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STRUCTURAL BIOLOGY
COMMUNICATIONS
Volume 81
|
Part 3
|
March 2025
|
https://doi.org/10.1107/S2053230X25000810
Open
access
ISSN: 2053-230X
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STRUCTURAL BIOLOGY
COMMUNICATIONS
Volume 81
|
Part 3
|
March 2025
|
https://doi.org/10.1107/S2053230X25000810
Open
access
ISSN: 2053-230X
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data_9K7R # _entry.id 9K7R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9K7R pdb_00009k7r 10.2210/pdb9k7r/pdb WWPDB D_1300052940 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-02-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9K7R _pdbx_database_status.recvd_initial_deposition_date 2024-10-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email j.kondo@sophia.ac.jp _pdbx_contact_author.name_first Jiro _pdbx_contact_author.name_last Kondo _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5682-3685 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kondo, J.' 1 0000-0002-5682-3685 'Ando, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_id_ASTM ACSFEN _citation.journal_id_CSD ? _citation.journal_id_ISSN 2053-230X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The first report of structural analysis of a nucleic acid using crystals grown in space.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2053230X25000810 _citation.pdbx_database_id_PubMed 39937045 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ando, S.' 1 ? primary 'Takahashi, M.' 2 ? primary 'Kondo, J.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*GP*AP*AP*GP*AP*AP*GP*AP*G)-3') ; 2981.895 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*(5CM)P*TP*CP*TP*TP*CP*TP*TP*(5CM))-3') ; 2660.788 1 ? ? ? ? 3 non-polymer syn SPERMINE 202.340 1 ? ? ? ? 4 water nat water 18.015 69 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GAAGAAGAG GAAGAAGAG A ? 2 polydeoxyribonucleotide no yes '(5CM)(DT)(DC)(DT)(DT)(DC)(DT)(DT)(5CM)' CTCTTCTTC B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 SPERMINE SPM 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 A n 1 4 G n 1 5 A n 1 6 A n 1 7 G n 1 8 A n 1 9 G n 2 1 5CM n 2 2 DT n 2 3 DC n 2 4 DT n 2 5 DT n 2 6 DC n 2 7 DT n 2 8 DT n 2 9 5CM n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'synthetic construct' ? 32630 ? 2 1 sample 1 9 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 SPM non-polymer . SPERMINE ? 'C10 H26 N4' 202.340 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 A 2 2 2 A A A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 A 5 5 5 A A A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 A 8 8 8 A A A . n A 1 9 G 9 9 9 G G A . n B 2 1 5CM 1 1 1 5CM 5CM B . n B 2 2 DT 2 2 2 DT DT B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 5CM 9 9 9 5CM 5CM B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SPM 1 101 101 SPM SPM A . D 4 HOH 1 201 17 HOH HOH A . D 4 HOH 2 202 26 HOH HOH A . D 4 HOH 3 203 61 HOH HOH A . D 4 HOH 4 204 11 HOH HOH A . D 4 HOH 5 205 71 HOH HOH A . D 4 HOH 6 206 40 HOH HOH A . D 4 HOH 7 207 6 HOH HOH A . D 4 HOH 8 208 37 HOH HOH A . D 4 HOH 9 209 70 HOH HOH A . D 4 HOH 10 210 18 HOH HOH A . D 4 HOH 11 211 3 HOH HOH A . D 4 HOH 12 212 31 HOH HOH A . D 4 HOH 13 213 36 HOH HOH A . D 4 HOH 14 214 2 HOH HOH A . D 4 HOH 15 215 29 HOH HOH A . D 4 HOH 16 216 4 HOH HOH A . D 4 HOH 17 217 35 HOH HOH A . D 4 HOH 18 218 56 HOH HOH A . D 4 HOH 19 219 74 HOH HOH A . D 4 HOH 20 220 55 HOH HOH A . D 4 HOH 21 221 68 HOH HOH A . D 4 HOH 22 222 23 HOH HOH A . D 4 HOH 23 223 76 HOH HOH A . D 4 HOH 24 224 53 HOH HOH A . D 4 HOH 25 225 60 HOH HOH A . D 4 HOH 26 226 44 HOH HOH A . D 4 HOH 27 227 65 HOH HOH A . D 4 HOH 28 228 52 HOH HOH A . D 4 HOH 29 229 50 HOH HOH A . D 4 HOH 30 230 75 HOH HOH A . D 4 HOH 31 231 69 HOH HOH A . E 4 HOH 1 101 30 HOH HOH B . E 4 HOH 2 102 33 HOH HOH B . E 4 HOH 3 103 24 HOH HOH B . E 4 HOH 4 104 66 HOH HOH B . E 4 HOH 5 105 45 HOH HOH B . E 4 HOH 6 106 20 HOH HOH B . E 4 HOH 7 107 13 HOH HOH B . E 4 HOH 8 108 1 HOH HOH B . E 4 HOH 9 109 39 HOH HOH B . E 4 HOH 10 110 7 HOH HOH B . E 4 HOH 11 111 12 HOH HOH B . E 4 HOH 12 112 72 HOH HOH B . E 4 HOH 13 113 15 HOH HOH B . E 4 HOH 14 114 41 HOH HOH B . E 4 HOH 15 115 42 HOH HOH B . E 4 HOH 16 116 62 HOH HOH B . E 4 HOH 17 117 22 HOH HOH B . E 4 HOH 18 118 8 HOH HOH B . E 4 HOH 19 119 51 HOH HOH B . E 4 HOH 20 120 67 HOH HOH B . E 4 HOH 21 121 34 HOH HOH B . E 4 HOH 22 122 48 HOH HOH B . E 4 HOH 23 123 43 HOH HOH B . E 4 HOH 24 124 63 HOH HOH B . E 4 HOH 25 125 16 HOH HOH B . E 4 HOH 26 126 49 HOH HOH B . E 4 HOH 27 127 28 HOH HOH B . E 4 HOH 28 128 32 HOH HOH B . E 4 HOH 29 129 9 HOH HOH B . E 4 HOH 30 130 21 HOH HOH B . E 4 HOH 31 131 73 HOH HOH B . E 4 HOH 32 132 14 HOH HOH B . E 4 HOH 33 133 10 HOH HOH B . E 4 HOH 34 134 47 HOH HOH B . E 4 HOH 35 135 64 HOH HOH B . E 4 HOH 36 136 57 HOH HOH B . E 4 HOH 37 137 58 HOH HOH B . E 4 HOH 38 138 59 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.20.1_4487: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 9K7R _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.472 _cell.length_a_esd ? _cell.length_b 48.472 _cell.length_b_esd ? _cell.length_c 45.555 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9K7R _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9K7R _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method COUNTER-DIFFUSION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'potassium chloride, MPD, spermine, MES' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-06-25 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.98 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9K7R _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.59 _reflns.d_resolution_low 24.24 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8199 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.36 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.039 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.035 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.60 1.7 ? ? ? ? ? ? 1353 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.433 ? ? 1 1 0.924 ? ? ? ? 0.386 ? ? ? ? ? ? ? ? ? 1.70 1.8 ? ? ? ? ? ? 1046 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.269 ? ? 2 1 0.96 ? ? ? ? 0.237 ? ? ? ? ? ? ? ? ? 1.80 1.9 ? ? ? ? ? ? 850 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.181 ? ? 3 1 0.981 ? ? ? ? 0.16 ? ? ? ? ? ? ? ? ? 1.90 2.0 ? ? ? ? ? ? 690 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.129 ? ? 4 1 0.99 ? ? ? ? 0.115 ? ? ? ? ? ? ? ? ? 2.00 3.0 ? ? ? ? ? ? 2919 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.052 ? ? 5 1 0.999 ? ? ? ? 0.047 ? ? ? ? ? ? ? ? ? 3.00 4.0 ? ? ? ? ? ? 719 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.029 ? ? 6 1 0.999 ? ? ? ? 0.026 ? ? ? ? ? ? ? ? ? 4.00 5.0 ? ? ? ? ? ? 254 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.028 ? ? 7 1 0.999 ? ? ? ? 0.025 ? ? ? ? ? ? ? ? ? 5.00 24.24 ? ? ? ? ? ? 