ? 23.204 -6.724 20.436 1.00 82.95 ? 7 5BD A N1 1 HETATM 202 C C4 . 5BD E 3 . ? 21.576 -5.091 19.911 1.00 79.11 ? 7 5BD A C4 1 HETATM 203 O O2 . 5BD E 3 . ? 19.859 -3.095 20.667 1.00 77.38 ? 7 5BD A O2 1 HETATM 204 O O3 . 5BD E 3 . ? 20.061 -4.344 15.520 1.00 80.81 ? 7 5BD A O3 1 HETATM 205 C C15 . 5BD E 3 . ? 19.153 -3.043 17.182 1.00 79.13 ? 7 5BD A C15 1 HETATM 206 C C16 . 5BD E 3 . ? 19.096 -2.710 18.540 1.00 78.44 ? 7 5BD A C16 1 HETATM 207 N N2 . 5BD E 3 . ? 16.591 -0.029 18.524 1.00 83.71 ? 7 5BD A N2 1 HETATM 208 C C10 . 5BD E 3 . ? 15.790 0.691 17.843 1.00 86.63 ? 7 5BD A C10 1 HETATM 209 O O4 . 5BD E 3 . ? 15.642 0.607 16.631 1.00 86.97 ? 7 5BD A O4 1 HETATM 210 C C1 . 5BD F 3 . ? 26.611 -2.017 14.933 1.00 48.38 ? 8 5BD A C1 1 HETATM 211 C C2 . 5BD F 3 . ? 27.447 -2.561 15.903 1.00 49.49 ? 8 5BD A C2 1 HETATM 212 C C3 . 5BD F 3 . ? 27.413 -2.081 17.215 1.00 47.25 ? 8 5BD A C3 1 HETATM 213 C C5 . 5BD F 3 . ? 23.078 2.105 16.240 1.00 43.48 ? 8 5BD A C5 1 HETATM 214 C C6 . 5BD F 3 . ? 22.244 2.653 15.265 1.00 45.10 ? 8 5BD A C6 1 HETATM 215 C C7 . 5BD F 3 . ? 22.303 2.155 13.957 1.00 45.56 ? 8 5BD A C7 1 HETATM 216 C C8 . 5BD F 3 . ? 23.182 1.126 13.632 1.00 45.10 ? 8 5BD A C8 1 HETATM 217 C C9 . 5BD F 3 . ? 29.069 -3.519 18.072 0.75 52.58 ? 8 5BD A C9 1 HETATM 218 C C11 . 5BD F 3 . ? 25.731 -0.986 15.263 1.00 45.58 ? 8 5BD A C11 1 HETATM 219 C C12 . 5BD F 3 . ? 25.689 -0.498 16.574 1.00 43.89 ? 8 5BD A C12 1 HETATM 220 C C13 . 5BD F 3 . ? 24.803 0.532 16.904 1.00 42.65 ? 8 5BD A C13 1 HETATM 221 C C14 . 5BD F 3 . ? 24.896 -0.447 14.284 1.00 45.42 ? 8 5BD A C14 1 HETATM 222 O O1 . 5BD F 3 . ? 29.282 -4.100 17.016 0.75 55.75 ? 8 5BD A O1 1 HETATM 223 N N1 . 5BD F 3 . ? 28.216 -2.586 18.199 0.75 48.66 ? 8 5BD A N1 1 HETATM 224 C C4 . 5BD F 3 . ? 26.531 -1.048 17.544 1.00 44.33 ? 8 5BD A C4 1 HETATM 225 O O2 . 5BD F 3 . ? 24.765 0.972 18.076 1.00 41.84 ? 8 5BD A O2 1 HETATM 226 O O3 . 5BD F 3 . ? 24.941 -0.888 13.115 1.00 47.20 ? 8 5BD A O3 1 HETATM 227 C C15 . 5BD F 3 . ? 24.012 0.581 14.612 1.00 44.26 ? 8 5BD A C15 1 HETATM 228 C C16 . 5BD F 3 . ? 23.967 1.075 15.922 1.00 43.15 ? 8 5BD A C16 1 HETATM 229 N N2 . 5BD F 3 . ? 21.396 3.659 15.637 1.00 47.02 ? 8 5BD A N2 1 HETATM 230 C C10 . 5BD F 3 . ? 20.567 4.275 14.893 1.00 49.59 ? 8 5BD A C10 1 HETATM 231 O O4 . 5BD F 3 . ? 20.411 4.036 13.702 1.00 50.08 ? 8 5BD A O4 1 HETATM 232 C C1 . 5BD G 3 . ? 29.929 -0.487 14.322 0.50 38.42 ? 5 5BD B C1 1 HETATM 233 C C2 . 5BD G 3 . ? 30.849 -1.129 15.152 0.50 40.85 ? 5 5BD B C2 1 HETATM 234 C C3 . 5BD G 3 . ? 30.937 -0.789 16.505 0.50 39.05 ? 5 5BD B C3 1 HETATM 235 C C5 . 5BD G 3 . ? 26.567 3.475 16.386 0.50 30.16 ? 5 5BD B C5 1 HETATM 236 C C6 . 5BD G 3 . ? 25.645 4.126 15.567 0.50 30.88 ? 5 5BD B C6 1 HETATM 237 C C7 . 5BD G 3 . ? 25.572 3.770 14.217 0.50 31.41 ? 5 5BD B C7 1 HETATM 238 C C8 . 5BD G 3 . ? 26.408 2.785 13.697 0.50 31.65 ? 5 5BD B C8 1 HETATM 239 C C9 . 5BD G 3 . ? 32.662 -2.289 17.132 0.50 46.75 ? 5 5BD B C9 1 HETATM 240 C C11 . 5BD G 3 . ? 29.086 0.505 14.831 0.50 34.83 ? 