280 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.026 ? ? 8 1 0.999 ? ? ? ? 0.023 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9K7R _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.59 _refine.ls_d_res_low 24.24 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8199 _refine.ls_number_reflns_R_free 814 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.62 _refine.ls_percent_reflns_R_free 9.93 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1823 _refine.ls_R_factor_R_free 0.1961 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1807 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.92 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.14 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 374 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 69 _refine_hist.number_atoms_total 457 _refine_hist.d_res_high 1.59 _refine_hist.d_res_low 24.24 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? ? ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.043 ? ? ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 10.562 ? 189 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.039 ? 78 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 18 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.59 1.69 . . 130 1215 98.00 . . . . 0.2413 . . . . . . . . . . . 0.2511 'X-RAY DIFFRACTION' 1.69 1.82 . . 137 1219 100.00 . . . . 0.1904 . . . . . . . . . . . 0.2318 'X-RAY DIFFRACTION' 1.82 2.01 . . 135 1236 100.00 . . . . 0.2267 . . . . . . . . . . . 0.2211 'X-RAY DIFFRACTION' 2.01 2.30 . . 133 1232 100.00 . . . . 0.2189 . . . . . . . . . . . 0.2488 'X-RAY DIFFRACTION' 2.30 2.89 . . 140 1232 100.00 . . . . 0.2204 . . . . . . . . . . . 0.2400 'X-RAY DIFFRACTION' 2.89 24.24 . . 139 1251 100.00 . . . . 0.1434 . . . . . . . . . . . 0.1528 # _struct.entry_id 9K7R _struct.title 'Crystal structure of DNA/RNA duplex obtained using the counter diffusion method on Earth' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9K7R _struct_keywords.text 'counter diffusion method, RNA-DNA complex' _struct_keywords.pdbx_keywords RNA/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 9K7R 9K7R ? 1 ? 1 2 PDB 9K7R 9K7R ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9K7R A 1 ? 9 ? 9K7R 1 ? 9 ? 1 9 2 2 9K7R B 1 ? 9 ? 9K7R 1 ? 9 ? 1 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1700 ? 1 MORE 0 ? 1 'SSA (A^2)' 3470 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B 5CM 1 "O3'" ? ? ? 1_555 B DT 2 P ? ? B 5CM 1 B DT 2 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale2 covale both ? B DT 8 "O3'" ? ? ? 1_555 B 5CM 9 P ? ? B DT 8 B 5CM 9 1_555 ? ? ? ? ? ? ? 1.601 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B 5CM 9 N3 ? ? A G 1 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B 5CM 9 O2 ? ? A G 1 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B 5CM 9 N4 ? ? A G 1 B 5CM 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 B DT 8 N3 ? ? A A 2 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 B DT 8 O4 ? ? A A 2 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N1 ? ? ? 1_555 B DT 7 N3 ? ? A A 3 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N6 ? ? ? 1_555 B DT 7 O4 ? ? A A 3 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 4 N1 ? ? ? 1_555 B DC 6 N3 ? ? A G 4 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N2 ? ? ? 1_555 B DC 6 O2 ? ? A G 4 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 O6 ? ? ? 1_555 B DC 6 N4 ? ? A G 4 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 5 N1 ? ? ? 1_555 B DT 5 N3 ? ? A A 5 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N6 ? ? ? 1_555 B DT 5 O4 ? ? A A 5 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 6 N1 ? ? ? 1_555 B DT 4 N3 ? ? A A 6 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N6 ? ? ? 1_555 B DT 4 O4 ? ? A A 6 B DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 7 N1 ? ? ? 1_555 B DC 3 N3 ? ? A G 7 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N2 ? ? ? 1_555 B DC 3 O2 ? ? A G 7 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 O6 ? ? ? 1_555 B DC 3 N4 ? ? A G 7 B DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 8 N1 ? ? ? 1_555 B DT 2 N3 ? ? A A 8 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 8 N6 ? ? ? 1_555 B DT 2 O4 ? ? A A 8 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 9 N1 ? ? ? 1_555 B 5CM 1 N3 ? ? A G 9 B 5CM 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 9 N2 ? ? ? 1_555 B 5CM 1 O2 ? ? A G 9 B 5CM 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 O6 ? ? ? 1_555 B 5CM 1 N4 ? ? A G 9 B 5CM 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _pdbx_entry_details.entry_id 9K7R _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 A OP3 O N N 38 A P P N N 39 A OP1 O N N 40 A OP2 O N N 41 A "O5'" O N N 42 A "C5'" C N N 43 A "C4'" C N R 44 A "O4'" O N N 45 A "C3'" C N S 46 A "O3'" O N N 47 A "C2'" C N R 48 A "O2'" O N N 49 A "C1'" C N R 50 A N9 N Y N 51 A C8 C Y N 52 A N7 N Y N 53 A C5 C Y N 54 A C6 C Y N 55 A N6 N N N 56 A N1 N Y N 57 A C2 C Y N 58 A N3 N Y N 59 A C4 C Y N 60 A HOP3 H N N 61 A HOP2 H N N 62 A "H5'" H N N 63 A "H5''" H N N 64 A "H4'" H N N 65 A "H3'" H N N 66 A "HO3'" H N N 67 A "H2'" H N N 68 A "HO2'" H N N 69 A "H1'" H N N 70 A H8 H N N 71 A H61 H N N 72 A H62 H N N 73 A H2 H N N 74 DC OP3 O N N 75 DC P P N N 76 DC OP1 O N N 77 DC OP2 O N N 78 DC "O5'" O N N 79 DC "C5'" C N N 80 DC "C4'" C N R 81 DC "O4'" O N N 82 DC "C3'" C N S 83 DC "O3'" O N N 84 DC "C2'" C N N 85 DC "C1'" C N R 86 DC N1 N N N 87 DC C2 C N N 88 DC O2 O N N 89 DC N3 N N N 90 DC C4 C N N 91 DC N4 N N N 92 DC C5 C N N 93 DC C6 C N N 94 DC HOP3 H N N 95 DC HOP2 H N N 96 DC "H5'" H N N 97 DC "H5''" H N N 98 DC "H4'" H N N 99 DC "H3'" H N N 100 DC "HO3'" H N N 101 DC "H2'" H N N 102 DC "H2''" H N N 103 DC "H1'" H N N 104 DC H41 H N N 105 DC H42 H N N 106 DC H5 H N N 107 DC H6 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 G OP3 O N N 145 G P P N N 146 G OP1 O N N 147 G OP2 O N N 148 G "O5'" O N N 149 G "C5'" C N N 150 G "C4'" C N R 151 G "O4'" O N N 152 G "C3'" C N S 153 G "O3'" O N N 154 G "C2'" C N R 155 G "O2'" O N N 156 G "C1'" C N R 157 G N9 N Y N 158 G C8 C Y N 159 G N7 N Y N 160 G C5 C Y N 161 G C6 C N N 162 G O6 O N N 163 G N1 N N N 164 G C2 C N N 165 G N2 N N N 166 G N3 N N N 167 G C4 C Y N 168 G HOP3 H N N 169 G HOP2 H N N 170 G "H5'" H N N 171 G "H5''" H N N 172 G "H4'" H N N 173 G "H3'" H N N 174 G "HO3'" H N N 175 G "H2'" H N N 176 G "HO2'" H N N 177 G "H1'" H N N 178 G H8 H N N 179 G H1 H N N 180 G H21 H N N 181 G H22 H N N 182 HOH O O N N 183 HOH H1 H N N 184 HOH H2 H N N 185 SPM N1 N N N 186 SPM C2 C N N 187 SPM C3 C N N 188 SPM C4 C N N 189 SPM N5 N N N 190 SPM C6 C N N 191 SPM C7 C N N 192 SPM C8 C N N 193 SPM C9 C N N 194 SPM N10 N N N 195 SPM C11 C N N 196 SPM C12 C N N 197 SPM C13 C N N 198 SPM N14 N N N 199 SPM HN11 H N N 200 SPM HN12 H N N 201 SPM H21 H N N 202 SPM H22 H N N 203 SPM H31 H N N 204 SPM H32 H N N 205 SPM H41 H N N 206 SPM H42 H N N 207 SPM HN5 H N N 208 SPM H61 H N N 209 SPM H62 H N N 210 SPM H71 H N N 211 SPM H72 H N N 212 SPM H81 H N N 213 SPM H82 H N N 214 SPM H91 H N N 215 SPM H92 H N N 216 SPM HN0 H N N 217 SPM H111 H N N 218 SPM H112 H N N 219 SPM H121 H N N 220 SPM H122 H N N 221 SPM H131 H N N 222 SPM H132 H N N 223 SPM HN41 H N N 224 SPM HN42 H N N 225 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 A OP3 P sing N N 39 A OP3 HOP3 sing N N 40 A P OP1 doub N N 41 A P OP2 sing N N 42 A P "O5'" sing N N 43 A OP2 HOP2 sing N N 44 A "O5'" "C5'" sing N N 45 A "C5'" "C4'" sing N N 46 A "C5'" "H5'" sing N N 47 A "C5'" "H5''" sing N N 48 A "C4'" "O4'" sing N N 49 A "C4'" "C3'" sing N N 50 A "C4'" "H4'" sing N N 51 A "O4'" "C1'" sing N N 52 A "C3'" "O3'" sing N N 53 A "C3'" "C2'" sing N N 54 A "C3'" "H3'" sing N N 55 A "O3'" "HO3'" sing N N 56 A "C2'" "O2'" sing N N 57 A "C2'" "C1'" sing N N 58 A "C2'" "H2'" sing N N 59 A "O2'" "HO2'" sing N N 60 A "C1'" N9 sing N N 61 A "C1'" "H1'" sing N N 62 A N9 C8 sing Y N 63 A N9 C4 sing Y N 64 A C8 N7 doub Y N 65 A C8 H8 sing N N 66 A N7 C5 sing Y N 67 A C5 C6 sing Y N 68 A C5 C4 doub Y N 69 A C6 N6 sing N N 70 A C6 N1 doub Y N 71 A N6 H61 sing N N 72 A N6 H62 sing N N 73 A N1 C2 sing Y N 74 A C2 N3 doub Y N 75 A C2 H2 sing N N 76 A N3 C4 sing Y N 77 DC OP3 P sing N N 78 DC OP3 HOP3 sing N N 79 DC P OP1 doub N N 80 DC P OP2 sing N N 81 DC P "O5'" sing N N 82 DC OP2 HOP2 sing N N 83 DC "O5'" "C5'" sing N N 84 DC "C5'" "C4'" sing N N 85 DC "C5'" "H5'" sing N N 86 DC "C5'" "H5''" sing N N 87 DC "C4'" "O4'" sing N N 88 DC "C4'" "C3'" sing N N 89 DC "C4'" "H4'" sing N N 90 DC "O4'" "C1'" sing N N 91 DC "C3'" "O3'" sing N N 92 DC "C3'" "C2'" sing N N 93 DC "C3'" "H3'" sing N N 94 DC "O3'" "HO3'" sing N N 95 DC "C2'" "C1'" sing N N 96 DC "C2'" "H2'" sing N N 97 DC "C2'" "H2''" sing N N 98 DC "C1'" N1 sing N N 99 DC "C1'" "H1'" sing N N 100 DC N1 C2 sing N N 101 DC N1 C6 sing N N 102 DC C2 O2 doub N N 103 DC C2 N3 sing N N 104 DC N3 C4 doub N N 105 DC C4 N4 sing N N 106 DC C4 C5 sing N N 107 DC N4 H41 sing N N 108 DC N4 H42 sing N N 109 DC C5 C6 doub N N 110 DC C5 H5 sing N N 111 DC C6 H6 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 G OP3 P sing N N 150 G OP3 HOP3 sing N N 151 G P OP1 doub N N 152 G P OP2 sing N N 153 G P "O5'" sing N N 154 G OP2 HOP2 sing N N 155 G "O5'" "C5'" sing N N 156 G "C5'" "C4'" sing N N 157 G "C5'" "H5'" sing N N 158 G "C5'" "H5''" sing N N 159 G "C4'" "O4'" sing N N 160 G "C4'" "C3'" sing N N 161 G "C4'" "H4'" sing N N 162 G "O4'" "C1'" sing N N 163 G "C3'" "O3'" sing N N 164 G "C3'" "C2'" sing N N 165 G "C3'" "H3'" sing N N 166 G "O3'" "HO3'" sing N N 167 G "C2'" "O2'" sing N N 168 G "C2'" "C1'" sing N N 169 G "C2'" "H2'" sing N N 170 G "O2'" "HO2'" sing N N 171 G "C1'" N9 sing N N 172 G "C1'" "H1'" sing N N 173 G N9 C8 sing Y N 174 G N9 C4 sing Y N 175 G C8 N7 doub Y N 176 G C8 H8 sing N N 177 G N7 C5 sing Y N 178 G C5 C6 sing N N 179 G C5 C4 doub Y N 180 G C6 O6 doub N N 181 G C6 N1 sing N N 182 G N1 C2 sing N N 183 G N1 H1 sing N N 184 G C2 N2 sing N N 185 G C2 N3 doub N N 186 G N2 H21 sing N N 187 G N2 H22 sing N N 188 G N3 C4 sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 SPM N1 C2 sing N N 192 SPM N1 HN11 sing N N 193 SPM N1 HN12 sing N N 194 SPM C2 C3 sing N N 195 SPM C2 H21 sing N N 196 SPM C2 H22 sing N N 197 SPM C3 C4 sing N N 198 SPM C3 H31 sing N N 199 SPM C3 H32 sing N N 200 SPM C4 N5 sing N N 201 SPM C4 H41 sing N N 202 SPM C4 H42 sing N N 203 SPM N5 C6 sing N N 204 SPM N5 HN5 sing N N 205 SPM C6 C7 sing N N 206 SPM C6 H61 sing N N 207 SPM C6 H62 sing N N 208 SPM C7 C8 sing N N 209 SPM C7 H71 sing N N 210 SPM C7 H72 sing N N 211 SPM C8 C9 sing N N 212 SPM C8 H81 sing N N 213 SPM C8 H82 sing N N 214 SPM C9 N10 sing N N 215 SPM C9 H91 sing N N 216 SPM C9 H92 sing N N 217 SPM N10 C11 sing N N 218 SPM N10 HN0 sing N N 219 SPM C11 C12 sing N N 220 SPM C11 H111 sing N N 221 SPM C11 H112 sing N N 222 SPM C12 C13 sing N N 223 SPM C12 H121 sing N N 224 SPM C12 H122 sing N N 225 SPM C13 N14 sing N N 226 SPM C13 H131 sing N N 227 SPM C13 H132 sing N N 228 SPM N14 HN41 sing N N 229 SPM N14 HN42 sing N N 230 # _ndb_struct_conf_na.entry_id 9K7R _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B 5CM 9 1_555 -0.314 -0.152 -0.111 -7.619 -12.482 0.379 1 A_G1:5CM9_B A 1 ? B 9 ? 19 1 1 A A 2 1_555 B DT 8 1_555 0.011 -0.178 0.001 -3.974 -16.514 2.692 2 A_A2:DT8_B A 2 ? B 8 ? 20 1 1 A A 3 1_555 B DT 7 1_555 -0.001 -0.106 0.040 -5.567 -20.089 6.135 3 A_A3:DT7_B A 3 ? B 7 ? 20 1 1 A G 4 1_555 B DC 6 1_555 -0.212 -0.225 -0.112 -11.266 -10.320 -1.801 4 A_G4:DC6_B A 4 ? B 6 ? 19 1 1 A A 5 1_555 B DT 5 1_555 0.118 -0.093 -0.253 -11.255 -6.466 -4.594 5 A_A5:DT5_B A 5 ? B 5 ? 20 1 1 A A 6 1_555 B DT 4 1_555 0.025 -0.254 0.110 -1.320 -7.558 2.997 6 A_A6:DT4_B A 6 ? B 4 ? 20 1 1 A G 7 1_555 B DC 3 1_555 -0.002 0.008 0.019 -3.630 -11.253 2.379 7 A_G7:DC3_B A 7 ? B 3 ? 19 1 1 A A 8 1_555 B DT 2 1_555 -0.043 -0.231 -0.027 -0.497 -3.238 -1.966 8 A_A8:DT2_B A 8 ? B 2 ? 20 1 1 A G 9 1_555 B 5CM 1 1_555 -0.129 -0.137 0.030 7.962 -0.270 0.406 9 A_G9:5CM1_B A 9 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B 5CM 9 1_555 A A 2 1_555 B DT 8 1_555 0.428 -1.180 3.175 0.876 1.660 35.795 -2.147 -0.575 3.128 2.698 -1.424 35.843 1 AA_G1A2:DT85CM9_BB A 1 ? B 9 ? A 2 ? B 8 ? 1 A A 2 1_555 B DT 8 1_555 A A 3 1_555 B DT 7 1_555 0.361 -1.181 3.296 0.315 3.915 32.956 -2.716 -0.580 3.142 6.871 -0.552 33.183 2 AA_A2A3:DT7DT8_BB A 2 ? B 8 ? A 3 ? B 7 ? 1 A A 3 1_555 B DT 7 1_555 A G 4 1_555 B DC 6 1_555 -1.293 -1.314 3.298 -3.389 11.298 35.819 -3.457 1.577 2.874 17.785 5.335 37.651 3 AA_A3G4:DC6DT7_BB A 3 ? B 7 ? A 4 ? B 6 ? 1 A G 4 1_555 B DC 6 1_555 A A 5 1_555 B DT 5 1_555 0.823 -1.795 3.349 5.288 12.895 30.055 -5.203 -0.607 2.497 23.353 -9.576 33.062 4 AA_G4A5:DT5DC6_BB A 4 ? B 6 ? A 5 ? B 5 ? 1 A A 5 1_555 B DT 5 1_555 A A 6 1_555 B DT 4 1_555 0.786 -1.579 3.129 -0.357 2.202 25.586 -4.133 -1.863 2.974 4.961 0.803 25.682 5 AA_A5A6:DT4DT5_BB A 5 ? B 5 ? A 6 ? B 4 ? 1 A A 6 1_555 B DT 4 1_555 A G 7 1_555 B DC 3 1_555 0.181 -1.584 3.386 0.081 3.777 31.921 -3.543 -0.313 3.183 6.837 -0.147 32.137 6 AA_A6G7:DC3DT4_BB A 6 ? B 4 ? A 7 ? B 3 ? 1 A G 7 1_555 B DC 3 1_555 A A 8 1_555 B DT 2 1_555 -1.046 -1.420 3.141 -0.948 7.998 34.514 -3.414 1.591 2.780 13.258 1.571 35.414 7 AA_G7A8:DT2DC3_BB A 7 ? B 3 ? A 8 ? B 2 ? 1 A A 8 1_555 B DT 2 1_555 A G 9 1_555 B 5CM 1 1_555 0.696 -1.906 3.111 0.690 0.963 27.635 -4.207 -1.298 3.061 2.015 -1.444 27.659 8 AA_A8G9:5CM1DT2_BB A 8 ? B 2 ? A 9 ? B 1 ? # _pdbx_audit_support.funding_organization 'Japan Agency for Medical Research and Development (AMED)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number JP23ama121014 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4U6M _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9K7R _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.020630 _atom_sites.fract_transf_matrix[1][2] 0.011911 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023822 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021951 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . G A 1 1 ? -14.804 -10.559 -4.830 1.00 34.57 ? 