5 5BD B C11 1 HETATM 241 C C12 . 5BD G 3 . ? 29.167 0.852 16.183 0.50 33.43 ? 5 5BD B C12 1 HETATM 242 C C13 . 5BD G 3 . ? 28.329 1.843 16.706 0.50 31.22 ? 5 5BD B C13 1 HETATM 243 C C14 . 5BD G 3 . ? 28.163 1.149 14.001 0.50 33.61 ? 5 5BD B C14 1 HETATM 244 O O1 . 5BD G 3 . ? 32.819 -2.792 16.031 0.50 49.93 ? 5 5BD B O1 1 HETATM 245 N N1 . 5BD G 3 . ? 31.813 -1.377 17.377 0.50 41.75 ? 5 5BD B N1 1 HETATM 246 C C4 . 5BD G 3 . ? 30.090 0.202 17.005 0.50 35.18 ? 5 5BD B C4 1 HETATM 247 O O2 . 5BD G 3 . ? 28.401 2.154 17.917 0.25 30.53 ? 5 5BD B O2 1 HETATM 248 O O3 . 5BD G 3 . ? 28.087 0.844 12.789 0.25 35.03 ? 5 5BD B O3 1 HETATM 249 C C15 . 5BD G 3 . ? 27.327 2.139 14.522 0.50 31.68 ? 5 5BD B C15 1 HETATM 250 C C16 . 5BD G 3 . ? 27.408 2.486 15.874 0.50 30.69 ? 5 5BD B C16 1 HETATM 251 N N2 . 5BD G 3 . ? 24.851 5.086 16.131 0.50 31.96 ? 5 5BD B N2 1 HETATM 252 C C10 . 5BD G 3 . ? 23.955 5.788 15.564 0.50 33.89 ? 5 5BD B C10 1 HETATM 253 O O4 . 5BD G 3 . ? 23.660 5.703 14.381 0.50 34.44 ? 5 5BD B O4 1 HETATM 254 O O . HOH H 4 . ? 22.662 -10.008 11.223 0.50 106.39 ? 9 HOH A O 1 HETATM 255 O O . HOH H 4 . ? 20.842 -7.310 9.254 0.50 90.08 ? 10 HOH A O 1 HETATM 256 O O . HOH H 4 . ? 22.194 -9.420 9.153 0.50 105.39 ? 11 HOH A O 1 HETATM 257 O O . HOH H 4 . ? 20.696 -9.866 9.839 0.50 113.32 ? 12 HOH A O 1 HETATM 258 O O . HOH H 4 . ? 29.855 -5.746 14.952 1.00 76.78 ? 13 HOH A O 1 HETATM 259 O O . HOH H 4 . ? 13.138 -0.112 22.204 1.00 119.06 ? 14 HOH A O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 1 N N1 . BRU A 1 ? 0.6790 0.7741 0.7047 0.1410 0.0411 0.0220 1 BRU A N1 2 C C2 . BRU A 1 ? 0.6585 0.7058 0.6860 0.1389 0.0357 0.0076 1 BRU A C2 3 N N3 . BRU A 1 ? 0.6703 0.6794 0.6781 0.1377 0.0297 -0.0027 1 BRU A N3 4 C C4 . BRU A 1 ? 0.7066 0.7120 0.6914 0.1407 0.0288 -0.0013 1 BRU A C4 5 C C5 . BRU A 1 ? 0.7328 0.7815 0.7157 0.1473 0.0356 0.0114 1 BRU A C5 6 C C6 . BRU A 1 ? 0.7176 0.8152 0.7223 0.1460 0.0414 0.0235 1 BRU A C6 7 O O2 . BRU A 1 ? 0.6308 0.6783 0.6761 0.1331 0.0358 0.0058 1 BRU A O2 8 O O4 . BRU A 1 ? 0.7303 0.7035 0.6934 0.1332 0.0216 -0.0090 1 BRU A O4 9 BR BR . BRU A 1 ? 0.7908 0.8403 0.7449 0.1494 0.0354 0.0132 1 BRU A BR 10 C "C1'" . BRU A 1 ? 0.6741 0.8255 0.7176 0.1325 0.0455 0.0372 1 BRU A "C1'" 11 C "C2'" . BRU A 1 ? 0.6632 0.8152 0.7187 0.0948 0.0346 0.0510 1 BRU A "C2'" 12 C "C3'" . BRU A 1 ? 0.6925 0.9235 0.7466 0.0799 0.0391 0.0729 1 BRU A "C3'" 13 C "C4'" . BRU A 1 ? 0.7244 1.0082 0.7687 0.1189 0.0540 0.0703 1 BRU A "C4'" 14 O "O3'" . BRU A 1 ? 0.6698 0.9271 0.7374 0.0674 0.0404 0.0794 1 BRU A "O3'" 15 O "O4'" . BRU A 1 ? 0.7163 0.9341 0.7479 0.1504 0.0562 0.0475 1 BRU A "O4'" 16 C "C5'" . BRU A 1 ? 0.7734 1.0996 0.8017 0.1117 0.0549 0.0819 1 BRU A "C5'" 17 O "O5'" . BRU A 1 ? 0.7726 1.0287 0.7879 0.1101 0.0468 0.0709 1 BRU A "O5'" 18 P P . DA A 2 ? 0.6772 0.9059 0.7381 0.0186 0.0263 0.0910 2 DA A P 19 O OP1 . DA A 2 ? 0.6776 0.9639 0.7490 0.0060 0.0309 0.1020 2 DA A OP1 20 O OP2 . DA A 2 ? 0.7322 0.9509 0.7658 -0.0144 0.0140 0.1072 2 DA A OP2 21 O "O5'" . DA A 2 ? 0.6249 0.7617 0.6904 0.0302 0.0203 0.0678 2 DA A "O5'" 22 C "C5'" . DA A 2 ? 0.5529 0.6803 0.6366 0.0488 0.0270 0.0523 2 DA A "C5'" 23 C "C4'" . DA A 2 ? 0.5190 0.5792 0.6046 0.0533 0.0201 0.0338 2 DA A "C4'" 24 O "O4'" . DA A 2 ? 0.4931 0.5387 0.5806 0.0764 0.0207 0.0222 2 DA A "O4'" 25 C "C3'" . DA A 2 ? 0.5639 0.5715 0.6269 0.0339 0.0065 0.0373 2 DA A "C3'" 26 O "O3'" . DA A 2 ? 0.5606 0.5293 0.6257 0.0392 0.0045 0.0213 2 DA A "O3'" 27 C "C2'" . DA A 2 ? 0.5718 0.5594 0.6286 0.0492 0.0005 0.0354 2 DA A "C2'" 28 C "C1'" . DA A 2 ? 0.5024 0.5096 0.5822 0.0749 0.0098 0.0198 2 DA A "C1'" 29 N N9 . DA A 2 ? 0.5031 0.5148 0.5777 0.0869 0.0087 0.0197 2 DA A N9 30 C C8 . DA A 2 ? 0.5340 0.5537 0.5931 0.0804 0.0050 0.0332 2 DA A C8 31 N N7 . DA A 2 ? 0.5319 0.5524 0.5861 0.0922 0.0048 0.0288 2 DA A N7 32 C C5 . DA A 2 ? 0.5013 0.5131 0.5651 0.1033 0.0073 0.0127 2 DA A C5 33 C C6 . DA A 2 ? 0.5040 0.5101 0.5587 0.1090 0.0059 0.0032 2 DA A C6 34 N N6 . DA A 2 ? 0.5352 0.5407 0.5713 0.1091 0.0029 0.0069 2 DA A N6 35 N N1 . DA A 2 ? 0.4902 0.4920 0.5495 0.1076 0.0061 -0.0089 2 DA A N1 36 C C2 . DA A 2 ? 0.4640 0.4683 0.5406 0.1060 0.0094 -0.0129 2 DA A C2 37 N N3 . DA A 2 ? 0.4532 0.4595 0.5403 0.1037 0.0119 -0.0064 2 DA A N3 38 C C4 . DA A 2 ? 0.4795 0.4885 0.5576 0.1007 0.0100 0.0070 2 DA A C4 39 P P . DG A 3 ? 0.5990 0.5456 0.6449 0.0122 0.0013 0.0242 3 DG A P 40 O OP1 . DG A 3 ? 0.6886 0.5972 0.6878 -0.0199 -0.0125 0.0423 3 DG A OP1 41 O OP2 . DG A 3 ? 0.5901 0.5057 0.6420 0.0306 0.0026 0.0021 3 DG A OP2 42 O "O5'" . DG A 3 ? 0.5434 0.5620 0.6134 0.0026 0.0125 0.0339 3 DG A "O5'" 43 C "C5'" . DG A 3 ? 0.4804 0.5194 0.5770 0.0205 0.0218 0.0208 3 DG A "C5'" 44 C "C4'" . DG A 3 ? 0.4799 0.5337 0.5762 -0.0025 0.0232 0.0252 3 DG A "C4'" 45 O "O4'" . DG A 3 ? 0.5199 0.5151 0.5974 -0.0123 0.0176 0.0113 3 DG A "O4'" 46 C "C3'" . DG A 3 ? 0.5170 0.6143 0.5992 -0.0364 0.0203 0.0509 3 DG A "C3'" 47 O "O3'" . DG A 3 ? 0.4769 0.6294 0.5767 -0.0399 0.0263 0.0581 3 DG A "O3'" 48 C "C2'" . DG A 3 ? 0.6006 0.6288 0.6397 -0.0709 0.0078 0.0509 3 DG A "C2'" 49 C "C1'" . DG A 3 ? 0.5848 0.5721 0.6334 -0.0511 0.0117 0.0251 3 DG A "C1'" 50 N N9 . DG A 3 ? 0.6647 0.5681 0.6708 -0.0583 0.0032 0.0116 3 DG A N9 51 C C8 . DG A 3 ? 0.7295 0.5622 0.7041 -0.0396 -0.0054 0.0017 3 DG A C8 52 N N7 . DG A 3 ? 0.8175 0.5750 0.7453 -0.0413 -0.0117 -0.0116 3 DG A N7 53 C C5 . DG A 3 ? 0.8032 0.5860 0.7349 -0.0697 -0.0065 -0.0103 3 DG A C5 54 C C6 . DG A 3 ? 0.8817 0.6096 0.7695 -0.0860 -0.0089 -0.0221 3 DG A C6 55 O O6 . DG A 3 ? 0.9952 0.6297 0.8237 -0.0721 -0.0161 -0.0389 3 DG A O6 56 N N1 . DG A 3 ? 0.8313 0.6190 0.7425 -0.1178 -0.0026 -0.0132 3 DG A N1 57 C C2 . DG A 3 ? 0.7288 0.6152 0.6963 -0.1242 0.0046 0.0050 3 DG A C2 58 N N2 . DG A 3 ? 0.6994 0.6373 0.6819 -0.1497 0.0084 0.0142 3 DG A N2 59 N N3 . DG A 3 ? 0.6711 0.6009 0.6724 -0.1024 0.0075 0.0137 3 DG A N3 60 C C4 . DG A 3 ? 0.7077 0.5832 0.6899 -0.0799 0.0020 0.0054 3 DG A C4 61 P P . DG A 4 ? 