1 G A "O5'" 1 ATOM 2 C "C5'" . G A 1 1 ? -14.976 -11.924 -5.174 1.00 31.84 ? 1 G A "C5'" 1 ATOM 3 C "C4'" . G A 1 1 ? -15.466 -12.728 -3.996 1.00 30.84 ? 1 G A "C4'" 1 ATOM 4 O "O4'" . G A 1 1 ? -14.457 -12.755 -2.957 1.00 29.79 ? 1 G A "O4'" 1 ATOM 5 C "C3'" . G A 1 1 ? -16.699 -12.190 -3.291 1.00 29.77 ? 1 G A "C3'" 1 ATOM 6 O "O3'" . G A 1 1 ? -17.896 -12.528 -3.955 1.00 29.39 ? 1 G A "O3'" 1 ATOM 7 C "C2'" . G A 1 1 ? -16.588 -12.808 -1.905 1.00 27.74 ? 1 G A "C2'" 1 ATOM 8 O "O2'" . G A 1 1 ? -17.033 -14.155 -1.917 1.00 28.99 ? 1 G A "O2'" 1 ATOM 9 C "C1'" . G A 1 1 ? -15.077 -12.793 -1.687 1.00 27.49 ? 1 G A "C1'" 1 ATOM 10 N N9 . G A 1 1 ? -14.650 -11.610 -0.927 1.00 26.55 ? 1 G A N9 1 ATOM 11 C C8 . G A 1 1 ? -13.934 -10.543 -1.396 1.00 26.50 ? 1 G A C8 1 ATOM 12 N N7 . G A 1 1 ? -13.698 -9.641 -0.480 1.00 26.98 ? 1 G A N7 1 ATOM 13 C C5 . G A 1 1 ? -14.291 -10.155 0.667 1.00 24.84 ? 1 G A C5 1 ATOM 14 C C6 . G A 1 1 ? -14.368 -9.619 1.978 1.00 24.84 ? 1 G A C6 1 ATOM 15 O O6 . G A 1 1 ? -13.909 -8.566 2.424 1.00 24.54 ? 1 G A O6 1 ATOM 16 N N1 . G A 1 1 ? -15.069 -10.473 2.818 1.00 22.85 ? 1 G A N1 1 ATOM 17 C C2 . G A 1 1 ? -15.633 -11.667 2.455 1.00 21.43 ? 1 G A C2 1 ATOM 18 N N2 . G A 1 1 ? -16.266 -12.325 3.428 1.00 21.96 ? 1 G A N2 1 ATOM 19 N N3 . G A 1 1 ? -15.575 -12.182 1.242 1.00 24.46 ? 1 G A N3 1 ATOM 20 C C4 . G A 1 1 ? -14.889 -11.370 0.407 1.00 24.82 ? 1 G A C4 1 ATOM 21 P P . A A 1 2 ? -19.114 -11.492 -3.988 1.00 30.24 ? 2 A A P 1 ATOM 22 O OP1 . A A 1 2 ? -20.124 -12.045 -4.932 1.00 34.95 ? 2 A A OP1 1 ATOM 23 O OP2 . A A 1 2 ? -18.551 -10.137 -4.203 1.00 31.46 ? 2 A A OP2 1 ATOM 24 O "O5'" . A A 1 2 ? -19.707 -11.564 -2.510 1.00 26.84 ? 2 A A "O5'" 1 ATOM 25 C "C5'" . A A 1 2 ? -20.254 -12.775 -2.016 1.00 26.55 ? 2 A A "C5'" 1 ATOM 26 C "C4'" . A A 1 2 ? -20.393 -12.744 -0.519 1.00 27.55 ? 2 A A "C4'" 1 ATOM 27 O "O4'" . A A 1 2 ? -19.108 -12.474 0.091 1.00 26.77 ? 2 A A "O4'" 1 ATOM 28 C "C3'" . A A 1 2 ? -21.286 -11.661 0.051 1.00 25.02 ? 2 A A "C3'" 1 ATOM 29 O "O3'" . A A 1 2 ? -22.654 -11.991 -0.022 1.00 27.13 ? 2 A A "O3'" 1 ATOM 30 C "C2'" . A A 1 2 ? -20.797 -11.571 1.481 1.00 22.63 ? 2 A A "C2'" 1 ATOM 31 O "O2'" . A A 1 2 ? -21.274 -12.694 2.207 1.00 26.96 ? 2 A A "O2'" 1 ATOM 32 C "C1'" . A A 1 2 ? -19.295 -11.745 1.286 1.00 23.74 ? 2 A A "C1'" 1 ATOM 33 N N9 . A A 1 2 ? -18.579 -10.463 1.170 1.00 21.08 ? 2 A A N9 1 ATOM 34 C C8 . A A 1 2 ? -18.097 -9.866 0.030 1.00 25.29 ? 2 A A C8 1 ATOM 35 N N7 . A A 1 2 ? -17.487 -8.729 0.251 1.00 20.82 ? 2 A A N7 1 ATOM 36 C C5 . A A 1 2 ? -17.578 -8.573 1.628 1.00 20.72 ? 2 A A C5 1 ATOM 37 C C6 . A A 1 2 ? -17.118 -7.572 2.487 1.00 19.94 ? 2 A A C6 1 ATOM 38 N N6 . A A 1 2 ? -16.459 -6.489 2.078 1.00 23.13 ? 2 A A N6 1 ATOM 39 N N1 . A A 1 2 ? -17.373 -7.711 3.806 1.00 18.64 ? 2 A A N1 1 ATOM 40 C C2 . A A 1 2 ? -18.038 -8.795 4.214 1.00 20.35 ? 2 A A C2 1 ATOM 41 N N3 . A A 1 2 ? -18.512 -9.808 3.498 1.00 21.21 ? 2 A A N3 1 ATOM 42 C C4 . A A 1 2 ? -18.247 -9.627 2.203 1.00 21.58 ? 2 A A C4 1 ATOM 43 P P . A A 1 3 ? -23.757 -10.832 -0.092 1.00 25.85 ? 3 A A P 1 ATOM 44 O OP1 . A A 1 3 ? -25.060 -11.509 -0.301 1.00 29.40 ? 3 A A OP1 1 ATOM 45 O OP2 . A A 1 3 ? -23.268 -9.779 -1.000 1.00 26.18 ? 3 A A OP2 1 ATOM 46 O "O5'" . A A 1 3 ? -23.754 -10.179 1.362 1.00 24.68 ? 3 A A "O5'" 1 ATOM 47 C "C5'" . A A 1 3 ? -24.216 -10.891 2.498 1.00 25.06 ? 3 A A "C5'" 1 ATOM 48 C "C4'" . A A 1 3 ? -23.820 -10.187 3.770 1.00 23.60 ? 3 A A "C4'" 1 ATOM 49 O "O4'" . A A 1 3 ? -22.386 -9.971 3.785 1.00 23.56 ? 3 A A "O4'" 1 ATOM 50 C "C3'" . A A 1 3 ? -24.396 -8.795 3.965 1.00 23.31 ? 3 A A "C3'" 1 ATOM 51 O "O3'" . A A 1 3 ? -25.710 -8.805 4.477 1.00 24.78 ? 3 A A "O3'" 1 ATOM 52 C "C2'" . A A 1 3 ? -23.404 -8.154 4.919 1.00 22.54 ? 3 A A "C2'" 1 ATOM 53 O "O2'" . A A 1 3 ? -23.633 -8.592 6.251 1.00 25.15 ? 3 A A "O2'" 1 ATOM 54 C "C1'" . A A 1 3 ? -22.091 -8.750 4.429 1.00 23.89 ? 3 A A "C1'" 1 ATOM 55 N N9 . A A 1 3 ? -21.417 -7.867 3.464 1.00 19.33 ? 3 A A N9 1 ATOM 56 C C8 . A A 1 3 ? -21.345 -7.951 2.097 1.00 22.51 ? 3 A A C8 1 ATOM 57 N N7 . A A 1 3 ? -20.651 -6.982 1.546 1.00 18.74 ? 3 A A N7 1 ATOM 58 C C5 . A A 1 3 ? -20.240 -6.217 2.635 1.00 18.09 ? 3 A A C5 1 ATOM 59 C C6 . A A 1 3 ? -19.463 -5.052 2.754 1.00 18.44 ? 3 A A C6 1 ATOM 60 N N6 . A A 1 3 ? -18.912 -4.400 1.723 1.00 18.48 ? 3 A A N6 1 ATOM 61 N N1 . A A 1 3 ? -19.257 -4.557 3.996 1.00 16.75 ? 3 A A N1 1 ATOM 62 C C2 . A A 1 3 ? -19.778 -5.195 5.057 1.00 18.13 ? 3 A A C2 1 ATOM 63 N N3 . A A 1 3 ? -20.515 -6.304 5.062 1.00 19.03 ? 3 A A N3 1 ATOM 64 C C4 . A A 1 3 ? -20.708 -6.756 3.812 1.00 19.85 ? 3 A A C4 1 ATOM 65 P P . G A 1 4 ? -26.604 -7.481 4.363 1.00 29.03 ? 4 G A P 1 ATOM 66 O OP1 . G A 1 4 ? -28.012 -7.862 4.672 1.00 32.75 ? 4 G A OP1 1 ATOM 67 O OP2 . G A 1 4 ? -26.296 -6.849 3.055 1.00 27.90 ? 4 G A OP2 1 ATOM 68 O "O5'" . G A 1 4 ? -26.037 -6.508 5.495 1.00 28.06 ? 4 G A "O5'" 1 ATOM 69 C "C5'" . G A 1 4 ? -26.382 -6.654 6.865 1.00 28.24 ? 4 G A "C5'" 1 ATOM 70 C "C4'" . G A 1 4 ? -25.984 -5.429 7.651 1.00 25.90 ? 4 G A "C4'" 1 ATOM 71 O "O4'" . G A 1 4 ? -24.536 -5.287 7.630 1.00 25.03 ? 4 G A "O4'" 1 ATOM 72 C "C3'" . G A 1 4 ? -26.483 -4.105 7.097 1.00 27.34 ? 4 G A "C3'" 1 ATOM 73 O "O3'" . G A 1 4 ? -27.823 -3.806 7.436 1.00 31.16 ? 4 G A "O3'" 1 ATOM 74 C "C2'" . G A 1 4 ? -25.478 -3.115 7.661 1.00 25.88 ? 4 G A "C2'" 1 ATOM 75 O "O2'" . G A 1 4 ? -25.740 -2.887 9.037 1.00 27.61 ? 4 G A "O2'" 1 ATOM 76 C "C1'" . G A 1 4 ? -24.188 -3.918 7.539 1.00 23.81 ? 4 G A "C1'" 1 ATOM 77 N N9 . G A 1 4 ? -23.549 -3.702 6.230 1.00 21.36 ? 4 G A N9 1 ATOM 78 C C8 . G A 1 4 ? -23.674 -4.534 5.138 1.00 20.86 ? 4 G A C8 1 ATOM 79 N N7 . G A 1 4 ? -23.011 -4.116 4.099 1.00 21.06 ? 4 G A N7 1 ATOM 80 C C5 . G A 1 4 ? -22.420 -2.928 4.522 1.00 21.86 ? 4 G A C5 1 ATOM 81 C C6 . G A 1 4 ? -21.569 -2.026 3.827 1.00 18.79 ? 4 G A C6 1 ATOM 82 O O6 . G A 1 4 ? -21.165 -2.084 2.672 1.00 20.20 ? 4 G A O6 1 ATOM 83 N N1 . G A 1 4 ? -21.176 -0.949 4.610 1.00 17.03 ? 4 G A N1 1 ATOM 84 C C2 . G A 1 4 ? -21.556 -0.763 5.915 1.00 19.50 ? 4 G A C2 1 ATOM 85 N N2 . G A 1 4 ? -21.075 0.346 6.501 1.00 21.33 ? 4 G A N2 1 ATOM 86 N N3 . G A 1 4 ? -22.341 -1.593 6.589 1.00 19.21 ? 4 G A N3 1 ATOM 87 C C4 . G A 1 4 ? -22.739 -2.655 5.833 1.00 20.84 ? 4 G A C4 1 ATOM 88 P P . A A 1 5 ? -28.735 -3.005 6.380 1.00 35.47 ? 5 A A P 1 ATOM 89 O OP1 . A A 1 5 ? -29.995 -2.659 7.098 1.00 38.93 ? 5 A A OP1 1 ATOM 90 O OP2 . A A 1 5 ? -28.766 -3.756 5.101 1.00 34.38 ? 5 A A OP2 1 ATOM 91 O "O5'" . A A 1 5 ? -27.912 -1.675 6.061 1.00 32.85 ? 5 A A "O5'" 1 ATOM 92 C "C5'" . A A 1 5 ? -28.185 -0.474 6.753 1.00 33.53 ? 5 A A "C5'" 1 ATOM 93 C "C4'" . A A 1 5 ? -27.274 0.665 6.357 1.00 30.68 ? 5 A A "C4'" 1 ATOM 94 O "O4'" . A A 1 5 ? -25.895 0.227 6.183 1.00 27.69 ? 5 A A "O4'" 1 ATOM 95 C "C3'" . A A 1 5 ? -27.553 1.396 5.058 1.00 31.34 ? 5 A A "C3'" 1 ATOM 96 O "O3'" . A A 1 5 ? -28.719 2.203 5.063 1.00 34.46 ? 5 A A "O3'" 1 ATOM 97 C "C2'" . A A 1 5 ? -26.263 2.184 4.888 1.00 29.42 ? 5 A A "C2'" 1 ATOM 98 O "O2'" . A A 1 5 ? -26.211 3.261 5.810 1.00 30.19 ? 5 A A "O2'" 1 ATOM 99 C "C1'" . A A 1 5 ? -25.232 1.138 5.319 1.00 27.43 ? 5 A A "C1'" 1 ATOM 100 N N9 . A A 1 5 ? -24.734 0.438 4.126 1.00 24.61 ? 5 A A N9 1 ATOM 101 C C8 . A A 1 5 ? -25.134 -0.758 3.594 1.00 25.83 ? 5 A A C8 1 ATOM 102 N N7 . A A 1 5 ? -24.503 -1.061 2.490 1.00 23.81 ? 5 A A N7 1 ATOM 103 C C5 . A A 1 5 ? -23.660 0.019 2.251 1.00 23.58 ? 5 A A C5 1 ATOM 104 C C6 . A A 1 5 ? -22.727 0.296 1.229 1.00 21.45 ? 5 A A C6 1 ATOM 105 N N6 . A A 1 5 ? -22.484 -0.507 0.187 1.00 20.27 ? 5 A A N6 1 ATOM 106 N N1 . A A 1 5 ? -22.038 1.455 1.303 1.00 21.44 ? 5 A A N1 1 ATOM 107 C C2 . A A 1 5 ? -22.287 2.269 2.341 1.00 21.39 ? 5 A A C2 1 ATOM 108 N N3 . A A 1 5 ? -23.134 2.117 3.360 1.00 22.54 ? 5 A A N3 1 ATOM 109 C C4 . A A 1 5 ? -23.800 0.955 3.255 1.00 22.41 ? 5 A A C4 1 ATOM 110 P P . A A 1 6 ? -29.485 2.497 3.676 1.00 36.64 ? 6 A A P 1 ATOM 111 O OP1 . A A 1 6 ? -30.789 3.115 4.018 1.00 40.41 ? 6 A A OP1 1 ATOM 112 O OP2 . A A 1 6 ? -29.438 1.286 2.818 1.00 38.40 ? 6 A A OP2 1 ATOM 113 O "O5'" . A A 1 6 ? -28.589 3.589 2.948 1.00 34.31 ? 6 A A "O5'" 1 ATOM 114 C "C5'" . A A 1 6 ? -28.288 4.818 3.579 1.00 33.97 ? 6 A A "C5'" 1 ATOM 115 C "C4'" . A A 1 6 ? -27.087 5.472 2.952 1.00 31.69 ? 6 A A "C4'" 1 ATOM 116 O "O4'" . A A 1 6 ? -25.985 4.530 2.872 1.00 32.37 ? 6 A A "O4'" 1 ATOM 117 C "C3'" . A A 1 6 ? -27.254 5.941 1.524 1.00 33.57 ? 6 A A "C3'" 1 ATOM 118 O "O3'" . A A 1 6 ? -27.978 7.152 1.435 1.00 36.71 ? 6 A A "O3'" 1 ATOM 119 C "C2'" . A A 1 6 ? -25.811 6.043 1.056 1.00 33.44 ? 6 A A "C2'" 1 ATOM 120 O "O2'" . A A 1 6 ? -25.193 7.202 1.600 1.00 34.88 ? 6 A A "O2'" 1 ATOM 121 C "C1'" . A A 1 6 ? -25.201 4.814 1.732 1.00 29.57 ? 6 A A "C1'" 1 ATOM 122 N N9 . A A 1 6 ? -25.206 3.639 0.841 1.00 28.87 ? 6 A A N9 1 ATOM 123 C C8 . A A 1 6 ? -26.018 2.532 0.858 1.00 26.68 ? 6 A A C8 1 ATOM 124 N N7 . A A 1 6 ? -25.751 1.668 -0.093 1.00 28.48 ? 6 A A N7 1 ATOM 125 C C5 . A A 1 6 ? -24.700 2.242 -0.784 1.00 26.79 ? 6 A A C5 1 ATOM 126 C C6 . A A 1 6 ? -23.954 1.829 -1.901 1.00 22.37 ? 6 A A C6 1 ATOM 127 N N6 . A A 1 6 ? -24.142 0.687 -2.561 1.00 24.38 ? 6 A A N6 1 ATOM 128 N N1 . A A 1 6 ? -22.970 2.648 -2.332 1.00 25.36 ? 6 A A N1 1 ATOM 129 C C2 . A A 1 6 ? -22.762 3.791 -1.666 1.00 22.41 ? 6 A A C2 1 ATOM 130 N N3 . A A 1 6 ? -23.392 4.282 -0.611 1.00 23.83 ? 6 A A N3 1 ATOM 131 C C4 . A A 1 6 ? -24.359 3.451 -0.212 1.00 24.45 ? 6 A A C4 1 ATOM 132 P P . G A 1 7 ? -28.894 7.446 0.149 1.00 40.86 ? 7 G A P 1 ATOM 133 O OP1 . G A 1 7 ? -29.752 8.618 0.464 1.00 40.40 ? 7 G A OP1 1 ATOM 134 O OP2 . G A 1 7 ? -29.532 6.179 -0.285 1.00 35.60 ? 7 G A OP2 1 ATOM 135 O "O5'" . G A 1 7 ? -27.835 7.901 -0.937 1.00 30.93 ? 7 G A "O5'" 1 ATOM 136 C "C5'" . G A 1 7 ? -27.081 9.089 -0.765 1.00 32.18 ? 7 G A "C5'" 1 ATOM 137 C "C4'" . G A 1 7 ? -25.851 9.072 -1.631 1.00 30.14 ? 7 G A "C4'" 1 ATOM 138 O "O4'" . G A 1 7 ? -25.151 7.822 -1.428 1.00 33.84 ? 7 G A "O4'" 1 ATOM 139 C "C3'" . G A 1 7 ? -26.101 9.114 -3.132 1.00 28.11 ? 7 G A "C3'" 1 ATOM 140 O "O3'" . G A 1 7 ? -26.268 10.426 -3.611 1.00 30.33 ? 7 G A "O3'" 1 ATOM 141 C "C2'" . G A 1 7 ? -24.863 8.446 -3.699 1.00 31.99 ? 7 G A "C2'" 1 ATOM 142 O "O2'" . G A 1 7 ? -23.772 9.357 -3.716 1.00 34.89 ? 7 G A "O2'" 1 ATOM 143 C "C1'" . G A 1 7 ? -24.589 7.381 -2.642 1.00 30.20 ? 7 G A "C1'" 1 ATOM 144 N N9 . G A 1 7 ? -25.182 6.073 -2.989 1.00 27.09 ? 7 G A N9 1 ATOM 145 C C8 . G A 1 7 ? -26.216 5.408 -2.382 1.00 30.46 ? 7 G A C8 1 ATOM 146 N N7 . G A 1 7 ? -26.476 4.251 -2.939 1.00 30.22 ? 7 G A N7 1 ATOM 147 C C5 . G A 1 7 ? -25.542 4.147 -3.965 1.00 23.74 ? 7 G A C5 1 ATOM 148 C C6 . G A 1 7 ? -25.306 3.126 -4.929 1.00 25.16 ? 7 G A C6 1 ATOM 149 O O6 . G A 1 7 ? -25.884 2.051 -5.085 1.00 28.70 ? 7 G A O6 1 ATOM 150 N N1 . G A 1 7 ? -24.267 3.442 -5.781 1.00 25.17 ? 7 G A N1 1 ATOM 151 C C2 . G A 1 7 ? -23.543 4.604 -5.721 1.00 26.98 ? 7 G A C2 1 ATOM 152 N N2 . G A 1 7 ? -22.577 4.752 -6.631 1.00 23.14 ? 7 G A N2 1 ATOM 153 N N3 . G A 1 7 ? -23.749 5.562 -4.840 1.00 26.01 ? 7 G A N3 1 ATOM 154 C C4 . G A 1 7 ? -24.752 5.269 -4.005 1.00 27.14 ? 7 G A C4 1 ATOM 155 P P . A A 1 8 ? -27.304 10.723 -4.795 1.00 26.13 ? 8 A A P 1 ATOM 156 O OP1 . A A 1 8 ? -27.507 12.202 -4.781 1.00 32.25 ? 8 A A OP1 1 ATOM 157 O OP2 . A A 1 8 ? -28.458 9.816 -4.683 1.00 26.35 ? 8 A A OP2 1 ATOM 158 O "O5'" . A A 1 8 ? -26.517 10.349 -6.125 1.00 27.25 ? 8 A A "O5'" 1 ATOM 159 C "C5'" . A A 1 8 ? -25.569 11.243 -6.673 1.00 26.55 ? 8 A A "C5'" 1 ATOM 160 C "C4'" . A A 1 8 ? -24.987 10.712 -7.951 1.00 25.30 ? 8 A A "C4'" 1 ATOM 161 O "O4'" . A A 1 8 ? -24.184 9.527 -7.678 1.00 23.47 ? 8 A A "O4'" 1 ATOM 162 C "C3'" . A A 1 8 ? -25.976 10.230 -9.000 1.00 25.22 ? 8 A A "C3'" 1 ATOM 163 O "O3'" . A A 1 8 ? -26.606 11.272 -9.725 1.00 24.40 ? 8 A A "O3'" 1 ATOM 164 C "C2'" . A A 1 8 ? -25.093 9.333 -9.847 1.00 20.67 ? 8 A A "C2'" 1 ATOM 165 O "O2'" . A A 1 8 ? -24.179 10.120 -10.591 1.00 25.51 ? 8 A A "O2'" 1 ATOM 166 C "C1'" . A A 1 8 ? -24.310 8.615 -8.754 1.00 23.61 ? 8 A A "C1'" 1 ATOM 167 N N9 . A A 1 8 ? -25.061 7.436 -8.275 1.00 22.29 ? 8 A A N9 1 ATOM 168 C C8 . A A 1 8 ? -25.902 7.351 -7.195 1.00 21.68 ? 8 A A C8 1 ATOM 169 N N7 . A A 1 8 ? -26.449 6.169 -7.049 1.00 21.06 ? 8 A A N7 1 ATOM 170 C C5 . A A 1 8 ? -25.948 5.440 -8.117 1.00 18.10 ? 8 A A C5 1 ATOM 171 C C6 . A A 1 8 ? -26.149 4.113 -8.543 1.00 20.37 ? 8 A A C6 1 ATOM 172 N N6 . A A 1 8 ? -26.933 3.247 -7.899 1.00 20.95 ? 8 A A N6 1 ATOM 173 N N1 . A A 1 8 ? -25.502 3.696 -9.650 1.00 19.67 ? 8 A A N1 1 ATOM 174 C C2 . A A 1 8 ? -24.709 4.552 -10.302 1.00 20.18 ? 8 A A C2 1 ATOM 175 N N3 . A A 1 8 ? -24.453 5.823 -9.991 1.00 19.99 ? 8 A A N3 1 ATOM 176 C C4 . A A 1 8 ? -25.103 6.205 -8.885 1.00 19.65 ? 8 A A C4 1 ATOM 177 P P . G A 1 9 ? -28.112 11.092 -10.283 1.00 22.31 ? 9 G A P 1 ATOM 178 O OP1 . G A 1 9 ? -28.482 12.397 -10.892 1.00 27.67 ? 9 G A OP1 1 ATOM 179 O OP2 . G A 1 9 ? -28.979 10.498 -9.247 1.00 23.35 ? 9 G A OP2 1 ATOM 180 O "O5'" . G A 1 9 ? -27.958 10.068 -11.495 1.00 22.93 ? 9 G A "O5'" 1 ATOM 181 C "C5'" . G A 1 9 ? -27.189 10.402 -12.640 1.00 24.32 ? 9 G A "C5'" 1 ATOM 182 C "C4'" . G A 1 9 ? -26.883 9.191 -13.483 1.00 23.45 ? 9 G A "C4'" 1 ATOM 183 O "O4'" . G A 1 9 ? -26.229 8.175 -12.678 1.00 21.80 ? 9 G A "O4'" 1 ATOM 184 C "C3'" . G A 1 9 ? -28.077 8.466 -14.070 1.00 21.17 ? 9 G A "C3'" 1 ATOM 185 O "O3'" . G A 1 9 ? -28.606 9.099 -15.219 1.00 24.03 ? 9 G A "O3'" 1 ATOM 186 C "C2'" . G A 1 9 ? -27.508 7.081 -14.338 1.00 22.80 ? 9 G A "C2'" 1 ATOM 187 O "O2'" . G A 1 9 ? -26.690 7.071 -15.494 1.00 24.15 ? 9 G A "O2'" 1 ATOM 188 C "C1'" . G A 1 9 ? -26.623 6.890 -13.116 1.00 21.98 ? 9 G A "C1'" 1 ATOM 189 N N9 . G A 1 9 ? -27.408 6.241 -12.062 1.00 18.67 ? 