0.4456 0.6859 0.5668 -0.0135 0.0354 0.0726 4 DG A P 62 O OP1 . DG A 4 ? 0.4818 0.7682 0.5948 -0.0190 0.0349 0.0904 4 DG A OP1 63 O OP2 . DG A 4 ? 0.4458 0.7353 0.5761 -0.0254 0.0369 0.0837 4 DG A OP2 64 O "O5'" . DG A 4 ? 0.3981 0.6004 0.5280 0.0324 0.0409 0.0509 4 DG A "O5'" 65 C "C5'" . DG A 4 ? 0.3596 0.5416 0.4945 0.0439 0.0423 0.0390 4 DG A "C5'" 66 C "C4'" . DG A 4 ? 0.3452 0.4780 0.4713 0.0711 0.0425 0.0207 4 DG A "C4'" 67 O "O4'" . DG A 4 ? 0.3362 0.4373 0.4606 0.0670 0.0395 0.0119 4 DG A "O4'" 68 C "C3'" . DG A 4 ? 0.3320 0.4282 0.4556 0.0650 0.0395 0.0059 4 DG A "C3'" 69 O "O3'" . DG A 4 ? 0.3711 0.4510 0.4718 0.0900 0.0387 0.0055 4 DG A "O3'" 70 C "C2'" . DG A 4 ? 0.3129 0.3725 0.4374 0.0583 0.0363 -0.0111 4 DG A "C2'" 71 C "C1'" . DG A 4 ? 0.3182 0.3794 0.4386 0.0716 0.0368 -0.0061 4 DG A "C1'" 72 N N9 . DG A 4 ? 0.3130 0.3542 0.4377 0.0660 0.0327 -0.0143 4 DG A N9 73 C C8 . DG A 4 ? 0.3154 0.3423 0.4457 0.0549 0.0299 -0.0234 4 DG A C8 74 N N7 . DG A 4 ? 0.3333 0.3434 0.4609 0.0636 0.0254 -0.0286 4 DG A N7 75 C C5 . DG A 4 ? 0.3307 0.3461 0.4538 0.0738 0.0250 -0.0217 4 DG A C5 76 C C6 . DG A 4 ? 0.3492 0.3554 0.4674 0.0841 0.0197 -0.0212 4 DG A C6 77 O O6 . DG A 4 ? 0.3744 0.3664 0.4920 0.0913 0.0135 -0.0261 4 DG A O6 78 N N1 . DG A 4 ? 0.3482 0.3625 0.4568 0.0907 0.0219 -0.0144 4 DG A N1 79 C C2 . DG A 4 ? 0.3485 0.3751 0.4486 0.0960 0.0286 -0.0101 4 DG A C2 80 N N2 . DG A 4 ? 0.3715 0.3987 0.4526 0.1099 0.0308 -0.0067 4 DG A N2 81 N N3 . DG A 4 ? 0.3395 0.3762 0.4443 0.0922 0.0325 -0.0091 4 DG A N3 82 C C4 . DG A 4 ? 0.3229 0.3550 0.4415 0.0769 0.0302 -0.0144 4 DG A C4 83 N N1 . BRU B 1 ? 0.5503 0.7111 0.6600 0.0738 -0.0202 -0.0347 1 BRU B N1 84 C C2 . BRU B 1 ? 0.5359 0.6474 0.6490 0.0966 -0.0151 -0.0318 1 BRU B C2 85 N N3 . BRU B 1 ? 0.5460 0.6308 0.6435 0.0995 -0.0176 -0.0230 1 BRU B N3 86 C C4 . BRU B 1 ? 0.5731 0.6681 0.6500 0.0845 -0.0244 -0.0185 1 BRU B C4 87 C C5 . BRU B 1 ? 0.6044 0.7420 0.6718 0.0576 -0.0312 -0.0209 1 BRU B C5 88 C C6 . BRU B 1 ? 0.5892 0.7627 0.6748 0.0521 -0.0290 -0.0282 1 BRU B C6 89 O O2 . BRU B 1 ? 0.5153 0.6108 0.6414 0.1088 -0.0091 -0.0362 1 BRU B O2 90 O O4 . BRU B 1 ? 0.5856 0.6572 0.6463 0.0873 -0.0258 -0.0111 1 BRU B O4 91 BR BR . BRU B 1 ? 0.6699 0.8158 0.7007 0.0285 -0.0420 -0.0139 1 BRU B BR 92 C "C1'" . BRU B 1 ? 0.5356 0.7364 0.6619 0.0674 -0.0170 -0.0435 1 BRU B "C1'" 93 C "C2'" . BRU B 1 ? 0.5227 0.6840 0.6183 0.0350 -0.0152 -0.0466 1 BRU B "C2'" 94 C "C3'" . BRU B 1 ? 0.5657 0.7775 0.6411 -0.0051 -0.0255 -0.0444 1 BRU B "C3'" 95 C "C4'" . BRU B 1 ? 0.5734 0.8867 0.6914 0.0136 -0.0271 -0.0436 1 BRU B "C4'" 96 O "O3'" . BRU B 1 ? 0.5684 0.7700 0.6239 -0.0351 -0.0260 -0.0486 1 BRU B "O3'" 97 O "O4'" . BRU B 1 ? 0.5616 0.8515 0.7002 0.0584 -0.0240 -0.0420 1 BRU B "O4'" 98 C "C5'" . BRU B 1 ? 0.6299 1.0168 0.7326 -0.0218 -0.0403 -0.0334 1 BRU B "C5'" 99 O "O5'" . BRU B 1 ? 0.6526 0.9927 0.7265 -0.0279 -0.0470 -0.0251 1 BRU B "O5'" 100 P P . DA B 2 ? 0.6185 0.7223 0.6031 -0.0651 -0.0327 -0.0468 2 DA B P 101 O OP1 . DA B 2 ? 0.6479 0.7558 0.6142 -0.0984 -0.0368 -0.0488 2 DA B OP1 102 O OP2 . DA B 2 ? 0.6920 0.7693 0.6263 -0.0883 -0.0444 -0.0403 2 DA B OP2 103 O "O5'" . DA B 2 ? 0.5695 0.6069 0.5629 -0.0224 -0.0205 -0.0494 2 DA B "O5'" 104 C "C5'" . DA B 2 ? 0.5122 0.5562 0.5419 -0.0028 -0.0101 -0.0534 2 DA B "C5'" 105 C "C4'" . DA B 2 ? 0.5198 0.4944 0.5212 0.0120 -0.0056 -0.0515 2 DA B "C4'" 106 O "O4'" . DA B 2 ? 0.5168 0.4697 0.5146 0.0392 -0.0009 -0.0473 2 DA B "O4'" 107 C "C3'" . DA B 2 ? 0.6017 0.5086 0.5312 -0.0107 -0.0160 -0.0511 2 DA B "C3'" 108 O "O3'" . DA B 2 ? 0.6022 0.4730 0.5210 0.0045 -0.0120 -0.0501 2 DA B "O3'" 109 C "C2'" . DA B 2 ? 0.6614 0.5172 0.5448 0.0014 -0.0188 -0.0496 2 DA B "C2'" 110 C "C1'" . DA B 2 ? 0.5920 0.4769 0.5262 0.0423 -0.0045 -0.0470 2 DA B "C1'" 111 N N9 . DA B 2 ? 0.6154 0.4868 0.5332 0.0584 -0.0030 -0.0448 2 DA B N9 112 C C8 . DA B 2 ? 0.6963 0.5236 0.5551 0.0444 -0.0120 -0.0465 2 DA B C8 113 N N7 . DA B 2 ? 0.7044 0.5323 0.5610 0.0637 -0.0073 -0.0443 2 DA B N7 114 C C5 . DA B 2 ? 0.6214 0.4978 0.5378 0.0889 0.0043 -0.0392 2 DA B C5 115 C C6 . DA B 2 ? 0.5990 0.5027 0.5376 0.1096 0.0120 -0.0325 2 DA B C6 116 N N6 . DA B 2 ? 0.6429 0.5321 0.5508 0.1141 0.0112 -0.0317 2 DA B N6 117 N N1 . DA B 2 ? 0.5380 0.4830 0.5240 0.1190 0.0189 -0.0254 2 DA B N1 118 C C2 . DA B 2 ? 0.5024 0.4581 0.5134 0.1124 0.0197 -0.0271 2 DA B C2 119 N N3 . DA B 2 ? 0.5090 0.4468 0.5087 0.0977 0.0148 -0.0346 2 DA B N3 120 C C4 . DA B 2 ? 0.5711 0.4705 0.5227 0.0851 0.0067 -0.0396 2 DA B C4 121 P P . DG B 3 ? 0.5842 0.4749 0.5169 -0.0175 -0.0136 -0.0511 3 DG B P 122 O OP1 . DG B 3 ? 0.6205 0.5424 0.5406 -0.0643 -0.0245 -0.0532 3 DG B OP1 123 O OP2 . DG B 3 ? 0.6307 0.4571 0.5207 -0.0016 -0.0157 -0.0467 3 DG B OP2 124 O "O5'" . DG B 3 ? 0.4849 0.4427 0.4943 0.0032 0.0008 -0.0528 3 DG B "O5'" 125 C "C5'" . DG B 3 ? 0.4378 0.4609 0.4904 -0.0057 0.0034 -0.0592 3 DG B "C5'" 126 C "C4'" . DG B 3 ? 0.4080 0.4608 0.4837 -0.0163 0.0077 -0.0639 3 DG B "C4'" 127 O "O4'" . DG B 3 ? 0.4151 0.4281 0.4747 -0.0136 0.0087 -0.0577 3 DG B "O4'" 128 C "C3'" . DG B 3 ? 0.4329 0.5248 0.4978 -0.0535 0.0007 -0.0684 3 DG B "C3'" 129 O "O3'" . DG B 3 ? 0.3914 0.5443 0.4965 -0.0484 0.0093 -0.0780 3 DG B "O3'" 130 C "C2'" . DG B 3 ? 0.4811 0.5162 0.5005 -0.0754 -0.0073 -0.0621 3 DG B "C2'" 131 C "C1'" . DG B 3 ? 0.4380 0.4601 0.4851 -0.0444 0.0035 -0.0600 3 DG B "C1'" 132 N N9 . DG B 3 ? 0.4723 0.4441 0.4869 -0.0435 -0.0010 -0.0512 3 DG B N9 133 C C8 . DG B 3 ? 0.5306 0.4369 0.4980 -0.0240 -0.0069 -0.0432 3 DG B C8 134 N N7 . DG B 3 ? 0.5656 0.4421 0.5100 -0.0184 -0.0107 -0.0354 3 DG B N7 135 C C5 . DG B 3 ? 0.5196 0.4457 0.5008 -0.0429 -0.0071 -0.0380 3 DG B C5 136 C C6 . DG B 3 ? 0.5265 0.4527 0.5046 -0.0520 -0.0096 -0.0310 3 DG B C6 137 O O6 . DG B 3 ? 0.5846 0.4682 0.5270 -0.0356 -0.0167 -0.0195 3 DG B O6 138 N N1 . DG B 3 ? 0.4754 0.4588 0.4925 -0.0792 -0.0034 -0.0389 3 DG B N1 139 C C2 . DG B 3 ? 0.4344 0.4678 0.4861 -0.0869 0.0046 -0.0527 3 DG B C2 140 N N2 . DG B 3 ? 0.4115 0.4913 0.4883 -0.1049 0.0108 -0.0613 3 DG B N2 141 N N3 . DG B 3 ? 