9 G A N9 1 ATOM 190 C C8 . G A 1 9 ? -28.005 6.807 -10.963 1.00 19.06 ? 9 G A C8 1 ATOM 191 N N7 . G A 1 9 ? -28.680 5.943 -10.268 1.00 19.15 ? 9 G A N7 1 ATOM 192 C C5 . G A 1 9 ? -28.517 4.743 -10.945 1.00 17.82 ? 9 G A C5 1 ATOM 193 C C6 . G A 1 9 ? -29.016 3.455 -10.659 1.00 18.47 ? 9 G A C6 1 ATOM 194 O O6 . G A 1 9 ? -29.734 3.107 -9.716 1.00 21.34 ? 9 G A O6 1 ATOM 195 N N1 . G A 1 9 ? -28.628 2.529 -11.615 1.00 17.41 ? 9 G A N1 1 ATOM 196 C C2 . G A 1 9 ? -27.847 2.789 -12.706 1.00 17.92 ? 9 G A C2 1 ATOM 197 N N2 . G A 1 9 ? -27.582 1.747 -13.513 1.00 19.49 ? 9 G A N2 1 ATOM 198 N N3 . G A 1 9 ? -27.373 3.996 -12.992 1.00 19.60 ? 9 G A N3 1 ATOM 199 C C4 . G A 1 9 ? -27.749 4.913 -12.071 1.00 19.50 ? 9 G A C4 1 HETATM 200 N N1 . 5CM B 2 1 ? -30.037 -2.279 -12.365 1.00 21.16 ? 1 5CM B N1 1 HETATM 201 C C2 . 5CM B 2 1 ? -29.452 -0.987 -12.425 1.00 20.09 ? 1 5CM B C2 1 HETATM 202 N N3 . 5CM B 2 1 ? -29.739 -0.085 -11.420 1.00 20.49 ? 1 5CM B N3 1 HETATM 203 C C4 . 5CM B 2 1 ? -30.554 -0.508 -10.476 1.00 21.66 ? 1 5CM B C4 1 HETATM 204 C C5 . 5CM B 2 1 ? -31.154 -1.759 -10.377 1.00 23.28 ? 1 5CM B C5 1 HETATM 205 C C5A . 5CM B 2 1 ? -32.041 -2.067 -9.259 1.00 26.79 ? 1 5CM B C5A 1 HETATM 206 C C6 . 5CM B 2 1 ? -30.884 -2.658 -11.361 1.00 23.36 ? 1 5CM B C6 1 HETATM 207 O O2 . 5CM B 2 1 ? -28.708 -0.674 -13.333 1.00 21.36 ? 1 5CM B O2 1 HETATM 208 N N4 . 5CM B 2 1 ? -30.812 0.432 -9.488 1.00 24.81 ? 1 5CM B N4 1 HETATM 209 C "C1'" . 5CM B 2 1 ? -29.756 -3.265 -13.448 1.00 22.49 ? 1 5CM B "C1'" 1 HETATM 210 C "C2'" . 5CM B 2 1 ? -28.333 -3.747 -13.268 1.00 22.49 ? 1 5CM B "C2'" 1 HETATM 211 C "C3'" . 5CM B 2 1 ? -28.516 -5.054 -12.552 1.00 24.12 ? 1 5CM B "C3'" 1 HETATM 212 C "C4'" . 5CM B 2 1 ? -29.851 -5.514 -13.099 1.00 24.78 ? 1 5CM B "C4'" 1 HETATM 213 O "O4'" . 5CM B 2 1 ? -30.602 -4.343 -13.320 1.00 24.60 ? 1 5CM B "O4'" 1 HETATM 214 O "O3'" . 5CM B 2 1 ? -27.475 -5.880 -12.901 1.00 27.62 ? 1 5CM B "O3'" 1 HETATM 215 C "C5'" . 5CM B 2 1 ? -30.507 -6.313 -11.960 1.00 29.75 ? 1 5CM B "C5'" 1 HETATM 216 O "O5'" . 5CM B 2 1 ? -31.681 -6.685 -12.487 1.00 35.93 ? 1 5CM B "O5'" 1 ATOM 217 P P . DT B 2 2 ? -26.089 -5.871 -12.092 1.00 27.35 ? 2 DT B P 1 ATOM 218 O OP1 . DT B 2 2 ? -25.270 -7.016 -12.567 1.00 31.50 ? 2 DT B OP1 1 ATOM 219 O OP2 . DT B 2 2 ? -26.402 -5.700 -10.652 1.00 28.57 ? 2 DT B OP2 1 ATOM 220 O "O5'" . DT B 2 2 ? -25.382 -4.522 -12.574 1.00 25.03 ? 2 DT B "O5'" 1 ATOM 221 C "C5'" . DT B 2 2 ? -24.845 -4.409 -13.878 1.00 23.45 ? 2 DT B "C5'" 1 ATOM 222 C "C4'" . DT B 2 2 ? -24.236 -3.033 -14.083 1.00 24.54 ? 2 DT B "C4'" 1 ATOM 223 O "O4'" . DT B 2 2 ? -25.259 -2.019 -13.956 1.00 24.00 ? 2 DT B "O4'" 1 ATOM 224 C "C3'" . DT B 2 2 ? -23.203 -2.619 -13.047 1.00 24.72 ? 2 DT B "C3'" 1 ATOM 225 O "O3'" . DT B 2 2 ? -21.956 -3.192 -13.338 1.00 27.98 ? 2 DT B "O3'" 1 ATOM 226 C "C2'" . DT B 2 2 ? -23.180 -1.116 -13.247 1.00 25.59 ? 2 DT B "C2'" 1 ATOM 227 C "C1'" . DT B 2 2 ? -24.663 -0.830 -13.427 1.00 23.54 ? 2 DT B "C1'" 1 ATOM 228 N N1 . DT B 2 2 ? -25.343 -0.455 -12.162 1.00 21.08 ? 2 DT B N1 1 ATOM 229 C C2 . DT B 2 2 ? -25.204 0.829 -11.712 1.00 20.27 ? 2 DT B C2 1 ATOM 230 O O2 . DT B 2 2 ? -24.548 1.664 -12.296 1.00 21.90 ? 2 DT B O2 1 ATOM 231 N N3 . DT B 2 2 ? -25.863 1.107 -10.556 1.00 20.45 ? 2 DT B N3 1 ATOM 232 C C4 . DT B 2 2 ? -26.636 0.240 -9.812 1.00 20.07 ? 2 DT B C4 1 ATOM 233 O O4 . DT B 2 2 ? -27.204 0.584 -8.785 1.00 22.19 ? 2 DT B O4 1 ATOM 234 C C5 . DT B 2 2 ? -26.740 -1.100 -10.333 1.00 21.01 ? 2 DT B C5 1 ATOM 235 C C7 . DT B 2 2 ? -27.547 -2.127 -9.596 1.00 21.32 ? 2 DT B C7 1 ATOM 236 C C6 . DT B 2 2 ? -26.094 -1.384 -11.474 1.00 22.24 ? 2 DT B C6 1 ATOM 237 P P . DC B 2 3 ? -20.970 -3.617 -12.141 1.00 28.27 ? 3 DC B P 1 ATOM 238 O OP1 . DC B 2 3 ? -19.868 -4.391 -12.763 1.00 36.12 ? 3 DC B OP1 1 ATOM 239 O OP2 . DC B 2 3 ? -21.790 -4.239 -11.077 1.00 28.62 ? 3 DC B OP2 1 ATOM 240 O "O5'" . DC B 2 3 ? -20.399 -2.229 -11.603 1.00 32.36 ? 3 DC B "O5'" 1 ATOM 241 C "C5'" . DC B 2 3 ? -19.563 -1.433 -12.417 1.00 29.48 ? 3 DC B "C5'" 1 ATOM 242 C "C4'" . DC B 2 3 ? -19.568 0.013 -11.949 1.00 31.00 ? 3 DC B "C4'" 1 ATOM 243 O "O4'" . DC B 2 3 ? -20.928 0.493 -11.823 1.00 30.64 ? 3 DC B "O4'" 1 ATOM 244 C "C3'" . DC B 2 3 ? -18.977 0.249 -10.574 1.00 29.15 ? 3 DC B "C3'" 1 ATOM 245 O "O3'" . DC B 2 3 ? -17.571 0.309 -10.664 1.00 32.02 ? 3 DC B "O3'" 1 ATOM 246 C "C2'" . DC B 2 3 ? -19.576 1.606 -10.228 1.00 29.76 ? 3 DC B "C2'" 1 ATOM 247 C "C1'" . DC B 2 3 ? -20.990 1.473 -10.793 1.00 28.50 ? 3 DC B "C1'" 1 ATOM 248 N N1 . DC B 2 3 ? -21.989 1.044 -9.776 1.00 26.25 ? 3 DC B N1 1 ATOM 249 C C2 . DC B 2 3 ? -22.448 1.969 -8.830 1.00 23.77 ? 3 DC B C2 1 ATOM 250 O O2 . DC B 2 3 ? -22.018 3.134 -8.864 1.00 26.88 ? 3 DC B O2 1 ATOM 251 N N3 . DC B 2 3 ? -23.355 1.574 -7.915 1.00 25.70 ? 3 DC B N3 1 ATOM 252 C C4 . DC B 2 3 ? -23.796 0.310 -7.903 1.00 24.49 ? 3 DC B C4 1 ATOM 253 N N4 . DC B 2 3 ? -24.686 -0.030 -6.968 1.00 27.01 ? 3 DC B N4 1 ATOM 254 C C5 . DC B 2 3 ? -23.337 -0.655 -8.853 1.00 25.64 ? 3 DC B C5 1 ATOM 255 C C6 . DC B 2 3 ? -22.440 -0.249 -9.760 1.00 24.33 ? 3 DC B C6 1 ATOM 256 P P . DT B 2 4 ? -16.662 0.032 -9.370 1.00 30.27 ? 4 DT B P 1 ATOM 257 O OP1 . DT B 2 4 ? -15.260 0.148 -9.826 1.00 34.58 ? 4 DT B OP1 1 ATOM 258 O OP2 . DT B 2 4 ? -17.121 -1.207 -8.714 1.00 28.92 ? 4 DT B OP2 1 ATOM 259 O "O5'" . DT B 2 4 ? -16.993 1.252 -8.399 1.00 29.78 ? 4 DT B "O5'" 1 ATOM 260 C "C5'" . DT B 2 4 ? -16.570 2.551 -8.733 1.00 26.87 ? 4 DT B "C5'" 1 ATOM 261 C "C4'" . DT B 2 4 ? -16.881 3.521 -7.616 1.00 27.15 ? 4 DT B "C4'" 1 ATOM 262 O "O4'" . DT B 2 4 ? -18.315 3.721 -7.519 1.00 25.38 ? 4 DT B "O4'" 1 ATOM 263 C "C3'" . DT B 2 4 ? -16.485 3.053 -6.232 1.00 24.69 ? 4 DT B "C3'" 1 ATOM 264 O "O3'" . DT B 2 4 ? -15.116 3.295 -6.014 1.00 26.14 ? 4 DT B "O3'" 1 ATOM 265 C "C2'" . DT B 2 4 ? -17.357 3.948 -5.365 1.00 23.81 ? 4 DT B "C2'" 1 ATOM 266 C "C1'" . DT B 2 4 ? -18.663 3.943 -6.159 1.00 25.42 ? 4 DT B "C1'" 1 ATOM 267 N N1 . DT B 2 4 ? -19.617 2.877 -5.725 1.00 23.58 ? 4 DT B N1 1 ATOM 268 C C2 . DT B 2 4 ? -20.462 3.134 -4.684 1.00 21.72 ? 4 DT B C2 1 ATOM 269 O O2 . DT B 2 4 ? -20.481 4.193 -4.097 1.00 24.77 ? 4 DT B O2 1 ATOM 270 N N3 . DT B 2 4 ? -21.301 2.107 -4.357 1.00 24.63 ? 4 DT B N3 1 ATOM 271 C C4 . DT B 2 4 ? -21.367 0.863 -4.951 1.00 24.32 ? 4 DT B C4 1 ATOM 272 O O4 . DT B 2 4 ? -22.153 0.005 -4.580 1.00 27.19 ? 4 DT B O4 1 ATOM 273 C C5 . DT B 2 4 ? -20.439 0.646 -6.033 1.00 25.45 ? 4 DT B C5 1 ATOM 274 C C7 . DT B 2 4 ? -20.411 -0.670 -6.752 1.00 26.54 ? 4 DT B C7 1 ATOM 275 C C6 . DT B 2 4 ? -19.618 1.655 -6.368 1.00 23.88 ? 4 DT B C6 1 ATOM 276 P P . DT B 2 5 ? -14.324 2.500 -4.873 1.00 24.81 ? 5 DT B P 1 ATOM 277 O OP1 . DT B 2 5 ? -12.898 2.878 -5.032 1.00 26.38 ? 5 DT B OP1 1 ATOM 278 O OP2 . DT B 2 5 ? -14.763 1.085 -4.905 1.00 22.80 ? 5 DT B OP2 1 ATOM 279 O "O5'" . DT B 2 5 ? -14.847 3.155 -3.517 1.00 21.81 ? 