0.4346 0.4722 0.4915 -0.0739 0.0060 -0.0577 3 DG B N3 142 C C4 . DG B 3 ? 0.4657 0.4485 0.4877 -0.0566 -0.0002 -0.0493 3 DG B C4 143 P P . DG B 4 ? 0.3808 0.6044 0.5197 -0.0265 0.0140 -0.0868 4 DG B P 144 O OP1 . DG B 4 ? 0.4142 0.6753 0.5376 -0.0482 0.0039 -0.0816 4 DG B OP1 145 O OP2 . DG B 4 ? 0.3770 0.6485 0.5377 -0.0205 0.0226 -0.0992 4 DG B OP2 146 O "O5'" . DG B 4 ? 0.3509 0.5304 0.5018 0.0132 0.0186 -0.0845 4 DG B "O5'" 147 C "C5'" . DG B 4 ? 0.3326 0.4904 0.4962 0.0360 0.0262 -0.0893 4 DG B "C5'" 148 C "C4'" . DG B 4 ? 0.3339 0.4570 0.4972 0.0627 0.0250 -0.0834 4 DG B "C4'" 149 O "O4'" . DG B 4 ? 0.3193 0.4147 0.4693 0.0549 0.0212 -0.0712 4 DG B "O4'" 150 C "C3'" . DG B 4 ? 0.3420 0.4191 0.4988 0.0726 0.0282 -0.0820 4 DG B "C3'" 151 O "O3'" . DG B 4 ? 0.3935 0.4524 0.5432 0.1008 0.0249 -0.0848 4 DG B "O3'" 152 C "C2'" . DG B 4 ? 0.3186 0.3667 0.4676 0.0614 0.0276 -0.0660 4 DG B "C2'" 153 C "C1'" . DG B 4 ? 0.3119 0.3691 0.4579 0.0650 0.0233 -0.0622 4 DG B "C1'" 154 N N9 . DG B 4 ? 0.3051 0.3432 0.4349 0.0587 0.0233 -0.0524 4 DG B N9 155 C C8 . DG B 4 ? 0.3005 0.3288 0.4208 0.0503 0.0254 -0.0480 4 DG B C8 156 N N7 . DG B 4 ? 0.3198 0.3270 0.4168 0.0593 0.0246 -0.0407 4 DG B N7 157 C C5 . DG B 4 ? 0.3284 0.3314 0.4202 0.0681 0.0224 -0.0407 4 DG B C5 158 C C6 . DG B 4 ? 0.3625 0.3421 0.4255 0.0811 0.0214 -0.0365 4 DG B C6 159 O O6 . DG B 4 ? 0.4017 0.3558 0.4334 0.0948 0.0229 -0.0330 4 DG B O6 160 N N1 . DG B 4 ? 0.3649 0.3509 0.4316 0.0825 0.0182 -0.0371 4 DG B N1 161 C C2 . DG B 4 ? 0.3462 0.3584 0.4403 0.0789 0.0153 -0.0404 4 DG B C2 162 N N2 . DG B 4 ? 0.3614 0.3789 0.4538 0.0841 0.0106 -0.0380 4 DG B N2 163 N N3 . DG B 4 ? 0.3283 0.3587 0.4447 0.0751 0.0167 -0.0460 4 DG B N3 164 C C4 . DG B 4 ? 0.3164 0.3408 0.4307 0.0666 0.0207 -0.0464 4 DG B C4 165 MG MG . MG C . ? 1.4739 1.0354 1.0609 -0.3886 -0.0451 0.0115 5 MG A MG 166 C C1 . 5BD D . ? 1.3640 1.6250 1.2400 -0.3864 -0.0395 0.1978 6 5BD A C1 167 C C2 . 5BD D . ? 1.3048 1.7226 1.2388 -0.3637 -0.0271 0.2179 6 5BD A C2 168 C C3 . 5BD D . ? 1.2560 1.7951 1.2379 -0.3496 -0.0164 0.2296 6 5BD A C3 169 C C5 . 5BD D . ? 1.3975 1.5371 1.2296 -0.4485 -0.0393 0.1582 6 5BD A C5 170 C C6 . 5BD D . ? 1.4845 1.4743 1.2471 -0.4602 -0.0466 0.1313 6 5BD A C6 171 C C7 . 5BD D . ? 1.5672 1.4295 1.2709 -0.4490 -0.0557 0.1155 6 5BD A C7 172 C C8 . 5BD D . ? 1.5509 1.4379 1.2691 -0.4349 -0.0581 0.1279 6 5BD A C8 173 C C9 . 5BD D . ? 1.2225 1.9739 1.2654 -0.2934 0.0013 0.2558 6 5BD A C9 174 C C11 . 5BD D . ? 1.3686 1.5951 1.2351 -0.4001 -0.0398 0.1878 6 5BD A C11 175 C C12 . 5BD D . ? 1.3088 1.6584 1.2266 -0.3948 -0.0296 0.2009 6 5BD A C12 176 C C13 . 5BD D . ? 1.3150 1.6341 1.2230 -0.4120 -0.0305 0.1923 6 5BD A C13 177 C C14 . 5BD D . ? 1.4459 1.5163 1.2473 -0.4147 -0.0504 0.1649 6 5BD A C14 178 O O1 . 5BD D . ? 1.2498 1.9239 1.2618 -0.3069 -0.0058 0.2494 6 5BD A O1 179 N N1 . 5BD D . ? 1.2211 1.9140 1.2527 -0.3147 -0.0039 0.2480 6 5BD A N1 180 C C4 . 5BD D . ? 1.2564 1.7593 1.2307 -0.3672 -0.0188 0.2222 6 5BD A C4 181 O O2 . 5BD D . ? 1.2683 1.6964 1.2203 -0.4057 -0.0233 0.2060 6 5BD A O2 182 O O3 . 5BD D . ? 1.5177 1.4744 1.2675 -0.4110 -0.0610 0.1539 6 5BD A O3 183 C C15 . 5BD D . ? 1.4567 1.4977 1.2461 -0.4286 -0.0494 0.1537 6 5BD A C15 184 C C16 . 5BD D . ? 1.3853 1.5520 1.2302 -0.4312 -0.0396 0.1681 6 5BD A C16 185 N N2 . 5BD D . ? 1.4957 1.4735 1.2480 -0.4778 -0.0446 0.1222 6 5BD A N2 186 C C10 . 5BD D . ? 1.5810 1.4378 1.2703 -0.4859 -0.0486 0.0968 6 5BD A C10 187 O O4 . 5BD D . ? 1.6761 1.4005 1.3001 -0.4723 -0.0556 0.0756 6 5BD A O4 188 C C1 . 5BD E . ? 1.1326 0.9919 0.9867 -0.2411 -0.0262 0.0643 7 5BD A C1 189 C C2 . 5BD E . ? 1.1871 0.9615 1.0079 -0.2171 -0.0340 0.0537 7 5BD A C2 190 C C3 . 5BD E . ? 1.1431 0.9599 0.9931 -0.1989 -0.0330 0.0646 7 5BD A C3 191 C C5 . 5BD E . ? 0.8666 1.2215 0.9273 -0.1852 0.0113 0.1418 7 5BD A C5 192 C C6 . 5BD E . ? 0.8529 1.2942 0.9381 -0.1851 0.0158 0.1556 7 5BD A C6 193 C C7 . 5BD E . ? 0.8710 1.2780 0.9399 -0.2198 0.0104 0.1522 7 5BD A C7 194 C C8 . 5BD E . ? 0.9120 1.1968 0.9366 -0.2479 0.0021 0.1326 7 5BD A C8 195 C C9 . 5BD E . ? 1.3000 0.9252 1.0608 -0.1604 -0.0526 0.0405 7 5BD A C9 196 C C11 . 5BD E . ? 1.0428 1.0288 0.9573 -0.2387 -0.0172 0.0854 7 5BD A C11 197 C C12 . 5BD E . ? 1.0063 1.0324 0.9459 -0.2153 -0.0147 0.0940 7 5BD A C12 198 C C13 . 5BD E . ? 0.9388 1.0877 0.9290 -0.2028 -0.0046 0.1123 7 5BD A C13 199 C C14 . 5BD E . ? 1.0026 1.0752 0.9477 -0.2548 -0.0110 0.0979 7 5BD A C14 200 O O1 . 5BD E . ? 1.3704 0.9297 1.0895 -0.1645 -0.0549 0.0254 7 5BD A O1 201 N N1 . 5BD E . ? 1.1967 0.9385 1.0165 -0.1760 -0.0420 0.0575 7 5BD A N1 202 C C4 . 5BD E . ? 1.0519 0.9936 0.9602 -0.2000 -0.0227 0.0838 7 5BD A C4 203 O O2 . 5BD E . ? 0.9172 1.0994 0.9237 -0.1803 -0.0014 0.1177 7 5BD A O2 204 O O3 . 5BD E . ? 1.0372 1.0751 0.9581 -0.2791 -0.0134 0.0906 7 5BD A O3 205 C C15 . 5BD E . ? 0.9374 1.1344 0.9348 -0.2395 -0.0024 0.1183 7 5BD A C15 206 C C16 . 5BD E . ? 0.9095 1.1434 0.9273 -0.2106 0.0015 0.1242 7 5BD A C16 207 N N2 . 5BD E . ? 0.8350 1.3912 0.9542 -0.1469 0.0251 0.1717 7 5BD A N2 208 C C10 . 5BD E . ? 0.8345 1.4811 0.9760 -0.1334 0.0289 0.1869 7 5BD A C10 209 O O4 . 5BD E . ? 0.8400 1.4857 0.9789 -0.1606 0.0244 0.1906 7 5BD A O4 210 C C1 . 5BD F . ? 0.6228 0.5485 0.6669 -0.0529 0.0273 -0.0490 8 5BD A C1 211 C C2 . 5BD F . ? 0.6518 0.5429 0.6856 -0.0225 0.0242 -0.0580 8 5BD A C2 212 C C3 . 5BD F . ? 0.6079 0.5229 0.6647 -0.0080 0.0230 -0.0470 8 5BD A C3 213 C C5 . 5BD F . ? 0.4559 0.6036 0.5925 -0.0380 0.0353 0.0252 8 5BD A C5 214 C C6 . 5BD F . ? 0.4603 0.6508 0.6027 -0.0474 0.0351 0.0385 8 5BD A C6 215 C C7 . 5BD F . ? 0.4719 0.6523 0.6069 -0.0810 0.0329 0.0346 8 5BD A C7 216 C C8 . 5BD F . ? 0.4910 0.6146 0.6078 -0.0984 0.0321 0.0153 8 5BD A C8 217 C C9 . 5BD F . ? 0.7140 0.5518 0.7320 0.0429 0.0146 -0.0687 8 5BD A C9 218 C C11 . 5BD F . ? 0.5571 0.5415 0.6330 -0.0610 0.0292 -0.0289 8 5BD A C11 219 C C12 . 5BD F . ? 0.5234 0.5271 0.6172 -0.0402 0.0291 -0.0204 8 5BD A C12 220 C C13 . 5BD F . ? 0.4830 0.5397 0.5979 -0.0374 0.0318 -0.0030 8 5BD A C13 221 C C14 . 