5 DT B "O5'" 1 ATOM 280 C "C5'" . DT B 2 5 ? -14.509 4.491 -3.219 1.00 22.63 ? 5 DT B "C5'" 1 ATOM 281 C "C4'" . DT B 2 5 ? -15.325 5.010 -2.054 1.00 21.22 ? 5 DT B "C4'" 1 ATOM 282 O "O4'" . DT B 2 5 ? -16.737 4.918 -2.363 1.00 23.00 ? 5 DT B "O4'" 1 ATOM 283 C "C3'" . DT B 2 5 ? -15.195 4.224 -0.771 1.00 22.56 ? 5 DT B "C3'" 1 ATOM 284 O "O3'" . DT B 2 5 ? -14.024 4.574 -0.089 1.00 23.77 ? 5 DT B "O3'" 1 ATOM 285 C "C2'" . DT B 2 5 ? -16.429 4.698 -0.029 1.00 23.80 ? 5 DT B "C2'" 1 ATOM 286 C "C1'" . DT B 2 5 ? -17.451 4.711 -1.157 1.00 20.56 ? 5 DT B "C1'" 1 ATOM 287 N N1 . DT B 2 5 ? -18.228 3.441 -1.259 1.00 20.27 ? 5 DT B N1 1 ATOM 288 C C2 . DT B 2 5 ? -19.313 3.286 -0.453 1.00 20.18 ? 5 DT B C2 1 ATOM 289 O O2 . DT B 2 5 ? -19.657 4.128 0.346 1.00 22.35 ? 5 DT B O2 1 ATOM 290 N N3 . DT B 2 5 ? -19.983 2.105 -0.605 1.00 20.23 ? 5 DT B N3 1 ATOM 291 C C4 . DT B 2 5 ? -19.679 1.087 -1.476 1.00 20.49 ? 5 DT B C4 1 ATOM 292 O O4 . DT B 2 5 ? -20.349 0.060 -1.545 1.00 20.96 ? 5 DT B O4 1 ATOM 293 C C5 . DT B 2 5 ? -18.520 1.306 -2.297 1.00 20.30 ? 5 DT B C5 1 ATOM 294 C C7 . DT B 2 5 ? -18.097 0.266 -3.288 1.00 22.63 ? 5 DT B C7 1 ATOM 295 C C6 . DT B 2 5 ? -17.854 2.462 -2.157 1.00 20.45 ? 5 DT B C6 1 ATOM 296 P P . DC B 2 6 ? -13.396 3.564 0.982 1.00 22.43 ? 6 DC B P 1 ATOM 297 O OP1 . DC B 2 6 ? -12.056 4.077 1.349 1.00 26.27 ? 6 DC B OP1 1 ATOM 298 O OP2 . DC B 2 6 ? -13.566 2.168 0.516 1.00 25.28 ? 6 DC B OP2 1 ATOM 299 O "O5'" . DC B 2 6 ? -14.332 3.689 2.266 1.00 21.29 ? 6 DC B "O5'" 1 ATOM 300 C "C5'" . DC B 2 6 ? -14.297 4.859 3.060 1.00 20.15 ? 6 DC B "C5'" 1 ATOM 301 C "C4'" . DC B 2 6 ? -15.305 4.778 4.182 1.00 20.33 ? 6 DC B "C4'" 1 ATOM 302 O "O4'" . DC B 2 6 ? -16.634 4.647 3.625 1.00 22.00 ? 6 DC B "O4'" 1 ATOM 303 C "C3'" . DC B 2 6 ? -15.147 3.569 5.075 1.00 21.45 ? 6 DC B "C3'" 1 ATOM 304 O "O3'" . DC B 2 6 ? -14.194 3.844 6.072 1.00 23.50 ? 6 DC B "O3'" 1 ATOM 305 C "C2'" . DC B 2 6 ? -16.544 3.435 5.663 1.00 19.96 ? 6 DC B "C2'" 1 ATOM 306 C "C1'" . DC B 2 6 ? -17.416 3.805 4.464 1.00 21.16 ? 6 DC B "C1'" 1 ATOM 307 N N1 . DC B 2 6 ? -17.852 2.622 3.676 1.00 19.85 ? 6 DC B N1 1 ATOM 308 C C2 . DC B 2 6 ? -18.909 1.834 4.151 1.00 18.81 ? 6 DC B C2 1 ATOM 309 O O2 . DC B 2 6 ? -19.470 2.153 5.208 1.00 21.81 ? 6 DC B O2 1 ATOM 310 N N3 . DC B 2 6 ? -19.294 0.753 3.430 1.00 18.25 ? 6 DC B N3 1 ATOM 311 C C4 . DC B 2 6 ? -18.665 0.445 2.287 1.00 18.71 ? 6 DC B C4 1 ATOM 312 N N4 . DC B 2 6 ? -19.084 -0.634 1.611 1.00 20.25 ? 6 DC B N4 1 ATOM 313 C C5 . DC B 2 6 ? -17.578 1.231 1.795 1.00 22.73 ? 6 DC B C5 1 ATOM 314 C C6 . DC B 2 6 ? -17.208 2.296 2.518 1.00 19.07 ? 6 DC B C6 1 ATOM 315 P P . DT B 2 7 ? -13.167 2.708 6.537 1.00 23.54 ? 7 DT B P 1 ATOM 316 O OP1 . DT B 2 7 ? -12.296 3.326 7.563 1.00 27.95 ? 7 DT B OP1 1 ATOM 317 O OP2 . DT B 2 7 ? -12.590 2.058 5.357 1.00 24.36 ? 7 DT B OP2 1 ATOM 318 O "O5'" . DT B 2 7 ? -14.101 1.649 7.267 1.00 23.24 ? 7 DT B "O5'" 1 ATOM 319 C "C5'" . DT B 2 7 ? -14.670 1.966 8.526 1.00 23.44 ? 7 DT B "C5'" 1 ATOM 320 C "C4'" . DT B 2 7 ? -15.758 0.980 8.878 1.00 21.85 ? 7 DT B "C4'" 1 ATOM 321 O "O4'" . DT B 2 7 ? -16.732 0.956 7.817 1.00 20.19 ? 7 DT B "O4'" 1 ATOM 322 C "C3'" . DT B 2 7 ? -15.307 -0.462 9.015 1.00 21.29 ? 7 DT B "C3'" 1 ATOM 323 O "O3'" . DT B 2 7 ? -14.810 -0.694 10.319 1.00 22.32 ? 7 DT B "O3'" 1 ATOM 324 C "C2'" . DT B 2 7 ? -16.615 -1.204 8.793 1.00 21.01 ? 7 DT B "C2'" 1 ATOM 325 C "C1'" . DT B 2 7 ? -17.287 -0.342 7.727 1.00 20.70 ? 7 DT B "C1'" 1 ATOM 326 N N1 . DT B 2 7 ? -17.100 -0.870 6.358 1.00 20.52 ? 7 DT B N1 1 ATOM 327 C C2 . DT B 2 7 ? -17.915 -1.885 5.963 1.00 18.27 ? 7 DT B C2 1 ATOM 328 O O2 . DT B 2 7 ? -18.775 -2.346 6.682 1.00 18.48 ? 7 DT B O2 1 ATOM 329 N N3 . DT B 2 7 ? -17.702 -2.343 4.697 1.00 17.60 ? 7 DT B N3 1 ATOM 330 C C4 . DT B 2 7 ? -16.745 -1.906 3.807 1.00 20.30 ? 7 DT B C4 1 ATOM 331 O O4 . DT B 2 7 ? -16.627 -2.392 2.685 1.00 20.18 ? 7 DT B O4 1 ATOM 332 C C5 . DT B 2 7 ? -15.891 -0.847 4.289 1.00 19.41 ? 7 DT B C5 1 ATOM 333 C C7 . DT B 2 7 ? -14.819 -0.291 3.405 1.00 21.42 ? 7 DT B C7 1 ATOM 334 C C6 . DT B 2 7 ? -16.101 -0.382 5.535 1.00 20.38 ? 7 DT B C6 1 ATOM 335 P P . DT B 2 8 ? -13.752 -1.879 10.585 1.00 23.54 ? 8 DT B P 1 ATOM 336 O OP1 . DT B 2 8 ? -13.227 -1.667 11.956 1.00 25.85 ? 8 DT B OP1 1 ATOM 337 O OP2 . DT B 2 8 ? -12.820 -1.961 9.438 1.00 22.96 ? 8 DT B OP2 1 ATOM 338 O "O5'" . DT B 2 8 ? -14.639 -3.201 10.592 1.00 22.93 ? 8 DT B "O5'" 1 ATOM 339 C "C5'" . DT B 2 8 ? -15.517 -3.468 11.677 1.00 21.49 ? 8 DT B "C5'" 1 ATOM 340 C "C4'" . DT B 2 8 ? -16.463 -4.590 11.309 1.00 17.78 ? 8 DT B "C4'" 1 ATOM 341 O "O4'" . DT B 2 8 ? -17.086 -4.269 10.049 1.00 19.86 ? 8 DT B "O4'" 1 ATOM 342 C "C3'" . DT B 2 8 ? -15.799 -5.928 11.064 1.00 19.22 ? 8 DT B "C3'" 1 ATOM 343 O "O3'" . DT B 2 8 ? -15.688 -6.625 12.277 1.00 20.68 ? 8 DT B "O3'" 1 ATOM 344 C "C2'" . DT B 2 8 ? -16.784 -6.616 10.134 1.00 18.97 ? 8 DT B "C2'" 1 ATOM 345 C "C1'" . DT B 2 8 ? -17.312 -5.460 9.316 1.00 18.80 ? 8 DT B "C1'" 1 ATOM 346 N N1 . DT B 2 8 ? -16.684 -5.334 7.983 1.00 17.36 ? 8 DT B N1 1 ATOM 347 C C2 . DT B 2 8 ? -17.154 -6.124 6.987 1.00 19.89 ? 8 DT B C2 1 ATOM 348 O O2 . DT B 2 8 ? -18.024 -6.941 7.163 1.00 19.26 ? 8 DT B O2 1 ATOM 349 N N3 . DT B 2 8 ? -16.565 -5.946 5.776 1.00 18.21 ? 8 DT B N3 1 ATOM 350 C C4 . DT B 2 8 ? -15.566 -5.055 5.460 1.00 20.48 ? 8 DT B C4 1 ATOM 351 O O4 . DT B 2 8 ? -15.115 -4.961 4.322 1.00 20.66 ? 8 DT B O4 1 ATOM 352 C C5 . DT B 2 8 ? -15.103 -4.234 6.558 1.00 17.97 ? 8 DT B C5 1 ATOM 353 C C7 . DT B 2 8 ? -14.012 -3.230 6.336 1.00 23.46 ? 8 DT B C7 1 ATOM 354 C C6 . DT B 2 8 ? -15.679 -4.410 7.761 1.00 20.75 ? 8 DT B C6 1 HETATM 355 N N1 . 5CM B 2 9 ? -15.933 -10.041 7.753 1.00 21.18 ? 9 5CM B N1 1 HETATM 356 C C2 . 5CM B 2 9 ? -15.975 -10.314 6.379 1.00 19.84 ? 9 5CM B C2 1 HETATM 357 N N3 . 5CM B 2 9 ? -15.176 -9.564 5.518 1.00 20.43 ? 9 5CM B N3 1 HETATM 358 C C4 . 5CM B 2 9 ? -14.421 -8.618 6.105 1.00 20.78 ? 9 5CM B C4 1 HETATM 359 C C5 . 5CM B 2 9 ? -14.354 -8.318 7.481 1.00 20.35 ? 9 5CM B C5 1 HETATM 360 C C5A . 5CM B 2 9 ? -13.475 -7.254 7.998 1.00 20.82 ? 9 5CM B C5A 1 HETATM 361 C C6 . 5CM B 2 9 ? -15.155 -9.054 8.309 1.00 18.11 ? 9 5CM B C6 1 HETATM 362 O O2 . 5CM B 2 9 ? -16.704 -11.218 5.965 1.00 20.98 ? 9 5CM B O2 1 HETATM 363 N N4 . 5CM B 2 9 ? -13.635 -7.885 5.205 1.00 21.18 ? 9 5CM B N4 1 HETATM 364 C "C1'" . 5CM B 2 9 ? -16.821 -10.813 8.660 1.00 19.86 ? 9 5CM B "C1'" 1 HETATM 365 C "C2'" . 5CM B 2 9 ? -16.079 -12.058 9.165 1.00 22.82 ? 9 5CM B "C2'" 1 HETATM 366 C "C3'" . 5CM B 2 9 ? -15.749 -11.693 10.594 1.00 20.43 ? 9 5CM B "C3'" 1 HETATM 367 C "C4'" . 5CM B 2 9 ? -16.885 -10.704 10.942 1.00 21.87 ? 9 5CM B "C4'" 1 HETATM 368 O "O4'" . 5CM B 2 9 ? -17.127 -9.998 9.745 1.00 18.94 ? 9 5CM B "O4'" 1 HETATM 369 O "O3'" . 5CM B 2 9 ? -15.742 -12.874 11.338 1.00 22.52 ? 9 5CM B "O3'" 1 HETATM 370 C "C5'" . 5CM B 2 9 ? -16.381 -9.714 12.035 1.00 20.17 ? 9 5CM B "C5'" 1 HETATM 371 O "O5'" . 