5BD F . ? 0.5394 0.5623 0.6239 -0.0852 0.0308 -0.0178 8 5BD A C14 222 O O1 . 5BD F . ? 0.7751 0.5792 0.7641 0.0429 0.0157 -0.0827 8 5BD A O1 223 N N1 . 5BD F . ? 0.6380 0.5248 0.6859 0.0199 0.0185 -0.0531 8 5BD A N1 224 C C4 . 5BD F . ? 0.5435 0.5124 0.6284 -0.0180 0.0261 -0.0294 8 5BD A C4 225 O O2 . 5BD F . ? 0.4658 0.5349 0.5890 -0.0165 0.0326 0.0023 8 5BD A O2 226 O O3 . 5BD F . ? 0.5743 0.5793 0.6396 -0.1069 0.0307 -0.0256 8 5BD A O3 227 C C15 . 5BD F . ? 0.4972 0.5780 0.6066 -0.0806 0.0321 0.0020 8 5BD A C15 228 C C16 . 5BD F . ? 0.4740 0.5693 0.5961 -0.0534 0.0332 0.0081 8 5BD A C16 229 N N2 . 5BD F . ? 0.4656 0.7056 0.6155 -0.0188 0.0369 0.0545 8 5BD A N2 230 C C10 . 5BD F . ? 0.4812 0.7676 0.6352 -0.0154 0.0357 0.0698 8 5BD A C10 231 O O4 . 5BD F . ? 0.4845 0.7794 0.6390 -0.0458 0.0326 0.0730 8 5BD A O4 232 C C1 . 5BD G . ? 0.4502 0.4541 0.5555 0.0089 0.0423 -0.0978 5 5BD B C1 233 C C2 . 5BD G . ? 0.4869 0.4787 0.5864 0.0430 0.0405 -0.1073 5 5BD B C2 234 C C3 . 5BD G . ? 0.4570 0.4561 0.5708 0.0549 0.0362 -0.0966 5 5BD B C3 235 C C5 . 5BD G . ? 0.3129 0.3796 0.4535 -0.0017 0.0360 -0.0277 5 5BD B C5 236 C C6 . 5BD G . ? 0.3160 0.4021 0.4552 -0.0097 0.0354 -0.0155 5 5BD B C6 237 C C7 . 5BD G . ? 0.3197 0.4135 0.4601 -0.0353 0.0356 -0.0181 5 5BD B C7 238 C C8 . 5BD G . ? 0.3292 0.4064 0.4670 -0.0480 0.0376 -0.0354 5 5BD B C8 239 C C9 . 5BD G . ? 0.5685 0.5484 0.6594 0.1194 0.0327 -0.1182 5 5BD B C9 240 C C11 . 5BD G . ? 0.3926 0.4153 0.5155 -0.0052 0.0402 -0.0782 5 5BD B C11 241 C C12 . 5BD G . ? 0.3710 0.3960 0.5031 0.0111 0.0373 -0.0702 5 5BD B C12 242 C C13 . 5BD G . ? 0.3359 0.3746 0.4757 0.0066 0.0362 -0.0536 5 5BD B C13 243 C C14 . 5BD G . ? 0.3705 0.4095 0.4969 -0.0307 0.0407 -0.0669 5 5BD B C14 244 O O1 . 5BD G . ? 0.6200 0.5867 0.6906 0.1240 0.0372 -0.1330 5 5BD B O1 245 N N1 . 5BD G . ? 0.4947 0.4875 0.6041 0.0876 0.0327 -0.1025 5 5BD B N1 246 C C4 . 5BD G . ? 0.3980 0.4117 0.5269 0.0366 0.0352 -0.0790 5 5BD B C4 247 O O2 . 5BD G . ? 0.3272 0.3643 0.4687 0.0217 0.0343 -0.0484 5 5BD B O2 248 O O3 . 5BD G . ? 0.3923 0.4302 0.5086 -0.0491 0.0428 -0.0734 5 5BD B O3 249 C C15 . 5BD G . ? 0.3368 0.3935 0.4733 -0.0312 0.0385 -0.0484 5 5BD B C15 250 C C16 . 5BD G . ? 0.3239 0.3779 0.4645 -0.0103 0.0370 -0.0432 5 5BD B C16 251 N N2 . 5BD G . ? 0.3287 0.4254 0.4605 0.0125 0.0345 -0.0018 5 5BD B N2 252 C C10 . 5BD G . ? 0.3479 0.4653 0.4745 0.0184 0.0329 0.0118 5 5BD B C10 253 O O4 . 5BD G . ? 0.3480 0.4817 0.4790 -0.0028 0.0313 0.0161 5 5BD B O4 254 O O . HOH H . ? 1.7501 1.0911 1.2012 -0.3602 -0.0617 -0.0171 9 HOH A O 255 O O . HOH H . ? 1.3609 1.0527 1.0088 -0.4266 -0.0343 0.0244 10 HOH A O 256 O O . HOH H . ? 1.7094 1.1169 1.1780 -0.4040 -0.0496 -0.0230 11 HOH A O 257 O O . HOH H . ? 1.8155 1.2469 1.2433 -0.4908 -0.0714 0.0255 12 HOH A O 258 O O . HOH H . ? 1.1099 0.8044 1.0032 0.0556 0.0156 -0.1185 13 HOH A O 259 O O . HOH H . ? 1.1313 2.1246 1.2677 -0.1451 0.0374 0.2619 14 HOH A O #
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