5CM B 2 9 ? -15.289 -9.140 11.493 1.00 21.20 ? 9 5CM B "O5'" 1 HETATM 372 P P . 5CM B 2 9 ? -14.619 -7.811 12.391 1.00 21.21 ? 9 5CM B P 1 HETATM 373 O OP1 . 5CM B 2 9 ? -14.590 -8.368 13.813 1.00 23.33 ? 9 5CM B OP1 1 HETATM 374 O OP2 . 5CM B 2 9 ? -13.304 -7.471 11.714 1.00 22.31 ? 9 5CM B OP2 1 HETATM 375 N N1 . SPM C 3 . ? -33.339 1.609 -7.958 1.00 34.88 ? 101 SPM A N1 1 HETATM 376 C C2 . SPM C 3 . ? -33.354 2.941 -7.364 1.00 36.61 ? 101 SPM A C2 1 HETATM 377 C C3 . SPM C 3 . ? -32.347 3.843 -8.067 1.00 31.97 ? 101 SPM A C3 1 HETATM 378 C C4 . SPM C 3 . ? -31.226 4.262 -7.124 1.00 35.04 ? 101 SPM A C4 1 HETATM 379 N N5 . SPM C 3 . ? -30.361 5.293 -7.686 1.00 26.99 ? 101 SPM A N5 1 HETATM 380 C C6 . SPM C 3 . ? -31.060 6.553 -7.577 1.00 25.99 ? 101 SPM A C6 1 HETATM 381 C C7 . SPM C 3 . ? -30.120 7.742 -7.367 1.00 25.99 ? 101 SPM A C7 1 HETATM 382 C C8 . SPM C 3 . ? -30.982 8.952 -7.023 1.00 27.34 ? 101 SPM A C8 1 HETATM 383 C C9 . SPM C 3 . ? -30.138 10.213 -6.893 1.00 25.57 ? 101 SPM A C9 1 HETATM 384 N N10 . SPM C 3 . ? -31.030 11.352 -6.766 1.00 32.32 ? 101 SPM A N10 1 HETATM 385 C C11 . SPM C 3 . ? -30.400 12.420 -6.014 1.00 30.84 ? 101 SPM A C11 1 HETATM 386 C C12 . SPM C 3 . ? -29.548 13.280 -6.944 1.00 27.60 ? 101 SPM A C12 1 HETATM 387 C C13 . SPM C 3 . ? -30.435 13.902 -8.020 1.00 29.89 ? 101 SPM A C13 1 HETATM 388 N N14 . SPM C 3 . ? -29.615 14.508 -9.054 1.00 32.00 ? 101 SPM A N14 1 HETATM 389 O O . HOH D 4 . ? -27.081 -3.770 3.628 1.00 34.57 ? 201 HOH A O 1 HETATM 390 O O . HOH D 4 . ? -27.599 0.465 -4.355 1.00 36.05 ? 202 HOH A O 1 HETATM 391 O O . HOH D 4 . ? -19.832 -8.225 -3.360 1.00 35.95 ? 203 HOH A O 1 HETATM 392 O O . HOH D 4 . ? -22.868 9.402 -12.721 1.00 28.70 ? 204 HOH A O 1 HETATM 393 O O . HOH D 4 . ? -25.156 -10.394 7.378 1.00 36.13 ? 205 HOH A O 1 HETATM 394 O O . HOH D 4 . ? -12.555 -6.682 1.206 1.00 34.38 ? 206 HOH A O 1 HETATM 395 O O . HOH D 4 . ? -25.316 5.720 5.970 1.00 29.80 ? 207 HOH A O 1 HETATM 396 O O . HOH D 4 . ? -30.213 -6.397 4.962 1.00 36.54 ? 208 HOH A O 1 HETATM 397 O O . HOH D 4 . ? -26.792 -0.782 -0.250 1.00 37.70 ? 209 HOH A O 1 HETATM 398 O O . HOH D 4 . ? -22.446 6.767 -11.490 1.00 30.35 ? 210 HOH A O 1 HETATM 399 O O . HOH D 4 . ? -19.674 -12.016 4.531 1.00 26.02 ? 211 HOH A O 1 HETATM 400 O O . HOH D 4 . ? -19.283 -5.544 -0.697 1.00 32.34 ? 212 HOH A O 1 HETATM 401 O O . HOH D 4 . ? -23.028 4.390 4.900 1.00 33.28 ? 213 HOH A O 1 HETATM 402 O O . HOH D 4 . ? -22.004 -3.631 0.560 1.00 26.19 ? 214 HOH A O 1 HETATM 403 O O . HOH D 4 . ? -28.576 4.707 -5.663 1.00 30.30 ? 215 HOH A O 1 HETATM 404 O O . HOH D 4 . ? -23.949 -5.703 2.032 1.00 28.55 ? 216 HOH A O 1 HETATM 405 O O . HOH D 4 . ? -22.890 -12.146 -4.561 1.00 35.87 ? 217 HOH A O 1 HETATM 406 O O . HOH D 4 . ? -25.149 -3.123 0.695 1.00 33.12 ? 218 HOH A O 1 HETATM 407 O O . HOH D 4 . ? -27.814 -4.272 10.413 1.00 34.68 ? 219 HOH A O 1 HETATM 408 O O . HOH D 4 . ? -24.211 12.945 -11.161 1.00 32.13 ? 220 HOH A O 1 HETATM 409 O O . HOH D 4 . ? -29.428 17.029 -7.581 1.00 37.83 ? 221 HOH A O 1 HETATM 410 O O . HOH D 4 . ? -15.419 -5.597 -0.545 1.00 34.94 ? 222 HOH A O 1 HETATM 411 O O . HOH D 4 . ? -31.069 1.418 -5.984 1.00 39.33 ? 223 HOH A O 1 HETATM 412 O O A HOH D 4 . ? -17.404 -14.674 1.257 0.44 26.35 ? 224 HOH A O 1 HETATM 413 O O B HOH D 4 . ? -18.433 -14.736 1.972 0.56 25.50 ? 224 HOH A O 1 HETATM 414 O O . HOH D 4 . ? -30.352 -3.620 9.956 1.00 38.61 ? 225 HOH A O 1 HETATM 415 O O . HOH D 4 . ? -23.852 -6.815 -0.500 1.00 33.33 ? 226 HOH A O 1 HETATM 416 O O . HOH D 4 . ? -22.137 6.811 0.594 1.00 36.57 ? 227 HOH A O 1 HETATM 417 O O . HOH D 4 . ? -23.774 12.488 -2.957 1.00 35.88 ? 228 HOH A O 1 HETATM 418 O O . HOH D 4 . ? -24.924 14.129 -4.429 1.00 36.23 ? 229 HOH A O 1 HETATM 419 O O . HOH D 4 . ? -28.817 13.331 -14.090 1.00 36.64 ? 230 HOH A O 1 HETATM 420 O O . HOH D 4 . ? -30.531 12.274 -1.593 1.00 40.15 ? 231 HOH A O 1 HETATM 421 O O . HOH E 4 . ? -27.983 -6.421 -9.049 1.00 35.88 ? 101 HOH B O 1 HETATM 422 O O . HOH E 4 . ? -10.781 2.386 9.320 1.00 37.56 ? 102 HOH B O 1 HETATM 423 O O . HOH E 4 . ? -11.429 -5.757 11.441 1.00 36.13 ? 103 HOH B O 1 HETATM 424 O O . HOH E 4 . ? -17.632 -5.085 -11.722 1.00 43.77 ? 104 HOH B O 1 HETATM 425 O O . HOH E 4 . ? -13.574 -7.239 15.882 1.00 36.02 ? 105 HOH B O 1 HETATM 426 O O . HOH E 4 . ? -20.474 -2.345 -2.453 1.00 32.35 ? 106 HOH B O 1 HETATM 427 O O . HOH E 4 . ? -15.138 0.449 -0.691 1.00 26.45 ? 107 HOH B O 1 HETATM 428 O O . HOH E 4 . ? -28.645 -0.245 -6.740 1.00 27.66 ? 108 HOH B O 1 HETATM 429 O O . HOH E 4 . ? -14.079 -0.547 -2.916 1.00 32.95 ? 109 HOH B O 1 HETATM 430 O O . HOH E 4 . ? -14.938 -12.668 13.880 1.00 26.45 ? 110 HOH B O 1 HETATM 431 O O . HOH E 4 . ? -14.799 -15.159 10.304 1.00 28.57 ? 111 HOH B O 1 HETATM 432 O O . HOH E 4 . ? -11.905 -3.371 13.565 1.00 38.28 ? 112 HOH B O 1 HETATM 433 O O . HOH E 4 . ? -13.647 -10.566 15.058 1.00 25.88 ? 113 HOH B O 1 HETATM 434 O O . HOH E 4 . ? -10.859 3.317 3.649 1.00 36.45 ? 114 HOH B O 1 HETATM 435 O O . HOH E 4 . ? -20.181 -4.654 -15.442 1.00 37.31 ? 115 HOH B O 1 HETATM 436 O O A HOH E 4 . ? -22.780 -2.613 -5.060 0.54 28.29 ? 116 HOH B O 1 HETATM 437 O O B HOH E 4 . ? -21.662 -4.319 -6.037 0.46 29.46 ? 116 HOH B O 1 HETATM 438 O O . HOH E 4 . ? -10.882 -0.594 8.051 1.00 33.67 ? 117 HOH B O 1 HETATM 439 O O . HOH E 4 . ? -16.496 -0.799 -5.905 1.00 30.66 ? 118 HOH B O 1 HETATM 440 O O . HOH E 4 . ? -12.776 -4.207 3.042 1.00 33.00 ? 119 HOH B O 1 HETATM 441 O O . HOH E 4 . ? -17.965 -3.846 -8.925 1.00 37.79 ? 120 HOH B O 1 HETATM 442 O O . HOH E 4 . ? -11.199 -0.366 5.456 1.00 35.34 ? 121 HOH B O 1 HETATM 443 O O . HOH E 4 . ? -22.242 -7.001 -11.123 1.00 37.69 ? 122 HOH B O 1 HETATM 444 O O . HOH E 4 . ? -13.481 5.399 9.046 1.00 35.61 ? 123 HOH B O 1 HETATM 445 O O . HOH E 4 . ? -11.753 0.070 0.987 1.00 34.80 ? 124 HOH B O 1 HETATM 446 O O . HOH E 4 . ? -21.371 6.811 -3.570 1.00 32.58 ? 125 HOH B O 1 HETATM 447 O O . HOH E 4 . ? -11.451 -4.288 8.638 1.00 34.23 ? 126 HOH B O 1 HETATM 448 O O . HOH E 4 . ? -24.522 -9.331 -11.120 1.00 37.22 ? 127 HOH B O 1 HETATM 449 O O . HOH E 4 . ? -17.718 -13.898 5.958 1.00 29.27 ? 128 HOH B O 1 HETATM 450 O O . HOH E 4 . ? -16.852 -1.546 -0.049 1.00 27.02 ? 129 HOH B O 1 HETATM 451 O O . HOH E 4 . ? -20.759 4.558 6.120 1.00 27.60 ? 130 HOH B O 1 HETATM 452 O O . HOH E 4 . ? -20.837 -4.020 -8.336 1.00 39.73 ? 131 HOH B O 1 HETATM 453 O O . HOH E 4 . ? -11.453 -5.957 5.386 1.00 30.23 ? 132 HOH B O 1 HETATM 454 O O . HOH E 4 . ? -24.274 -4.124 -9.371 1.00 28.76 ? 133 HOH B O 1 HETATM 455 O O . HOH E 4 . ? -25.283 -2.985 -6.849 1.00 33.72 ? 134 HOH B O 1 HETATM 456 O O . HOH E 4 . ? -34.054 -4.488 -11.471 1.00 34.47 ? 135 HOH B O 1 HETATM 457 O O . HOH E 4 . ? -30.042 -4.907 -8.578 1.00 35.34 ? 136 HOH B O 1 HETATM 458 O O . HOH E 4 . ? -17.873 -3.202 -4.516 1.00 35.69 ? 137 HOH B O 1 HETATM 459 O O . HOH E 4 . ? -11.229 -2.197 3.627 1.00 38.32 ? 138 HOH B O 1 #
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